data_6F2I
#
_model_server_result.job_id            P8bzTzAMTFmX-3uWOXCLQw 
_model_server_result.datetime_utc      '2024-11-05 06:56:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6f2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":208}' 
#
_entry.id    6F2I 
#
_exptl.entry_id    6F2I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6F2I 
_cell.length_a            78.149 
_cell.length_b            78.149 
_cell.length_c            37.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6F2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc1 A O SER 60 A SER 60 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc2 A O CYS 64 A CYS 64 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc3 A OG SER 72 A SER 72 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
metalc ? metalc4 A O ARG 73 A ARG 73 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? 
metalc ? metalc5 A OD1 ASP 101 A ASP 101 1_555 C TB 7MT . A 7MT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? 
metalc ? metalc6 A OD2 ASP 101 A ASP 101 1_555 C TB 7MT . A 7MT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
metalc ? metalc7 B TB TB . A TB 201 1_555 D N09 7MT . A 7MT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc8 B TB TB . A TB 201 1_555 D N23 7MT . A 7MT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.156 ? 
metalc ? metalc9 B TB TB . A TB 201 1_555 K O HOH . A HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.484 ? 
metalc ? metalc10 B TB TB . A TB 201 1_555 K O HOH . A HOH 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.357 ? 
metalc ? metalc11 C O25 7MT . A 7MT 202 1_555 D TB 7MT . A 7MT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc12 I NA NA . A NA 208 1_555 K O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc13 I NA NA . A NA 208 1_555 K O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6F2I 
_atom_sites.fract_transf_matrix[1][1]    0.012796 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012796 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TB A 1 201 3 TB TB . 
C 3 7MT A 1 202 1 7MT TAC . 
D 3 7MT A 1 203 2 7MT TAC . 
E 4 CL A 1 204 1 CL CL . 
F 4 CL A 1 205 2 CL CL . 
G 4 CL A 1 206 3 CL CL . 
H 4 CL A 1 207 4 CL CL . 
I 5 NA A 1 208 1 NA NA . 
J 6 ACT A 1 209 1 ACT LIG . 
K 7 HOH A 1 301 36 HOH HOH . 
K 7 HOH A 2 302 100 HOH HOH . 
K 7 HOH A 3 303 49 HOH HOH . 
K 7 HOH A 4 304 124 HOH HOH . 
K 7 HOH A 5 305 30 HOH HOH . 
K 7 HOH A 6 306 95 HOH HOH . 
K 7 HOH A 7 307 7 HOH HOH . 
K 7 HOH A 8 308 3 HOH HOH . 
K 7 HOH A 9 309 83 HOH HOH . 
K 7 HOH A 10 310 22 HOH HOH . 
K 7 HOH A 11 311 2 HOH HOH . 
K 7 HOH A 12 312 50 HOH HOH . 
K 7 HOH A 13 313 101 HOH HOH . 
K 7 HOH A 14 314 29 HOH HOH . 
K 7 HOH A 15 315 111 HOH HOH . 
K 7 HOH A 16 316 135 HOH HOH . 
K 7 HOH A 17 317 56 HOH HOH . 
K 7 HOH A 18 318 123 HOH HOH . 
K 7 HOH A 19 319 114 HOH HOH . 
K 7 HOH A 20 320 1 HOH HOH . 
K 7 HOH A 21 321 103 HOH HOH . 
K 7 HOH A 22 322 45 HOH HOH . 
K 7 HOH A 23 323 144 HOH HOH . 
K 7 HOH A 24 324 154 HOH HOH . 
K 7 HOH A 25 325 132 HOH HOH . 
K 7 HOH A 26 326 60 HOH HOH . 
K 7 HOH A 27 327 178 HOH HOH . 
K 7 HOH A 28 328 98 HOH HOH . 
K 7 HOH A 29 329 84 HOH HOH . 
K 7 HOH A 30 330 172 HOH HOH . 
K 7 HOH A 31 331 105 HOH HOH . 
K 7 HOH A 32 332 193 HOH HOH . 
K 7 HOH A 33 333 11 HOH HOH . 
K 7 HOH A 34 334 167 HOH HOH . 
K 7 HOH A 35 335 69 HOH HOH . 
K 7 HOH A 36 336 66 HOH HOH . 
K 7 HOH A 37 337 138 HOH HOH . 
K 7 HOH A 38 338 75 HOH HOH . 
K 7 HOH A 39 339 183 HOH HOH . 
K 7 HOH A 40 340 74 HOH HOH . 
K 7 HOH A 41 341 48 HOH HOH . 
K 7 HOH A 42 342 27 HOH HOH . 
K 7 HOH A 43 343 4 HOH HOH . 
K 7 HOH A 44 344 145 HOH HOH . 
