data_6EZY # _model_server_result.job_id Ild9VXWOXlv55eVd3A2FlA _model_server_result.datetime_utc '2024-11-29 07:49:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ezy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6EZY # _exptl.entry_id 6EZY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 323.323 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-Hydroxy-Glutathione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6EZY _cell.length_a 114.125 _cell.length_b 114.125 _cell.length_c 89.81 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6EZY _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O7 S' _chem_comp.formula_weight 323.323 _chem_comp.id GS8 _chem_comp.mon_nstd_flag . _chem_comp.name S-Hydroxy-Glutathione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C3 GS8 sing 129 n n C3 O32 GS8 doub 130 n n C3 CA3 GS8 sing 131 n n CA3 N3 GS8 sing 132 n n N3 C2 GS8 sing 133 n n C2 O2 GS8 doub 134 n n C2 CA2 GS8 sing 135 n n CA2 CB2 GS8 sing 136 n n CA2 N2 GS8 sing 137 n n CB2 SG2 GS8 sing 138 n n SG2 O13 GS8 sing 139 n n N2 CD1 GS8 sing 140 n n CD1 OE1 GS8 doub 141 n n CD1 CG1 GS8 sing 142 n n CG1 CB1 GS8 sing 143 n n CB1 CA1 GS8 sing 144 n n CA1 N1 GS8 sing 145 n n CA1 C1 GS8 sing 146 n n C1 O11 GS8 sing 147 n n C1 O12 GS8 doub 148 n n O31 H31 GS8 sing 149 n n CA3 HA31 GS8 sing 150 n n CA3 HA32 GS8 sing 151 n n N3 H3 GS8 sing 152 n n CA2 HA2 GS8 sing 153 n n CB2 HB21 GS8 sing 154 n n CB2 HB22 GS8 sing 155 n n N2 H2 GS8 sing 156 n n O13 H13 GS8 sing 157 n n CG1 HG11 GS8 sing 158 n n CG1 HG12 GS8 sing 159 n n CB1 HB11 GS8 sing 160 n n CB1 HB12 GS8 sing 161 n n CA1 HA1 GS8 sing 162 n n N1 H11N GS8 sing 163 n n N1 H12N GS8 sing 164 n n O11 H11 GS8 sing 165 n n # _atom_sites.entry_id 6EZY _atom_sites.fract_transf_matrix[1][1] 0.008762 _atom_sites.fract_transf_matrix[1][2] 0.005059 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 301 1213 GOL GOL . D 3 BR A 1 302 1214 BR BR . E 4 GSH B 1 301 1214 GSH GSH . F 5 GS8 B 1 302 1215 GS8 GS8 . G 3 BR B 1 303 1216 BR BR . H 6 HOH A 1 401 2080 HOH HOH . H 6 HOH A 2 402 2103 HOH HOH . H 6 HOH A 3 403 2010 HOH HOH . H 6 HOH A 4 404 2001 HOH HOH . H 6 HOH A 5 405 2099 HOH HOH . H 6 HOH A 6 406 2064 HOH HOH . H 6 HOH A 7 407 2066 HOH HOH . H 6 HOH A 8 408 2107 HOH HOH . H 6 HOH A 9 409 2069 HOH HOH . H 6 HOH A 10 410 2097 HOH HOH . H 6 HOH A 11 411 2079 HOH HOH . H 6 HOH A 12 412 2055 HOH HOH . H 6 HOH A 13 413 2075 HOH HOH . H 6 HOH A 14 414 2005 HOH HOH . H 6 HOH A 15 415 2032 HOH HOH . H 6 HOH A 16 416 2031 HOH HOH . H 6 HOH A 17 417 2006 HOH HOH . H 6 HOH A 18 418 2016 HOH HOH . H 6 HOH A 19 419 2002 HOH HOH . H 6 HOH A 20 420 2036 HOH HOH . H 6 HOH A 21 421 2108 HOH HOH . H 6 HOH A 22 422 2047 HOH HOH . H 6 HOH A 23 423 2056 HOH HOH . H 6 HOH A 24 424 2082 HOH HOH . H 6 HOH A 25 425 2090 HOH HOH . H 6 HOH A 26 426 2118 HOH HOH . H 6 HOH A 27 427 2024 HOH HOH . H 6 HOH A 28 428 2043 HOH HOH . H 6 HOH A 29 429 2093 HOH HOH . H 6 HOH A 30 430 2058 HOH HOH . H 6 HOH A 31 431 2015 HOH HOH . H 6 HOH A 32 432 2062 HOH HOH . H 6 HOH A 33 433 2117 HOH HOH . H 6 HOH A 34 434 2008 HOH HOH . H 6 HOH A 35 435 2059 HOH HOH . H 6 HOH A 36 436 2084 HOH HOH . H 6 HOH A 37 437 2033 HOH HOH . H 6 HOH A 38 438 2071 HOH HOH . H 6 HOH A 39 439 2063 HOH HOH . H 6 HOH A 40 440 2014 HOH HOH . H 6 HOH A 41 441 2086 HOH HOH . H 6 HOH A 42 442 2081 HOH HOH . H 6 HOH A 43 443 2067 HOH HOH . H 6 HOH A 44 444 2070 HOH HOH . H 6 HOH A 45 445 2060 HOH HOH . H 6 HOH A 46 446 2106 HOH HOH . H 6 HOH A 47 447 2085 HOH HOH . H 6 HOH A 48 448 2116 HOH HOH . H 6 HOH A 49 449 2022 HOH HOH . H 6 HOH A 50 450 2036 HOH HOH . H 6 HOH A 51 451 2029 HOH HOH . H 6 HOH A 52 452 2092 HOH HOH . H 6 HOH A 53 453 2088 HOH HOH . H 6 HOH A 54 454 2096 HOH HOH . H 6 HOH A 55 455 2051 HOH HOH . H 6 HOH A 56 456 2115 HOH HOH . H 6 HOH A 57 457 2111 HOH HOH . H 6 HOH A 58 458 2110 HOH HOH . H 6 HOH A 59 459 2095 HOH HOH . H 6 HOH A 60 460 2112 HOH HOH . H 6 HOH A 61 461 2078 HOH HOH . H 6 HOH A 62 462 2003 HOH HOH . H 6 HOH A 63 463 2083 HOH HOH . H 6 HOH A 64 464 2073 HOH HOH . H 6 HOH A 65 465 2025 HOH HOH . H 6 HOH A 66 466 2091 HOH HOH . H 6 HOH A 67 467 2046 HOH HOH . H 6 HOH A 68 468 2061 HOH HOH . H 6 HOH A 69 469 2004 HOH HOH . H 6 HOH A 70 470 2104 HOH HOH . H 6 HOH A 71 471 2089 HOH HOH . H 6 HOH A 72 472 2027 HOH HOH . H 6 HOH A 73 473 2019 HOH HOH . H 6 HOH A 74 474 2105 HOH HOH . H 6 HOH A 75 475 2072 HOH HOH . H 6 HOH A 76 476 2018 HOH HOH . H 6 HOH A 77 477 2102 HOH HOH . H 6 HOH A 78 478 2045 HOH HOH . H 6 HOH A 79 479 2094 HOH HOH . H 6 HOH A 80 480 2101 HOH HOH . H 6 HOH A 81 481 2039 HOH HOH . H 6 HOH A 82 482 2017 HOH HOH . H 6 HOH A 83 483 2041 HOH HOH . H 6 HOH A 84 484 2030 HOH HOH . H 6 HOH A 85 485 2113 HOH HOH . H 6 HOH A 86 486 2077 HOH HOH . H 6 HOH A 87 487 2100 HOH HOH . H 6 HOH A 88 488 2034 HOH HOH . H 6 HOH A 89 489 2098 HOH HOH . H 6 HOH A 90 490 2114 HOH HOH . H 6 HOH A 91 491 2109 HOH HOH . H 6 HOH A 92 492 2028 HOH HOH . H 6 HOH A 93 493 2009 HOH HOH . H 6 HOH A 94 494 2013 HOH HOH . H 6 HOH A 95 495 2057 HOH HOH . H 6 HOH A 96 496 2050 HOH HOH . H 6 HOH A 97 497 2040 HOH HOH . H 6 HOH A 98 498 2087 HOH HOH . H 6 HOH A 99 499 2052 HOH HOH . H 6 HOH A 100 500 2007 HOH HOH . H 6 HOH A 101 501 2012 HOH HOH . H 6 HOH A 102 502 2037 HOH HOH . H 6 HOH A 103 503 2026 HOH HOH . H 6 HOH A 104 504 2035 HOH HOH . H 6 HOH A 105 505 2038 HOH HOH . H 6 HOH A 106 506 2020 HOH HOH . H 6 HOH A 107 507 2011 HOH HOH . H 6 HOH A 108 508 2021 HOH HOH . H 6 HOH A 109 509 2023 HOH HOH . H 6 HOH A 110 510 2053 HOH HOH . I 6 HOH B 1 2001 2001 HOH HOH . I 6 HOH B 2 2002 2087 HOH HOH . I 6 HOH B 3 2003 2076 HOH HOH . I 6 HOH B 4 2004 2080 HOH HOH . I 6 HOH B 5 2005 2030 HOH HOH . I 6 HOH B 6 2006 2064 HOH HOH . I 6 HOH B 7 2007 2026 HOH HOH . I 6 HOH B 8 2008 2010 HOH HOH . I 6 HOH B 9 2009 2008 HOH HOH . I 6 HOH B 10 2010 2098 HOH HOH . I 6 HOH B 11 2011 2018 HOH HOH . I 6 HOH B 12 2012 2022 HOH HOH . I 6 HOH B 13 2013 2024 HOH HOH . I 6 HOH B 14 2014 2016 HOH HOH . I 6 HOH B 15 2015 2049 HOH HOH . I 6 HOH B 16 2016 2005 HOH HOH . I 6 HOH B 17 2017 2044 HOH HOH . I 6 HOH B 18 2018 2042 HOH HOH . I 6 HOH B 19 2019 2066 HOH HOH . I 6 HOH B 20 2020 2093 HOH HOH . I 6 HOH B 21 2021 2074 HOH HOH . I 6 HOH B 22 2022 2011 HOH HOH . I 6 HOH B 23 2023 2071 HOH HOH . I 6 HOH B 24 2024 2048 HOH HOH . I 6 HOH B 25 2025 2084 HOH HOH . I 6 HOH B 26 2026 2054 HOH HOH . I 6 HOH B 27 2027 2088 HOH HOH . I 6 HOH B 28 2028 2046 HOH HOH . I 6 HOH B 29 2029 2023 HOH HOH . I 6 HOH B 30 2030 2065 HOH HOH . I 6 HOH B 31 2031 2032 HOH HOH . I 6 HOH B 32 2032 2074 HOH HOH . I 6 HOH B 33 2033 2007 HOH HOH . I 6 HOH B 34 2034 2077 HOH HOH . I 6 HOH B 35 2035 2054 HOH HOH . I 6 HOH B 36 2036 2012 HOH HOH . I 6 HOH B 37 2037 2047 HOH HOH . I 6 HOH B 38 2038 2086 HOH HOH . I 6 HOH B 39 2039 2096 HOH HOH . I 6 HOH B 40 2040 2057 HOH HOH . I 6 HOH B 41 2041 2068 HOH HOH . I 6 HOH B 42 2042 2015 HOH HOH . I 6 HOH B 43 2043 2065 HOH HOH . I 6 HOH B 44 2044 2095 HOH HOH . I 6 HOH B 45 2045 2052 HOH HOH . I 6 HOH B 46 2046 2063 HOH HOH . I 6 HOH B 47 2047 2029 HOH HOH . I 6 HOH B 48 2048 2038 HOH HOH . I 6 HOH B 49 2049 2004 HOH HOH . I 6 HOH B 50 2050 2031 HOH HOH . I 6 HOH B 51 2051 2090 HOH HOH . I 6 HOH B 52 2052 2059 HOH HOH . I 6 HOH B 53 2053 2075 HOH HOH . I 6 HOH B 54 2054 2049 HOH HOH . I 6 HOH B 55 2055 2085 HOH HOH . I 6 HOH B 56 2056 2056 HOH HOH . I 6 HOH B 57 2057 2028 HOH HOH . I 6 HOH B 58 2058 2037 HOH HOH . I 6 HOH B 59 2059 2020 HOH HOH . I 6 HOH B 60 2060 2044 HOH HOH . I 6 HOH B 61 2061 2055 HOH HOH . I 6 HOH B 62 2062 2073 HOH HOH . I 6 HOH B 63 2063 2051 HOH HOH . I 6 HOH B 64 2064 2089 HOH HOH . I 6 HOH B 65 2065 2014 HOH HOH . I 6 HOH B 66 2066 2072 HOH HOH . I 6 HOH B 67 2067 2021 HOH HOH . I 6 HOH B 68 2068 2069 HOH HOH . I 6 HOH B 69 2069 2019 HOH HOH . I 6 HOH B 70 2070 2061 HOH HOH . I 6 HOH B 71 2071 2076 HOH HOH . I 6 HOH B 72 2072 2081 HOH HOH . I 6 HOH B 73 2073 2025 HOH HOH . I 6 HOH B 74 2074 2079 HOH HOH . I 6 HOH B 75 2075 2013 HOH HOH . I 6 HOH B 76 2076 2070 HOH HOH . I 6 HOH B 77 2077 2094 HOH HOH . I 6 HOH B 78 2078 2006 HOH HOH . I 6 HOH B 79 2079 2083 HOH HOH . I 6 HOH B 80 2080 2053 HOH HOH . I 6 HOH B 81 2081 2058 HOH HOH . I 6 HOH B 82 2082 2041 HOH HOH . I 6 HOH B 83 2083 2045 HOH HOH . I 6 HOH B 84 2084 2078 HOH HOH . I 6 HOH B 85 2085 2048 HOH HOH . I 6 HOH B 86 2086 2091 HOH HOH . I 6 HOH B 87 2087 2027 HOH HOH . I 6 HOH B 88 2088 2050 HOH HOH . I 6 HOH B 89 2089 2067 HOH HOH . I 6 HOH B 90 2090 2062 HOH HOH . I 6 HOH B 91 2091 2017 HOH HOH . I 6 HOH B 92 2092 2039 HOH HOH . I 6 HOH B 93 2093 2060 HOH HOH . I 6 HOH B 94 2094 2082 HOH HOH . I 6 HOH B 95 2095 2068 HOH HOH . I 6 HOH B 96 2096 2092 HOH HOH . I 6 HOH B 97 2097 2042 HOH HOH . I 6 HOH B 98 2098 2097 HOH HOH . I 6 HOH B 99 2099 2040 HOH HOH . I 6 HOH B 100 2100 2002 HOH HOH . I 6 HOH B 101 2101 2033 HOH HOH . I 6 HOH B 102 2102 2035 HOH HOH . I 6 HOH B 103 2103 2003 HOH HOH . I 6 HOH B 104 2104 2034 HOH HOH . I 6 HOH B 105 2105 2043 HOH HOH . I 6 HOH B 106 2106 2009 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CB1 GS8 . . . F 5 -36.5 55.185 6.18 1 105.73 ? CB1 GS8 302 B 1 HETATM 2 C CG1 GS8 . . . F 5 -37.941 55.839 6.108 1 49.46 ? CG1 GS8 302 B 1 HETATM 3 C CD1 GS8 . . . F 5 -38.094 57.082 7.028 1 108.47 ? CD1 GS8 302 B 1 HETATM 4 O OE1 GS8 . . . F 5 -38.138 56.952 8.261 1 112.17 ? OE1 GS8 302 B 1 HETATM 5 C C1 GS8 . . . F 5 -35.86 54.214 8.707 1 78.79 ? C1 GS8 302 B 1 HETATM 6 O O11 GS8 . . . F 5 -36.481 55.122 9.319 1 78.48 -1 O11 GS8 302 B 1 HETATM 7 O O12 GS8 . . . F 5 -34.975 53.477 9.215 1 76.26 ? O12 GS8 302 B 1 HETATM 8 N N1 GS8 . . . F 5 -37.296 52.924 7.108 1 94.95 ? N1 GS8 302 B 1 HETATM 9 C CA1 GS8 . . . F 5 -36.203 53.907 7.157 1 89.8 ? CA1 GS8 302 B 1 HETATM 10 N N2 GS8 . . . F 5 -38.199 58.381 6.401 1 101.77 ? N2 GS8 302 B 1 HETATM 11 C CA2 GS8 . . . F 5 -38.327 59.781 7.061 1 87.39 ? CA2 GS8 302 B 1 HETATM 12 C CB2 GS8 . . . F 5 -39.612 60.562 6.592 1 100.56 ? CB2 GS8 302 B 1 HETATM 13 S SG2 GS8 . . . F 5 -39.166 61.385 4.954 1 81.87 ? SG2 GS8 302 B 1 HETATM 14 O O13 GS8 . . . F 5 -40.077 62.805 4.935 1 26.27 ? O13 GS8 302 B 1 HETATM 15 C C2 GS8 . . . F 5 -38.099 59.706 8.692 1 82.22 ? C2 GS8 302 B 1 HETATM 16 O O2 GS8 . . . F 5 -37.049 59.205 9.133 1 84.91 ? O2 GS8 302 B 1 HETATM 17 N N3 GS8 . . . F 5 -38.981 60.2 9.586 1 76.04 ? N3 GS8 302 B 1 HETATM 18 C CA3 GS8 . . . F 5 -38.558 60.039 11.001 1 67.27 ? CA3 GS8 302 B 1 HETATM 19 C C3 GS8 . . . F 5 -39.105 61.154 11.947 1 78.34 ? C3 GS8 302 B 1 HETATM 20 O O32 GS8 . . . F 5 -39.227 62.338 11.541 1 68.97 ? O32 GS8 302 B 1 HETATM 21 O O31 GS8 . . . F 5 -39.395 60.771 13.098 1 92.6 -1 O31 GS8 302 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #