data_6F0K # _model_server_result.job_id uaFq-OyBM_aNTgnoGO1rVA _model_server_result.datetime_utc '2025-03-06 07:22:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f0k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1103}' # _entry.id 6F0K # _exptl.entry_id 6F0K _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 351.64 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6F0K _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F0K _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 N N N ? 10 O N N ? 10 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 61 A CYS 61 1_555 K CAB HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? covale ? covale2 A SG CYS 64 A CYS 64 1_555 K CAC HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? covale ? covale3 A SG CYS 82 A CYS 82 1_555 L CAB HEC . A HEC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? covale ? covale4 A SG CYS 85 A CYS 85 1_555 L CAC HEC . A HEC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? covale ? covale5 A SG CYS 135 A CYS 135 1_555 J CAB HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.773 ? covale ? covale6 A SG CYS 138 A CYS 138 1_555 J CAC HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? covale ? covale7 A SG CYS 159 A CYS 159 1_555 I CAB HEC . A HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale8 A SG CYS 162 A CYS 162 1_555 I CAC HEC . A HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.771 ? covale ? covale9 A SG CYS 206 A CYS 206 1_555 H CAB HEC . A HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale10 A SG CYS 209 A CYS 209 1_555 H CAC HEC . A HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? covale ? covale11 E SG CYS 114 E CYS 114 1_555 Q CAB HEC . E HEC 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.768 ? metalc ? metalc1 A NE2 HIS 50 A HIS 50 1_555 K FE HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A NE2 HIS 53 A HIS 53 1_555 L FE HEC . A HEC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc3 A NE2 HIS 65 A HIS 65 1_555 K FE HEC . A HEC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc4 A NE2 HIS 86 A HIS 86 1_555 L FE HEC . A HEC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc5 A NE2 HIS 125 A HIS 125 1_555 J FE HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc6 A NE2 HIS 128 A HIS 128 1_555 I FE HEC . A HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc7 A NE2 HIS 139 A HIS 139 1_555 J FE HEC . A HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc8 A SD MET 156 A MET 156 1_555 H FE HEC . A HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc9 A NE2 HIS 163 A HIS 163 1_555 I FE HEC . A HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc10 A NE2 HIS 210 A HIS 210 1_555 H FE HEC . A HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc11 B SG CYS 807 B CYS 807 1_555 P FE4 SF4 . B SF4 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc12 B SG CYS 810 B CYS 810 1_555 P FE1 SF4 . B SF4 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc13 B SG CYS 813 B CYS 813 1_555 P FE3 SF4 . B SF4 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc14 B SG CYS 817 B CYS 817 1_555 O FE3 SF4 . B SF4 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc15 B SG CYS 865 B CYS 865 1_555 N FE1 SF4 . B SF4 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc16 B O MET 866 B MET 866 1_555 N FE1 SF4 . B SF4 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc17 B SG CYS 868 B CYS 868 1_555 N FE4 SF4 . B SF4 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc18 B SG CYS 873 B CYS 873 1_555 N FE2 SF4 . B SF4 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc19 B SG CYS 877 B CYS 877 1_555 M FE1 F3S . B F3S 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc20 B SG CYS 897 B CYS 897 1_555 M FE3 F3S . B F3S 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc21 B SG CYS 903 B CYS 903 1_555 M FE1 F3S . B F3S 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc22 B SG CYS 903 B CYS 903 1_555 M FE4 F3S . B F3S 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc23 B SG CYS 907 B CYS 907 1_555 N FE3 SF4 . B SF4 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc24 B SG CYS 946 B CYS 946 1_555 O FE4 SF4 . B SF4 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc25 B SG CYS 949 B CYS 949 1_555 O FE2 SF4 . B SF4 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc26 B SG CYS 976 B CYS 976 1_555 O FE1 SF4 . B SF4 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc27 B SG CYS 980 B CYS 980 1_555 P FE2 SF4 . B SF4 1104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc28 E NE2 HIS 118 E HIS 118 1_555 Q FE HEC . E HEC 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc29 E SD MET 165 E MET 165 1_555 Q FE HEC . E HEC 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 381 n n FE1 S3 SF4 sing 382 n n FE1 S4 SF4 sing 383 n n FE2 S1 SF4 sing 384 n n FE2 S3 SF4 sing 385 n n FE2 S4 SF4 sing 386 n n FE3 S1 SF4 sing 387 n n FE3 S2 SF4 sing 388 n n FE3 S4 SF4 sing 389 n n FE4 S1 SF4 sing 390 n n FE4 S2 SF4 sing 391 n n FE4 S3 SF4 sing 392 n n # _atom_sites.entry_id 6F0K _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 HEC A 1 301 301 HEC HEM . I 8 HEC A 1 302 302 HEC HEM . J 8 HEC A 1 303 303 HEC HEM . K 8 HEC A 1 304 304 HEC HEM . L 8 HEC A 1 305 305 HEC HEM . M 9 F3S B 1 1101 1101 F3S F3S . N 10 SF4 B 1 1102 1102 SF4 SF4 . O 10 SF4 B 1 1103 1103 SF4 SF4 . P 10 SF4 B 1 1104 1104 SF4 SF4 . Q 8 HEC E 1 400 400 HEC HEM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . O 10 169.986 141.46 152.575 1 40.77 ? FE1 SF4 1103 B 1 HETATM 2 FE FE2 SF4 . . . O 10 168.926 138.965 151.748 1 40.77 ? FE2 SF4 1103 B 1 HETATM 3 FE FE3 SF4 . . . O 10 169.263 140.874 150.041 1 40.77 ? FE3 SF4 1103 B 1 HETATM 4 FE FE4 SF4 . . . O 10 167.486 141.148 152.064 1 40.77 ? FE4 SF4 1103 B 1 HETATM 5 S S1 SF4 . . . O 10 167.344 139.65 150.376 1 40.77 ? S1 SF4 1103 B 1 HETATM 6 S S2 SF4 . . . O 10 168.851 142.784 151.231 1 40.77 ? S2 SF4 1103 B 1 HETATM 7 S S3 SF4 . . . O 10 168.62 140.127 153.646 1 40.77 ? S3 SF4 1103 B 1 HETATM 8 S S4 SF4 . . . O 10 170.904 139.908 151.244 1 40.77 ? S4 SF4 1103 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 315 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #