data_6F29 # _model_server_result.job_id CqwgS6OFgQE2IdYw51IcCw _model_server_result.datetime_utc '2025-01-11 17:02:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f29 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6F29 # _exptl.entry_id 6F29 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 257.266 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S})-2-azanyl-3-[2,4-bis(oxidanylidene)-5,7-dihydrothieno[3,4-d]pyrimidin-1-yl]propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6F29 _cell.length_a 68.04 _cell.length_b 68.04 _cell.length_c 126.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F29 _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 203 A CYS 203 1_555 A SG CYS 257 A CYS 257 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc1 A O ASN 5 A ASN 5 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.286 ? metalc ? metalc2 A O ASN 5 A ASN 5 1_555 D K K . A K 303 7_464 ? ? ? ? ? ? ? ? ? ? ? ? 3.286 ? metalc ? metalc3 A O SER 24 A SER 24 1_555 C K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc4 A O ARG 26 A ARG 26 1_555 C K K . A K 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc5 A OG SER 52 A SER 52 1_555 D K K . A K 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc6 A OG SER 52 A SER 52 1_555 D K K . A K 303 7_464 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc7 C K K . A K 302 1_555 H O HOH . A HOH 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.112 ? metalc ? metalc8 D K K . A K 303 1_555 H O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.925 ? metalc ? metalc9 D K K . A K 303 1_555 H O HOH . A HOH 406 7_464 ? ? ? ? ? ? ? ? ? ? ? ? 2.926 ? # _chem_comp.formula 'C9 H11 N3 O4 S' _chem_comp.formula_weight 257.266 _chem_comp.id CGW _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S})-2-azanyl-3-[2,4-bis(oxidanylidene)-5,7-dihydrothieno[3,4-d]pyrimidin-1-yl]propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAF CAL CGW sing 70 n n CAF SAJ CGW sing 71 n n CAG CAM CGW sing 72 n n CAG SAJ CGW sing 73 n n CAL CAM CGW doub 74 n n CAL CAN CGW sing 75 n n OAC CAN CGW doub 76 n n CAM NAQ CGW sing 77 n n CAN NAI CGW sing 78 n n NAQ CB CGW sing 79 n n NAQ CAO CGW sing 80 n n NAI CAO CGW sing 81 n n CB CA CGW sing 82 n n CAO OAD CGW doub 83 n n OXT C CGW doub 84 n n CA C CGW sing 85 n n CA N CGW sing 86 n n C O CGW sing 87 n n N H1 CGW sing 88 n n N H2 CGW sing 89 n n CA H4 CGW sing 90 n n O H5 CGW sing 91 n n CB H6 CGW sing 92 n n CB H7 CGW sing 93 n n CAF H8 CGW sing 94 n n CAF H9 CGW sing 95 n n CAG H10 CGW sing 96 n n CAG H11 CGW sing 97 n n NAI H12 CGW sing 98 n n # _atom_sites.entry_id 6F29 _atom_sites.fract_transf_matrix[1][1] 0.014697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007883 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CGW A 1 301 1 CGW DRG . C 3 K A 1 302 1 K K . D 3 K A 1 303 2 K K . E 4 CL A 1 304 1 CL CL . F 4 CL A 1 305 4 CL CL . G 4 CL A 1 306 5 CL CL . H 5 HOH A 1 401 120 HOH HOH . H 5 HOH A 2 402 121 HOH HOH . H 5 HOH A 3 403 62 HOH HOH . H 5 HOH A 4 404 35 HOH HOH . H 5 HOH A 5 405 15 HOH HOH . H 5 HOH A 6 406 6 HOH HOH . H 5 HOH A 7 407 3 HOH HOH . H 5 HOH A 8 408 21 HOH HOH . H 5 HOH A 9 409 24 HOH HOH . H 5 HOH A 10 410 13 HOH HOH . H 5 HOH A 11 411 97 HOH HOH . H 5 HOH A 12 412 66 HOH HOH . H 5 HOH A 13 413 27 HOH HOH . H 5 HOH A 14 414 10 HOH HOH . H 5 HOH A 15 415 91 HOH HOH . H 5 HOH A 16 416 12 HOH HOH . H 5 HOH A 17 417 36 HOH HOH . H 5 HOH A 18 418 32 HOH HOH . H 5 HOH A 19 419 60 HOH HOH . H 5 HOH A 20 420 40 HOH HOH . H 5 HOH A 21 421 8 HOH HOH . H 5 HOH A 22 422 67 HOH HOH . H 5 HOH A 23 423 112 HOH HOH . H 5 HOH A 24 424 106 HOH HOH . H 5 HOH A 25 425 46 HOH HOH . H 5 HOH A 26 426 4 HOH HOH . H 5 HOH A 27 427 17 HOH HOH . H 5 HOH A 28 428 45 HOH HOH . H 5 HOH A 29 429 93 HOH HOH . H 5 HOH A 30 430 56 HOH HOH . H 5 HOH A 31 431 70 HOH HOH . H 5 HOH A 32 432 109 HOH HOH . H 5 HOH A 33 433 103 HOH HOH . H 5 HOH A 34 434 7 HOH HOH . H 5 HOH A 35 435 87 HOH HOH . H 5 HOH A 36 436 107 HOH HOH . H 5 HOH A 37 437 47 HOH HOH . H 5 HOH A 38 438 64 HOH HOH . H 5 HOH A 39 439 19 HOH HOH . H 5 HOH A 40 440 26 HOH HOH . H 5 HOH A 41 441 119 HOH HOH . H 5 HOH A 42 442 95 HOH HOH . H 5 HOH A 43 443 98 HOH HOH . H 5 HOH A 44 444 118 HOH HOH . H 5 HOH A 45 445 102 HOH HOH . H 5 HOH A 46 446 108 HOH HOH . H 5 HOH A 47 447 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CGW . . . B 2 -4.333 30.251 -12.807 0.84 27.58 ? N CGW 301 A 1 HETATM 2 C CA CGW . . . B 2 -3.153 29.79 -13.533 0.84 30.03 ? CA CGW 301 A 1 HETATM 3 C C CGW . . . B 2 -2.117 30.868 -13.368 0.84 31.14 ? C CGW 301 A 1 HETATM 4 O O CGW . . . B 2 -2.543 31.927 -12.849 0.84 32.98 ? O CGW 301 A 1 HETATM 5 C CB CGW . . . B 2 -3.406 29.539 -15.028 0.84 32.76 ? CB CGW 301 A 1 HETATM 6 O OXT CGW . . . B 2 -0.964 30.603 -13.754 0.84 30.08 ? OXT CGW 301 A 1 HETATM 7 C CAF CGW . . . B 2 -7.869 27.847 -15.81 0.84 43.11 ? CAF CGW 301 A 1 HETATM 8 C CAG CGW . . . B 2 -6.299 29.857 -15.618 0.84 43.5 ? CAG CGW 301 A 1 HETATM 9 C CAL CGW . . . B 2 -6.536 27.532 -15.527 0.84 41.84 ? CAL CGW 301 A 1 HETATM 10 C CAM CGW . . . B 2 -5.67 28.603 -15.421 0.84 41.87 ? CAM CGW 301 A 1 HETATM 11 C CAN CGW . . . B 2 -6.054 26.288 -15.371 0.84 39.22 ? CAN CGW 301 A 1 HETATM 12 C CAO CGW . . . B 2 -3.841 27.147 -14.99 0.84 36.47 ? CAO CGW 301 A 1 HETATM 13 N NAI CGW . . . B 2 -4.692 26.045 -15.09 0.84 37.6 ? NAI CGW 301 A 1 HETATM 14 N NAQ CGW . . . B 2 -4.341 28.395 -15.162 0.84 36.84 ? NAQ CGW 301 A 1 HETATM 15 O OAC CGW . . . B 2 -6.799 25.308 -15.451 0.84 37.8 ? OAC CGW 301 A 1 HETATM 16 O OAD CGW . . . B 2 -2.653 26.951 -14.755 0.84 36.59 ? OAD CGW 301 A 1 HETATM 17 S SAJ CGW . . . B 2 -8.073 29.586 -15.395 0.84 46.54 ? SAJ CGW 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 17 #