data_6EYF
#
_model_server_result.job_id            FgxPu5lXLxzq5mekiJShpQ 
_model_server_result.datetime_utc      '2024-11-24 02:54:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6eyf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    6EYF 
#
_exptl.entry_id    6EYF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     3.1.1.8 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6EYF 
_cell.length_a            154.183 
_cell.length_b            154.183 
_cell.length_c            127.752 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6EYF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 63 A CYS 65 1_555 A SG CYS 90 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 250 A CYS 252 1_555 A SG CYS 261 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf3 A SG CYS 398 A CYS 400 1_555 A SG CYS 517 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
covale ? covale1 A ND2 ASN 55 A ASN 57 1_555 B C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale2 A ND2 ASN 104 A ASN 106 1_555 C C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
covale ? covale3 A C GLU 195 A GLU 197 1_555 A N BXT 196 A BXT 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C BXT 196 A BXT 198 1_555 A N ALA 197 A ALA 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 317 n n 
C1 O1 NAG sing 318 n n 
C1 O5 NAG sing 319 n n 
C1 H1 NAG sing 320 n n 
C2 C3 NAG sing 321 n n 
C2 N2 NAG sing 322 n n 
C2 H2 NAG sing 323 n n 
C3 C4 NAG sing 324 n n 
C3 O3 NAG sing 325 n n 
C3 H3 NAG sing 326 n n 
C4 C5 NAG sing 327 n n 
C4 O4 NAG sing 328 n n 
C4 H4 NAG sing 329 n n 
C5 C6 NAG sing 330 n n 
C5 O5 NAG sing 331 n n 
C5 H5 NAG sing 332 n n 
C6 O6 NAG sing 333 n n 
C6 H61 NAG sing 334 n n 
C6 H62 NAG sing 335 n n 
C7 C8 NAG sing 336 n n 
C7 N2 NAG sing 337 n n 
C7 O7 NAG doub 338 n n 
C8 H81 NAG sing 339 n n 
C8 H82 NAG sing 340 n n 
C8 H83 NAG sing 341 n n 
N2 HN2 NAG sing 342 n n 
O1 HO1 NAG sing 343 n n 
O3 HO3 NAG sing 344 n n 
O4 HO4 NAG sing 345 n n 
O6 HO6 NAG sing 346 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6EYF 
_atom_sites.fract_transf_matrix[1][1]    0.006486 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006486 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007828 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 601 601 NAG NAG . 
C 2 NAG A 1 602 602 NAG NAG . 
D 2 NAG A 1 603 603 NAG NAG . 
E 2 NAG A 1 604 604 NAG NAG . 
F 3 BY2 A 1 605 1 BY2 R11 . 
G 4 GOL A 1 606 2 GOL GOL . 
H 4 GOL A 1 607 3 GOL GOL . 
I 4 GOL A 1 608 4 GOL GOL . 
J 4 GOL A 1 609 5 GOL GOL . 
K 5 SO4 A 1 610 6 SO4 SO4 . 
L 6 HOH A 1 701 61 HOH HOH . 
L 6 HOH A 2 702 64 HOH HOH . 
L 6 HOH A 3 703 54 HOH HOH . 
L 6 HOH A 4 704 83 HOH HOH . 
L 6 HOH A 5 705 26 HOH HOH . 
L 6 HOH A 6 706 21 HOH HOH . 
L 6 HOH A 7 707 52 HOH HOH . 
L 6 HOH A 8 708 38 HOH HOH . 
L 6 HOH A 9 709 13 HOH HOH . 
L 6 HOH A 10 710 17 HOH HOH . 
L 6 HOH A 11 711 40 HOH HOH . 
L 6 HOH A 12 712 9 HOH HOH . 
L 6 HOH A 13 713 57 HOH HOH . 
L 6 HOH A 14 714 66 HOH HOH . 
L 6 HOH A 15 715 50 HOH HOH . 
L 6 HOH A 16 716 1 HOH HOH . 
L 6 HOH A 17 717 19 HOH HOH . 
L 6 HOH A 18 718 25 HOH HOH . 
L 6 HOH A 19 719 29 HOH HOH . 
L 6 HOH A 20 720 79 HOH HOH . 
L 6 HOH A 21 721 41 HOH HOH . 
L 6 HOH A 22 722 51 HOH HOH . 
L 6 HOH A 23 723 76 HOH HOH . 
L 6 HOH A 24 724 58 HOH HOH . 
L 6 HOH A 25 725 23 HOH HOH . 
L 6 HOH A 26 726 3 HOH HOH . 
L 6 HOH A 27 727 53 HOH HOH . 
L 6 HOH A 28 728 34 HOH HOH . 
L 6 HOH A 29 729 2 HOH HOH . 
L 6 HOH A 30 730 37 HOH HOH . 
L 6 HOH A 31 731 10 HOH HOH . 
L 6 HOH A 32 732 47 HOH HOH . 
L 6 HOH A 33 733 82 HOH HOH . 
L 6 HOH A 34 734 6 HOH HOH . 
L 6 HOH A 35 735 43 HOH HOH . 
L 6 HOH A 36 736 22 HOH HOH . 
L 6 HOH A 37 737 62 HOH HOH . 
L 6 HOH A 38 738 87 HOH HOH . 
L 6 HOH A 39 739 70 HOH HOH . 
L 6 HOH A 40 740 63 HOH HOH . 
L 6 HOH A 41 741 36 HOH HOH . 
L 6 HOH A 42 742 28 HOH HOH . 
L 6 HOH A 43 743 33 HOH HOH . 
L 6 HOH A 44 744 5 HOH HOH . 
L 6 HOH A 45 745 60 HOH HOH . 
L 6 HOH A 46 746 81 HOH HOH . 
L 6 HOH A 47 747 8 HOH HOH . 
L 6 HOH A 48 748 32 HOH HOH . 
L 6 HOH A 49 749 46 HOH HOH . 
L 6 HOH A 50 750 68 HOH HOH . 
L 6 HOH A 51 751 65 HOH HOH . 
L 6 HOH A 52 752 67 HOH HOH . 
L 6 HOH A 53 753 30 HOH HOH . 
L 6 HOH A 54 754 24 HOH HOH . 
L 6 HOH A 55 755 11 HOH HOH . 
L 6 HOH A 56 756 35 HOH HOH . 
L 6 HOH A 57 757 20 HOH HOH . 
L 6 HOH A 58 758 71 HOH HOH . 
L 6 HOH A 59 759 77 HOH HOH . 
L 6 HOH A 60 760 7 HOH HOH . 
L 6 HOH A 61 761 48 HOH HOH . 
L 6 HOH A 62 762 88 HOH HOH . 
L 6 HOH A 63 763 42 HOH HOH . 
L 6 HOH A 64 764 16 HOH HOH . 
L 6 HOH A 65 765 18 HOH HOH . 
L 6 HOH A 66 766 56 HOH HOH . 
L 6 HOH A 67 767 73 HOH HOH . 
L 6 HOH A 68 768 49 HOH HOH . 
L 6 HOH A 69 769 14 HOH HOH . 
L 6 HOH A 70 770 45 HOH HOH . 
L 6 HOH A 71 771 55 HOH HOH . 
L 6 HOH A 72 772 80 HOH HOH . 
L 6 HOH A 73 773 69 HOH HOH . 
L 6 HOH A 74 774 72 HOH HOH . 
L 6 HOH A 75 775 85 HOH HOH . 
L 6 HOH A 76 776 39 HOH HOH . 
L 6 HOH A 77 777 94 HOH HOH . 
L 6 HOH A 78 778 92 HOH HOH . 
L 6 HOH A 79 779 84 HOH HOH . 
L 6 HOH A 80 780 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . B 2 27.673 32.996 53.747 1 94.27 ? C1 NAG 601 A 1 
HETATM 2 C C2 NAG . . . B 2 28.47 32.924 55.041 1 100.26 ? C2 NAG 601 A 1 
HETATM 3 C C3 NAG . . . B 2 27.928 33.936 56.047 1 104.48 ? C3 NAG 601 A 1 
HETATM 4 C C4 NAG . . . B 2 27.908 35.339 55.446 1 106.71 ? C4 NAG 601 A 1 
HETATM 5 C C5 NAG . . . B 2 27.201 35.368 54.088 1 98.69 ? C5 NAG 601 A 1 
HETATM 6 C C6 NAG . . . B 2 27.42 36.672 53.35 1 93.32 ? C6 NAG 601 A 1 
HETATM 7 C C7 NAG . . . B 2 29.513 30.782 55.655 1 99.01 ? C7 NAG 601 A 1 
HETATM 8 C C8 NAG . . . B 2 29.289 29.424 56.252 1 94.2 ? C8 NAG 601 A 1 
HETATM 9 N N2 NAG . . . B 2 28.44 31.579 55.596 1 96.79 ? N2 NAG 601 A 1 
HETATM 10 O O3 NAG . . . B 2 28.758 33.918 57.204 1 103.12 ? O3 NAG 601 A 1 
HETATM 11 O O4 NAG . . . B 2 27.254 36.244 56.33 1 99.15 ? O4 NAG 601 A 1 
HETATM 12 O O5 NAG . . . B 2 27.715 34.338 53.227 1 103.88 ? O5 NAG 601 A 1 
HETATM 13 O O6 NAG . . . B 2 26.292 37.533 53.415 1 83.45 ? O6 NAG 601 A 1 
HETATM 14 O O7 NAG . . . B 2 30.615 31.142 55.248 1 102.06 ? O7 NAG 601 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#