data_6F16
#
_model_server_result.job_id            KIBMlqnjza8vIb1W4qAH2A 
_model_server_result.datetime_utc      '2024-11-14 06:21:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6f16 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":406}' 
#
_entry.id    6F16 
#
_exptl.entry_id    6F16 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.96 
_cell.angle_gamma         90 
_cell.entry_id            6F16 
_cell.length_a            182.7 
_cell.length_b            132.78 
_cell.length_c            161.55 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6F16 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 K N N 
? 5 S N N 
? 5 V N N 
? 5 AA N N 
? 5 HA N N 
? 5 PA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ILE 71 A ILE 71 1_555 K NA NA . A NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? 
metalc ? metalc2 B O ILE 71 B ILE 71 1_555 S NA NA . B NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? 
metalc ? metalc3 C O ILE 71 C ILE 71 1_555 AA NA NA . C NA 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? 
metalc ? metalc4 D O ILE 71 D ILE 71 1_555 HA NA NA . D NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? 
metalc ? metalc5 E O ILE 71 E ILE 71 1_555 PA NA NA . E NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6F16 
_atom_sites.fract_transf_matrix[1][1]    0.005473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00126 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007531 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006352 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 ACT A 1 401 401 ACT ACT . 
G 3 PLC A 1 402 402 PLC PLC . 
H 4 CL A 1 403 405 CL CL . 
I 4 CL A 1 404 406 CL CL . 
J 4 CL A 1 405 407 CL CL . 
K 5 NA A 1 406 408 NA NA . 
L 2 ACT A 1 407 410 ACT ACT . 
M 6 LMT A 1 408 411 LMT LMT . 
N 6 LMT A 1 409 412 LMT LMT . 
O 2 ACT A 1 410 401 ACT ACT . 
P 3 PLC B 1 401 403 PLC PLC . 
Q 3 PLC B 1 402 402 PLC PLC . 
R 4 CL B 1 403 405 CL CL . 
S 5 NA B 1 404 406 NA NA . 
T 2 ACT B 1 405 407 ACT ACT . 
U 6 LMT B 1 406 408 LMT LMT . 
V 5 NA C 1 401 409 NA NA . 
W 3 PLC C 1 402 403 PLC PLC . 
X 2 ACT C 1 403 401 ACT ACT . 
Y 3 PLC C 1 404 402 PLC PLC . 
Z 4 CL C 1 405 405 CL CL . 
AA 5 NA C 1 406 406 NA NA . 
BA 2 ACT C 1 407 407 ACT ACT . 
CA 6 LMT C 1 408 408 LMT LMT . 
DA 2 ACT C 1 409 401 ACT ACT . 
EA 3 PLC D 1 401 403 PLC PLC . 
FA 3 PLC D 1 402 402 PLC PLC . 
GA 4 CL D 1 403 405 CL CL . 
HA 5 NA D 1 404 406 NA NA . 
IA 2 ACT D 1 405 407 ACT ACT . 
JA 6 LMT D 1 406 408 LMT LMT . 
KA 2 ACT D 1 407 401 ACT ACT . 
LA 3 PLC E 1 401 403 PLC PLC . 
MA 3 PLC E 1 402 402 PLC PLC . 
NA 3 PLC E 1 403 403 PLC PLC . 
OA 4 CL E 1 404 405 CL CL . 
PA 5 NA E 1 405 406 NA NA . 
QA 2 ACT E 1 406 407 ACT ACT . 
RA 6 LMT E 1 407 408 LMT LMT . 
SA 7 HOH A 1 501 210 HOH HOH . 
SA 7 HOH A 2 502 168 HOH HOH . 
SA 7 HOH A 3 503 140 HOH HOH . 
SA 7 HOH A 4 504 92 HOH HOH . 
SA 7 HOH A 5 505 145 HOH HOH . 
SA 7 HOH A 6 506 112 HOH HOH . 
SA 7 HOH A 7 507 38 HOH HOH . 
SA 7 HOH A 8 508 572 HOH HOH . 
SA 7 HOH A 9 509 203 HOH HOH . 
SA 7 HOH A 10 510 501 HOH HOH . 
SA 7 HOH A 11 511 205 HOH HOH . 
SA 7 HOH A 12 512 577 HOH HOH . 
TA 7 HOH B 1 501 16 HOH HOH . 
TA 7 HOH B 2 502 19 HOH HOH . 
TA 7 HOH B 3 503 166 HOH HOH . 
TA 7 HOH B 4 504 183 HOH HOH . 
TA 7 HOH B 5 505 26 HOH HOH . 
TA 7 HOH B 6 506 13 HOH HOH . 
TA 7 HOH B 7 507 111 HOH HOH . 
TA 7 HOH B 8 508 121 HOH HOH . 
TA 7 HOH B 9 509 146 HOH HOH . 
TA 7 HOH B 10 510 143 HOH HOH . 
TA 7 HOH B 11 511 197 HOH HOH . 
TA 7 HOH B 12 512 105 HOH HOH . 
TA 7 HOH B 13 513 28 HOH HOH . 
TA 7 HOH B 14 514 136 HOH HOH . 
TA 7 HOH B 15 515 559 HOH HOH . 
TA 7 HOH B 16 516 194 HOH HOH . 
TA 7 HOH B 17 517 206 HOH HOH . 
TA 7 HOH B 18 518 501 HOH HOH . 
TA 7 HOH B 19 519 81 HOH HOH . 
UA 7 HOH C 1 501 163 HOH HOH . 
UA 7 HOH C 2 502 132 HOH HOH . 
UA 7 HOH C 3 503 129 HOH HOH . 
UA 7 HOH C 4 504 510 HOH HOH . 
UA 7 HOH C 5 505 177 HOH HOH . 
UA 7 HOH C 6 506 118 HOH HOH . 
UA 7 HOH C 7 507 551 HOH HOH . 
UA 7 HOH C 8 508 409 HOH HOH . 
UA 7 HOH C 9 509 15 HOH HOH . 
UA 7 HOH C 10 510 35 HOH HOH . 
UA 7 HOH C 11 511 21 HOH HOH . 
UA 7 HOH C 12 512 209 HOH HOH . 
UA 7 HOH C 13 513 521 HOH HOH . 
UA 7 HOH C 14 514 549 HOH HOH . 
UA 7 HOH C 15 515 95 HOH HOH . 
UA 7 HOH C 16 516 139 HOH HOH . 
VA 7 HOH D 1 501 11 HOH HOH . 
VA 7 HOH D 2 502 59 HOH HOH . 
VA 7 HOH D 3 503 130 HOH HOH . 
VA 7 HOH D 4 504 526 HOH HOH . 
VA 7 HOH D 5 505 17 HOH HOH . 
VA 7 HOH D 6 506 131 HOH HOH . 
VA 7 HOH D 7 507 195 HOH HOH . 
VA 7 HOH D 8 508 410 HOH HOH . 
VA 7 HOH D 9 509 86 HOH HOH . 
VA 7 HOH D 10 510 154 HOH HOH . 
VA 7 HOH D 11 511 192 HOH HOH . 
VA 7 HOH D 12 512 120 HOH HOH . 
VA 7 HOH D 13 513 539 HOH HOH . 
VA 7 HOH D 14 514 207 HOH HOH . 
VA 7 HOH D 15 515 37 HOH HOH . 
VA 7 HOH D 16 516 501 HOH HOH . 
WA 7 HOH E 1 501 176 HOH HOH . 
WA 7 HOH E 2 502 29 HOH HOH . 
WA 7 HOH E 3 503 208 HOH HOH . 
WA 7 HOH E 4 504 103 HOH HOH . 
WA 7 HOH E 5 505 174 HOH HOH . 
WA 7 HOH E 6 506 31 HOH HOH . 
WA 7 HOH E 7 507 57 HOH HOH . 
WA 7 HOH E 8 508 65 HOH HOH . 
WA 7 HOH E 9 509 501 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         AA 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               26.267 
_atom_site.Cartn_y               -42.424 
_atom_site.Cartn_z               -1.983 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        61.09 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           406 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    55 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#