data_6F01 # _model_server_result.job_id NrFk3Lem3q8oQGveUryk5Q _model_server_result.datetime_utc '2024-11-22 04:05:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f01 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6F01 # _exptl.entry_id 6F01 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6F01 _cell.length_a 114.76 _cell.length_b 114.76 _cell.length_c 90.31 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 6F01 _atom_sites.fract_transf_matrix[1][1] 0.008714 _atom_sites.fract_transf_matrix[1][2] 0.005031 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 301 1214 GOL GOL . D 3 BR A 1 302 1215 BR BR . E 4 GTS B 1 301 1214 GTS GTS . F 2 GOL B 1 302 1215 GOL GOL . G 5 GS8 B 1 303 1216 GS8 GS8 . H 3 BR B 1 304 1217 BR BR . I 6 HOH A 1 401 2003 HOH HOH . I 6 HOH A 2 402 2079 HOH HOH . I 6 HOH A 3 403 2007 HOH HOH . I 6 HOH A 4 404 2028 HOH HOH . I 6 HOH A 5 405 2056 HOH HOH . I 6 HOH A 6 406 2017 HOH HOH . I 6 HOH A 7 407 2040 HOH HOH . I 6 HOH A 8 408 2043 HOH HOH . I 6 HOH A 9 409 2052 HOH HOH . I 6 HOH A 10 410 2055 HOH HOH . I 6 HOH A 11 411 2080 HOH HOH . I 6 HOH A 12 412 2026 HOH HOH . I 6 HOH A 13 413 2083 HOH HOH . I 6 HOH A 14 414 2006 HOH HOH . I 6 HOH A 15 415 2070 HOH HOH . I 6 HOH A 16 416 2060 HOH HOH . I 6 HOH A 17 417 2027 HOH HOH . I 6 HOH A 18 418 2057 HOH HOH . I 6 HOH A 19 419 2005 HOH HOH . I 6 HOH A 20 420 2087 HOH HOH . I 6 HOH A 21 421 2081 HOH HOH . I 6 HOH A 22 422 2012 HOH HOH . I 6 HOH A 23 423 2063 HOH HOH . I 6 HOH A 24 424 2084 HOH HOH . I 6 HOH A 25 425 2090 HOH HOH . I 6 HOH A 26 426 2062 HOH HOH . I 6 HOH A 27 427 2029 HOH HOH . I 6 HOH A 28 428 2069 HOH HOH . I 6 HOH A 29 429 2037 HOH HOH . I 6 HOH A 30 430 2024 HOH HOH . I 6 HOH A 31 431 2013 HOH HOH . I 6 HOH A 32 432 2020 HOH HOH . I 6 HOH A 33 433 2039 HOH HOH . I 6 HOH A 34 434 2089 HOH HOH . I 6 HOH A 35 435 2046 HOH HOH . I 6 HOH A 36 436 2073 HOH HOH . I 6 HOH A 37 437 2004 HOH HOH . I 6 HOH A 38 438 2066 HOH HOH . I 6 HOH A 39 439 2072 HOH HOH . I 6 HOH A 40 440 2068 HOH HOH . I 6 HOH A 41 441 2045 HOH HOH . I 6 HOH A 42 442 2011 HOH HOH . I 6 HOH A 43 443 2035 HOH HOH . I 6 HOH A 44 444 2049 HOH HOH . I 6 HOH A 45 445 2059 HOH HOH . I 6 HOH A 46 446 2001 HOH HOH . I 6 HOH A 47 447 2041 HOH HOH . I 6 HOH A 48 448 2023 HOH HOH . I 6 HOH A 49 449 2047 HOH HOH . I 6 HOH A 50 450 2064 HOH HOH . I 6 HOH A 51 451 2076 HOH HOH . I 6 HOH A 52 452 2088 HOH HOH . I 6 HOH A 53 453 2048 HOH HOH . I 6 HOH A 54 454 2074 HOH HOH . I 6 HOH A 55 455 2016 HOH HOH . I 6 HOH A 56 456 2010 HOH HOH . I 6 HOH A 57 457 2071 HOH HOH . I 6 HOH A 58 458 2051 HOH HOH . I 6 HOH A 59 459 2054 HOH HOH . I 6 HOH A 60 460 2025 HOH HOH . I 6 HOH A 61 461 2061 HOH HOH . I 6 HOH A 62 462 2018 HOH HOH . I 6 HOH A 63 463 2078 HOH HOH . I 6 HOH A 64 464 2067 HOH HOH . I 6 HOH A 65 465 2082 HOH HOH . I 6 HOH A 66 466 2038 HOH HOH . I 6 HOH A 67 467 2075 HOH HOH . I 6 HOH A 68 468 2044 HOH HOH . I 6 HOH A 69 469 2029 HOH HOH . I 6 HOH A 70 470 2085 HOH HOH . I 6 HOH A 71 471 2002 HOH HOH . I 6 HOH A 72 472 2032 HOH HOH . I 6 HOH A 73 473 2086 HOH HOH . I 6 HOH A 74 474 2058 HOH HOH . I 6 HOH A 75 475 2077 HOH HOH . I 6 HOH A 76 476 2065 HOH HOH . I 6 HOH A 77 477 2008 HOH HOH . I 6 HOH A 78 478 2022 HOH HOH . I 6 HOH A 79 479 2019 HOH HOH . I 6 HOH A 80 480 2030 HOH HOH . I 6 HOH A 81 481 2021 HOH HOH . I 6 HOH A 82 482 2009 HOH HOH . I 6 HOH A 83 483 2031 HOH HOH . J 6 HOH B 1 2001 2001 HOH HOH . J 6 HOH B 2 2002 2011 HOH HOH . J 6 HOH B 3 2003 2058 HOH HOH . J 6 HOH B 4 2004 2053 HOH HOH . J 6 HOH B 5 2005 2019 HOH HOH . J 6 HOH B 6 2006 2009 HOH HOH . J 6 HOH B 7 2007 2034 HOH HOH . J 6 HOH B 8 2008 2021 HOH HOH . J 6 HOH B 9 2009 2008 HOH HOH . J 6 HOH B 10 2010 2024 HOH HOH . J 6 HOH B 11 2011 2036 HOH HOH . J 6 HOH B 12 2012 2044 HOH HOH . J 6 HOH B 13 2013 2045 HOH HOH . J 6 HOH B 14 2014 2042 HOH HOH . J 6 HOH B 15 2015 2068 HOH HOH . J 6 HOH B 16 2016 2028 HOH HOH . J 6 HOH B 17 2017 2042 HOH HOH . J 6 HOH B 18 2018 2069 HOH HOH . J 6 HOH B 19 2019 2062 HOH HOH . J 6 HOH B 20 2020 2050 HOH HOH . J 6 HOH B 21 2021 2063 HOH HOH . J 6 HOH B 22 2022 2070 HOH HOH . J 6 HOH B 23 2023 2034 HOH HOH . J 6 HOH B 24 2024 2005 HOH HOH . J 6 HOH B 25 2025 2035 HOH HOH . J 6 HOH B 26 2026 2010 HOH HOH . J 6 HOH B 27 2027 2025 HOH HOH . J 6 HOH B 28 2028 2059 HOH HOH . J 6 HOH B 29 2029 2026 HOH HOH . J 6 HOH B 30 2030 2033 HOH HOH . J 6 HOH B 31 2031 2033 HOH HOH . J 6 HOH B 32 2032 2038 HOH HOH . J 6 HOH B 33 2033 2020 HOH HOH . J 6 HOH B 34 2034 2039 HOH HOH . J 6 HOH B 35 2035 2027 HOH HOH . J 6 HOH B 36 2036 2052 HOH HOH . J 6 HOH B 37 2037 2071 HOH HOH . J 6 HOH B 38 2038 2013 HOH HOH . J 6 HOH B 39 2039 2018 HOH HOH . J 6 HOH B 40 2040 2016 HOH HOH . J 6 HOH B 41 2041 2064 HOH HOH . J 6 HOH B 42 2042 2002 HOH HOH . J 6 HOH B 43 2043 2022 HOH HOH . J 6 HOH B 44 2044 2031 HOH HOH . J 6 HOH B 45 2045 2023 HOH HOH . J 6 HOH B 46 2046 2048 HOH HOH . J 6 HOH B 47 2047 2015 HOH HOH . J 6 HOH B 48 2048 2030 HOH HOH . J 6 HOH B 49 2049 2054 HOH HOH . J 6 HOH B 50 2050 2056 HOH HOH . J 6 HOH B 51 2051 2003 HOH HOH . J 6 HOH B 52 2052 2065 HOH HOH . J 6 HOH B 53 2053 2036 HOH HOH . J 6 HOH B 54 2054 2051 HOH HOH . J 6 HOH B 55 2055 2061 HOH HOH . J 6 HOH B 56 2056 2041 HOH HOH . J 6 HOH B 57 2057 2012 HOH HOH . J 6 HOH B 58 2058 2017 HOH HOH . J 6 HOH B 59 2059 2040 HOH HOH . J 6 HOH B 60 2060 2057 HOH HOH . J 6 HOH B 61 2061 2046 HOH HOH . J 6 HOH B 62 2062 2066 HOH HOH . J 6 HOH B 63 2063 2037 HOH HOH . J 6 HOH B 64 2064 2060 HOH HOH . J 6 HOH B 65 2065 2067 HOH HOH . J 6 HOH B 66 2066 2032 HOH HOH . J 6 HOH B 67 2067 2050 HOH HOH . J 6 HOH B 68 2068 2014 HOH HOH . J 6 HOH B 69 2069 2043 HOH HOH . J 6 HOH B 70 2070 2047 HOH HOH . J 6 HOH B 71 2071 2053 HOH HOH . J 6 HOH B 72 2072 2055 HOH HOH . J 6 HOH B 73 2073 2006 HOH HOH . J 6 HOH B 74 2074 2015 HOH HOH . J 6 HOH B 75 2075 2004 HOH HOH . J 6 HOH B 76 2076 2014 HOH HOH . J 6 HOH B 77 2077 2049 HOH HOH . J 6 HOH B 78 2078 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 2 -58.602 71.122 -10.784 1 76.56 ? C1 GOL 302 B 1 HETATM 2 O O1 GOL . . . F 2 -57.925 72.348 -10.963 1 78.59 ? O1 GOL 302 B 1 HETATM 3 C C2 GOL . . . F 2 -58.597 70.353 -12.099 1 77.17 ? C2 GOL 302 B 1 HETATM 4 O O2 GOL . . . F 2 -58.637 71.269 -13.172 1 83.97 ? O2 GOL 302 B 1 HETATM 5 C C3 GOL . . . F 2 -59.763 69.365 -12.197 1 72.67 ? C3 GOL 302 B 1 HETATM 6 O O3 GOL . . . F 2 -61.015 69.987 -11.982 1 70.98 ? O3 GOL 302 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #