data_6EY2 # _model_server_result.job_id pArC8daJi896VN73vd82eQ _model_server_result.datetime_utc '2025-04-04 01:53:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ey2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":401}' # _entry.id 6EY2 # _exptl.entry_id 6EY2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation none _entity.pdbx_fragment SM _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6EY2 _cell.length_a 57.23 _cell.length_b 97.06 _cell.length_c 182.6 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EY2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 ? monomeric 1 author_defined_assembly 7 ? monomeric 1 author_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J,Y 1 1 B,K,L,Z 2 1 C,M,N,AA 3 1 D,O,P,BA 4 1 E,Q,R,CA 5 1 F,S,T,DA 6 1 G,U,V,EA 7 1 H,W,X,FA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 S N N ? 2 U N N ? 2 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 141 A CYS 351 1_555 G SG CYS 141 G CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf2 B SG CYS 141 B CYS 351 1_555 C SG CYS 141 C CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 D SG CYS 141 D CYS 351 1_555 F SG CYS 141 F CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 E SG CYS 141 E CYS 351 1_555 H SG CYS 141 H CYS 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc1 A SG CYS 90 A CYS 300 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc2 A SG CYS 93 A CYS 303 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 A NE2 HIS 110 A HIS 320 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc4 A SG CYS 117 A CYS 327 1_555 I ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc5 B SG CYS 90 B CYS 300 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc6 B SG CYS 93 B CYS 303 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc7 B NE2 HIS 110 B HIS 320 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc8 B SG CYS 117 B CYS 327 1_555 K ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc9 C SG CYS 90 C CYS 300 1_555 M ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc10 C SG CYS 93 C CYS 303 1_555 M ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc11 C NE2 HIS 110 C HIS 320 1_555 M ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc12 C SG CYS 117 C CYS 327 1_555 M ZN ZN . C ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc13 D SG CYS 90 D CYS 300 1_555 O ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc14 D SG CYS 93 D CYS 303 1_555 O ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc15 D NE2 HIS 110 D HIS 320 1_555 O ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc16 D SG CYS 117 D CYS 327 1_555 O ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc17 E SG CYS 90 E CYS 300 1_555 Q ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc18 E SG CYS 93 E CYS 303 1_555 Q ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc19 E NE2 HIS 110 E HIS 320 1_555 Q ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc20 E SG CYS 117 E CYS 327 1_555 Q ZN ZN . E ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc21 F SG CYS 90 F CYS 300 1_555 S ZN ZN . F ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc22 F SG CYS 93 F CYS 303 1_555 S ZN ZN . F ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc23 F NE2 HIS 110 F HIS 320 1_555 S ZN ZN . F ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc24 F SG CYS 117 F CYS 327 1_555 S ZN ZN . F ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc25 G SG CYS 90 G CYS 300 1_555 U ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc26 G SG CYS 93 G CYS 303 1_555 U ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc27 G NE2 HIS 110 G HIS 320 1_555 U ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc28 G SG CYS 117 G CYS 327 1_555 U ZN ZN . G ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc29 H SG CYS 90 H CYS 300 1_555 W ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc30 H SG CYS 93 H CYS 303 1_555 W ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc31 H NE2 HIS 110 H HIS 320 1_555 W ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc32 H SG CYS 117 H CYS 327 1_555 W ZN ZN . H ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6EY2 _atom_sites.fract_transf_matrix[1][1] 0.017473 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010303 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 ZN A 1 401 1 ZN ZN . J 3 C3T A 1 402 1 C3T DRG . K 2 ZN B 1 401 2 ZN ZN . L 3 C3T B 1 402 1 C3T DRG . M 2 ZN C 1 401 3 ZN ZN . N 3 C3T C 1 402 1 C3T DRG . O 2 ZN D 1 401 4 ZN ZN . P 3 C3T D 1 402 1 C3T DRG . Q 2 ZN E 1 401 5 ZN ZN . R 3 C3T E 1 402 1 C3T DRG . S 2 ZN F 1 401 6 ZN ZN . T 3 C3T F 1 402 1 C3T DRG . U 2 ZN G 1 401 2 ZN ZN . V 3 C3T G 1 402 1 C3T DRG . W 2 ZN H 1 401 8 ZN ZN . X 3 C3T H 1 402 1 C3T DRG . Y 4 HOH A 1 501 32 HOH HOH . Y 4 HOH A 2 502 95 HOH HOH . Y 4 HOH A 3 503 71 HOH HOH . Y 4 HOH A 4 504 111 HOH HOH . Y 4 HOH A 5 505 81 HOH HOH . Y 4 HOH A 6 506 145 HOH HOH . Y 4 HOH A 7 507 87 HOH HOH . Y 4 HOH A 8 508 65 HOH HOH . Y 4 HOH A 9 509 2 HOH HOH . Y 4 HOH A 10 510 84 HOH HOH . Y 4 HOH A 11 511 55 HOH HOH . Y 4 HOH A 12 512 132 HOH HOH . Y 4 HOH A 13 513 25 HOH HOH . Y 4 HOH A 14 514 22 HOH HOH . Y 4 HOH A 15 515 10 HOH HOH . Y 4 HOH A 16 516 1 HOH HOH . Y 4 HOH A 17 517 9 HOH HOH . Z 4 HOH B 1 501 116 HOH HOH . Z 4 HOH B 2 502 133 HOH HOH . Z 4 HOH B 3 503 137 HOH HOH . Z 4 HOH B 4 504 129 HOH HOH . Z 4 HOH B 5 505 122 HOH HOH . Z 4 HOH B 6 506 59 HOH HOH . Z 4 HOH B 7 507 6 HOH HOH . AA 4 HOH C 1 501 47 HOH HOH . AA 4 HOH C 2 502 112 HOH HOH . AA 4 HOH C 3 503 117 HOH HOH . AA 4 HOH C 4 504 64 HOH HOH . AA 4 HOH C 5 505 139 HOH HOH . AA 4 HOH C 6 506 60 HOH HOH . AA 4 HOH C 7 507 53 HOH HOH . AA 4 HOH C 8 508 11 HOH HOH . AA 4 HOH C 9 509 31 HOH HOH . AA 4 HOH C 10 510 29 HOH HOH . AA 4 HOH C 11 511 4 HOH HOH . AA 4 HOH C 12 512 8 HOH HOH . AA 4 HOH C 13 513 30 HOH HOH . BA 4 HOH D 1 501 142 HOH HOH . BA 4 HOH D 2 502 130 HOH HOH . BA 4 HOH D 3 503 34 HOH HOH . BA 4 HOH D 4 504 16 HOH HOH . BA 4 HOH D 5 505 33 HOH HOH . BA 4 HOH D 6 506 80 HOH HOH . BA 4 HOH D 7 507 138 HOH HOH . BA 4 HOH D 8 508 70 HOH HOH . BA 4 HOH D 9 509 78 HOH HOH . BA 4 HOH D 10 510 135 HOH HOH . BA 4 HOH D 11 511 36 HOH HOH . BA 4 HOH D 12 512 113 HOH HOH . BA 4 HOH D 13 513 52 HOH HOH . CA 4 HOH E 1 501 68 HOH HOH . CA 4 HOH E 2 502 114 HOH HOH . CA 4 HOH E 3 503 23 HOH HOH . CA 4 HOH E 4 504 44 HOH HOH . CA 4 HOH E 5 505 37 HOH HOH . CA 4 HOH E 6 506 140 HOH HOH . CA 4 HOH E 7 507 121 HOH HOH . CA 4 HOH E 8 508 120 HOH HOH . CA 4 HOH E 9 509 141 HOH HOH . CA 4 HOH E 10 510 102 HOH HOH . CA 4 HOH E 11 511 17 HOH HOH . CA 4 HOH E 12 512 82 HOH HOH . CA 4 HOH E 13 513 20 HOH HOH . CA 4 HOH E 14 514 38 HOH HOH . CA 4 HOH E 15 515 77 HOH HOH . CA 4 HOH E 16 516 54 HOH HOH . DA 4 HOH F 1 501 43 HOH HOH . DA 4 HOH F 2 502 89 HOH HOH . DA 4 HOH F 3 503 61 HOH HOH . DA 4 HOH F 4 504 18 HOH HOH . DA 4 HOH F 5 505 123 HOH HOH . DA 4 HOH F 6 506 134 HOH HOH . DA 4 HOH F 7 507 143 HOH HOH . EA 4 HOH G 1 501 131 HOH HOH . EA 4 HOH G 2 502 86 HOH HOH . EA 4 HOH G 3 503 144 HOH HOH . EA 4 HOH G 4 504 109 HOH HOH . EA 4 HOH G 5 505 39 HOH HOH . EA 4 HOH G 6 506 12 HOH HOH . FA 4 HOH H 1 501 76 HOH HOH . FA 4 HOH H 2 502 75 HOH HOH . FA 4 HOH H 3 503 128 HOH HOH . FA 4 HOH H 4 504 101 HOH HOH . FA 4 HOH H 5 505 50 HOH HOH . FA 4 HOH H 6 506 103 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.307 _atom_site.Cartn_y -9.514 _atom_site.Cartn_z -33.725 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.03 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #