data_6EY1
#
_model_server_result.job_id            DOaLKs86XYE4lJqZhGN0oQ 
_model_server_result.datetime_utc      '2024-11-09 02:23:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ey1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    6EY1 
#
_exptl.entry_id    6EY1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.74 
_cell.angle_gamma         90 
_cell.entry_id            6EY1 
_cell.length_a            40.579 
_cell.length_b            59.413 
_cell.length_c            51.202 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EY1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 30 A CYS 73 1_555 A SG CYS 73 A CYS 116 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc1 A NE2 HIS 166 A HIS 209 1_555 F MN MN . A MN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc2 A OD1 ASP 168 A ASP 211 1_555 F MN MN . A MN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc3 A NE2 HIS 227 A HIS 270 1_555 F MN MN . A MN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc4 C O ACT . A ACT 402 1_555 F MN MN . A MN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc5 F MN MN . A MN 405 1_555 G O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc6 F MN MN . A MN 405 1_555 G O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     6EY1 
_atom_sites.fract_transf_matrix[1][1]    0.024643 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004674 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016831 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019879 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 401 4 ACT ACT . 
C 2 ACT A 1 402 5 ACT ACT . 
D 2 ACT A 1 403 6 ACT ACT . 
E 3 GOL A 1 404 2 GOL GOL . 
F 4 MN A 1 405 1 MN MN . 
G 5 HOH A 1 501 301 HOH HOH . 
G 5 HOH A 2 502 273 HOH HOH . 
G 5 HOH A 3 503 117 HOH HOH . 
G 5 HOH A 4 504 166 HOH HOH . 
G 5 HOH A 5 505 292 HOH HOH . 
G 5 HOH A 6 506 74 HOH HOH . 
G 5 HOH A 7 507 127 HOH HOH . 
G 5 HOH A 8 508 256 HOH HOH . 
G 5 HOH A 9 509 288 HOH HOH . 
G 5 HOH A 10 510 90 HOH HOH . 
G 5 HOH A 11 511 254 HOH HOH . 
G 5 HOH A 12 512 34 HOH HOH . 
G 5 HOH A 13 513 200 HOH HOH . 
G 5 HOH A 14 514 84 HOH HOH . 
G 5 HOH A 15 515 136 HOH HOH . 
G 5 HOH A 16 516 94 HOH HOH . 
G 5 HOH A 17 517 80 HOH HOH . 
G 5 HOH A 18 518 255 HOH HOH . 
G 5 HOH A 19 519 245 HOH HOH . 
G 5 HOH A 20 520 134 HOH HOH . 
G 5 HOH A 21 521 56 HOH HOH . 
G 5 HOH A 22 522 103 HOH HOH . 
G 5 HOH A 23 523 111 HOH HOH . 
G 5 HOH A 24 524 148 HOH HOH . 
G 5 HOH A 25 525 24 HOH HOH . 
G 5 HOH A 26 526 82 HOH HOH . 
G 5 HOH A 27 527 67 HOH HOH . 
G 5 HOH A 28 528 130 HOH HOH . 
G 5 HOH A 29 529 72 HOH HOH . 
G 5 HOH A 30 530 81 HOH HOH . 
G 5 HOH A 31 531 14 HOH HOH . 
G 5 HOH A 32 532 91 HOH HOH . 
G 5 HOH A 33 533 5 HOH HOH . 
G 5 HOH A 34 534 43 HOH HOH . 
G 5 HOH A 35 535 119 HOH HOH . 
G 5 HOH A 36 536 122 HOH HOH . 
G 5 HOH A 37 537 64 HOH HOH . 
G 5 HOH A 38 538 22 HOH HOH . 
G 5 HOH A 39 539 155 HOH HOH . 
G 5 HOH A 40 540 68 HOH HOH . 
G 5 HOH A 41 541 23 HOH HOH . 
G 5 HOH A 42 542 269 HOH HOH . 
G 5 HOH A 43 543 109 HOH HOH . 
G 5 HOH A 44 544 13 HOH HOH . 
G 5 HOH A 45 545 4 HOH HOH . 
G 5 HOH A 46 546 70 HOH HOH . 
G 5 HOH A 47 547 12 HOH HOH . 
G 5 HOH A 48 548 58 HOH HOH . 
G 5 HOH A 49 549 211 HOH HOH . 
G 5 HOH A 50 550 66 HOH HOH . 
G 5 HOH A 51 551 55 HOH HOH . 
G 5 HOH A 52 552 20 HOH HOH . 
G 5 HOH A 53 553 52 HOH HOH . 
G 5 HOH A 54 554 79 HOH HOH . 
G 5 HOH A 55 555 140 HOH HOH . 
G 5 HOH A 56 556 285 HOH HOH . 
G 5 HOH A 57 557 77 HOH HOH . 
G 5 HOH A 58 558 83 HOH HOH . 
G 5 HOH A 59 559 133 HOH HOH . 
G 5 HOH A 60 560 62 HOH HOH . 
G 5 HOH A 61 561 63 HOH HOH . 
G 5 HOH A 62 562 100 HOH HOH . 
G 5 HOH A 63 563 78 HOH HOH . 
G 5 HOH A 64 564 10 HOH HOH . 
G 5 HOH A 65 565 108 HOH HOH . 
G 5 HOH A 66 566 236 HOH HOH . 
G 5 HOH A 67 567 96 HOH HOH . 
G 5 HOH A 68 568 9 HOH HOH . 
G 5 HOH A 69 569 232 HOH HOH . 
G 5 HOH A 70 570 106 HOH HOH . 
G 5 HOH A 71 571 1 HOH HOH . 
G 5 HOH A 72 572 31 HOH HOH . 
G 5 HOH A 73 573 8 HOH HOH . 
G 5 HOH A 74 574 18 HOH HOH . 
G 5 HOH A 75 575 161 HOH HOH . 
G 5 HOH A 76 576 38 HOH HOH . 
G 5 HOH A 77 577 226 HOH HOH . 
G 5 HOH A 78 578 15 HOH HOH . 
G 5 HOH A 79 579 85 HOH HOH . 
G 5 HOH A 80 580 289 HOH HOH . 
G 5 HOH A 81 581 267 HOH HOH . 
G 5 HOH A 82 582 45 HOH HOH . 
G 5 HOH A 83 583 98 HOH HOH . 
G 5 HOH A 84 584 11 HOH HOH . 
G 5 HOH A 85 585 95 HOH HOH . 
G 5 HOH A 86 586 6 HOH HOH . 
G 5 HOH A 87 587 2 HOH HOH . 
G 5 HOH A 88 588 297 HOH HOH . 
G 5 HOH A 89 589 248 HOH HOH . 
G 5 HOH A 90 590 30 HOH HOH . 
G 5 HOH A 91 591 65 HOH HOH . 
G 5 HOH A 92 592 293 HOH HOH . 
G 5 HOH A 93 593 89 HOH HOH . 
G 5 HOH A 94 594 151 HOH HOH . 
G 5 HOH A 95 595 300 HOH HOH . 
G 5 HOH A 96 596 299 HOH HOH . 
G 5 HOH A 97 597 277 HOH HOH . 
G 5 HOH A 98 598 93 HOH HOH . 
G 5 HOH A 99 599 73 HOH HOH . 
G 5 HOH A 100 600 114 HOH HOH . 
G 5 HOH A 101 601 53 HOH HOH . 
G 5 HOH A 102 602 75 HOH HOH . 
G 5 HOH A 103 603 204 HOH HOH . 
G 5 HOH A 104 604 3 HOH HOH . 
G 5 HOH A 105 605 118 HOH HOH . 
G 5 HOH A 106 606 25 HOH HOH . 
G 5 HOH A 107 607 283 HOH HOH . 
G 5 HOH A 108 608 160 HOH HOH . 
G 5 HOH A 109 609 39 HOH HOH . 
G 5 HOH A 110 610 19 HOH HOH . 
G 5 HOH A 111 611 295 HOH HOH . 
G 5 HOH A 112 612 92 HOH HOH . 
G 5 HOH A 113 613 16 HOH HOH . 
G 5 HOH A 114 614 29 HOH HOH . 
G 5 HOH A 115 615 57 HOH HOH . 
G 5 HOH A 116 616 131 HOH HOH . 
G 5 HOH A 117 617 17 HOH HOH . 
G 5 HOH A 118 618 27 HOH HOH . 
G 5 HOH A 119 619 60 HOH HOH . 
G 5 HOH A 120 620 36 HOH HOH . 
G 5 HOH A 121 621 113 HOH HOH . 
G 5 HOH A 122 622 50 HOH HOH . 
G 5 HOH A 123 623 21 HOH HOH . 
G 5 HOH A 124 624 154 HOH HOH . 
G 5 HOH A 125 625 247 HOH HOH . 
G 5 HOH A 126 626 35 HOH HOH . 
G 5 HOH A 127 627 59 HOH HOH . 
G 5 HOH A 128 628 28 HOH HOH . 
G 5 HOH A 129 629 121 HOH HOH . 
G 5 HOH A 130 630 238 HOH HOH . 
G 5 HOH A 131 631 264 HOH HOH . 
G 5 HOH A 132 632 46 HOH HOH . 
G 5 HOH A 133 633 291 HOH HOH . 
G 5 HOH A 134 634 303 HOH HOH . 
G 5 HOH A 135 635 7 HOH HOH . 
G 5 HOH A 136 636 162 HOH HOH . 
G 5 HOH A 137 637 234 HOH HOH . 
G 5 HOH A 138 638 296 HOH HOH . 
G 5 HOH A 139 639 115 HOH HOH . 
G 5 HOH A 140 640 116 HOH HOH . 
G 5 HOH A 141 641 199 HOH HOH . 
G 5 HOH A 142 642 212 HOH HOH . 
G 5 HOH A 143 643 32 HOH HOH . 
G 5 HOH A 144 644 284 HOH HOH . 
G 5 HOH A 145 645 61 HOH HOH . 
G 5 HOH A 146 646 230 HOH HOH . 
G 5 HOH A 147 647 302 HOH HOH . 
G 5 HOH A 148 648 102 HOH HOH . 
G 5 HOH A 149 649 294 HOH HOH . 
G 5 HOH A 150 650 278 HOH HOH . 
G 5 HOH A 151 651 219 HOH HOH . 
G 5 HOH A 152 652 221 HOH HOH . 
G 5 HOH A 153 653 259 HOH HOH . 
G 5 HOH A 154 654 281 HOH HOH . 
G 5 HOH A 155 655 216 HOH HOH . 
G 5 HOH A 156 656 275 HOH HOH . 
G 5 HOH A 157 657 168 HOH HOH . 
G 5 HOH A 158 658 124 HOH HOH . 
G 5 HOH A 159 659 149 HOH HOH . 
G 5 HOH A 160 660 223 HOH HOH . 
G 5 HOH A 161 661 40 HOH HOH . 
G 5 HOH A 162 662 146 HOH HOH . 
G 5 HOH A 163 663 147 HOH HOH . 
G 5 HOH A 164 664 141 HOH HOH . 
G 5 HOH A 165 665 290 HOH HOH . 
G 5 HOH A 166 666 258 HOH HOH . 
G 5 HOH A 167 667 205 HOH HOH . 
G 5 HOH A 168 668 157 HOH HOH . 
G 5 HOH A 169 669 231 HOH HOH . 
G 5 HOH A 170 670 37 HOH HOH . 
G 5 HOH A 171 671 87 HOH HOH . 
G 5 HOH A 172 672 177 HOH HOH . 
G 5 HOH A 173 673 101 HOH HOH . 
G 5 HOH A 174 674 33 HOH HOH . 
G 5 HOH A 175 675 298 HOH HOH . 
G 5 HOH A 176 676 125 HOH HOH . 
G 5 HOH A 177 677 206 HOH HOH . 
G 5 HOH A 178 678 105 HOH HOH . 
G 5 HOH A 179 679 274 HOH HOH . 
G 5 HOH A 180 680 47 HOH HOH . 
G 5 HOH A 181 681 228 HOH HOH . 
G 5 HOH A 182 682 280 HOH HOH . 
G 5 HOH A 183 683 129 HOH HOH . 
G 5 HOH A 184 684 26 HOH HOH . 
G 5 HOH A 185 685 203 HOH HOH . 
G 5 HOH A 186 686 128 HOH HOH . 
G 5 HOH A 187 687 104 HOH HOH . 
G 5 HOH A 188 688 126 HOH HOH . 
G 5 HOH A 189 689 201 HOH HOH . 
G 5 HOH A 190 690 179 HOH HOH . 
G 5 HOH A 191 691 304 HOH HOH . 
G 5 HOH A 192 692 173 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 6.292 3.037 -35.27 1 53.48 ? C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . E 3 7.229 4.004 -35.622 1 63.25 ? O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . E 3 6.652 2.616 -33.831 1 39.66 ? C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . E 3 7.531 3.522 -33.251 1 36.01 ? O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . E 3 5.298 2.562 -33.092 1 27.29 ? C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . E 3 5.507 2.061 -31.826 1 15.21 ? O3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#