K 7 HOH A 45 345 107 HOH HOH . 
K 7 HOH A 46 346 24 HOH HOH . 
K 7 HOH A 47 347 16 HOH HOH . 
K 7 HOH A 48 348 136 HOH HOH . 
K 7 HOH A 49 349 21 HOH HOH . 
K 7 HOH A 50 350 35 HOH HOH . 
K 7 HOH A 51 351 26 HOH HOH . 
K 7 HOH A 52 352 37 HOH HOH . 
K 7 HOH A 53 353 133 HOH HOH . 
K 7 HOH A 54 354 52 HOH HOH . 
K 7 HOH A 55 355 33 HOH HOH . 
K 7 HOH A 56 356 25 HOH HOH . 
K 7 HOH A 57 357 38 HOH HOH . 
K 7 HOH A 58 358 121 HOH HOH . 
K 7 HOH A 59 359 115 HOH HOH . 
K 7 HOH A 60 360 14 HOH HOH . 
K 7 HOH A 61 361 57 HOH HOH . 
K 7 HOH A 62 362 134 HOH HOH . 
K 7 HOH A 63 363 64 HOH HOH . 
K 7 HOH A 64 364 80 HOH HOH . 
K 7 HOH A 65 365 87 HOH HOH . 
K 7 HOH A 66 366 5 HOH HOH . 
K 7 HOH A 67 367 153 HOH HOH . 
K 7 HOH A 68 368 97 HOH HOH . 
K 7 HOH A 69 369 108 HOH HOH . 
K 7 HOH A 70 370 40 HOH HOH . 
K 7 HOH A 71 371 63 HOH HOH . 
K 7 HOH A 72 372 72 HOH HOH . 
K 7 HOH A 73 373 82 HOH HOH . 
K 7 HOH A 74 374 58 HOH HOH . 
K 7 HOH A 75 375 85 HOH HOH . 
K 7 HOH A 76 376 19 HOH HOH . 
K 7 HOH A 77 377 125 HOH HOH . 
K 7 HOH A 78 378 6 HOH HOH . 
K 7 HOH A 79 379 73 HOH HOH . 
K 7 HOH A 80 380 44 HOH HOH . 
K 7 HOH A 81 381 39 HOH HOH . 
K 7 HOH A 82 382 31 HOH HOH . 
K 7 HOH A 83 383 109 HOH HOH . 
K 7 HOH A 84 384 20 HOH HOH . 
K 7 HOH A 85 385 156 HOH HOH . 
K 7 HOH A 86 386 61 HOH HOH . 
K 7 HOH A 87 387 51 HOH HOH . 
K 7 HOH A 88 388 65 HOH HOH . 
K 7 HOH A 89 389 127 HOH HOH . 
K 7 HOH A 90 390 170 HOH HOH . 
K 7 HOH A 91 391 116 HOH HOH . 
K 7 HOH A 92 392 9 HOH HOH . 
K 7 HOH A 93 393 59 HOH HOH . 
K 7 HOH A 94 394 187 HOH HOH . 
K 7 HOH A 95 395 28 HOH HOH . 
K 7 HOH A 96 396 76 HOH HOH . 
K 7 HOH A 97 397 131 HOH HOH . 
K 7 HOH A 98 398 8 HOH HOH . 
K 7 HOH A 99 399 106 HOH HOH . 
K 7 HOH A 100 400 47 HOH HOH . 
K 7 HOH A 101 401 41 HOH HOH . 
K 7 HOH A 102 402 104 HOH HOH . 
K 7 HOH A 103 403 151 HOH HOH . 
K 7 HOH A 104 404 13 HOH HOH . 
K 7 HOH A 105 405 130 HOH HOH . 
K 7 HOH A 106 406 23 HOH HOH . 
K 7 HOH A 107 407 146 HOH HOH . 
K 7 HOH A 108 408 159 HOH HOH . 
K 7 HOH A 109 409 143 HOH HOH . 
K 7 HOH A 110 410 91 HOH HOH . 
K 7 HOH A 111 411 189 HOH HOH . 
K 7 HOH A 112 412 93 HOH HOH . 
K 7 HOH A 113 413 102 HOH HOH . 
K 7 HOH A 114 414 142 HOH HOH . 
K 7 HOH A 115 415 12 HOH HOH . 
K 7 HOH A 116 416 46 HOH HOH . 
K 7 HOH A 117 417 71 HOH HOH . 
K 7 HOH A 118 418 113 HOH HOH . 
K 7 HOH A 119 419 67 HOH HOH . 
K 7 HOH A 120 420 88 HOH HOH . 
K 7 HOH A 121 421 77 HOH HOH . 
K 7 HOH A 122 422 168 HOH HOH . 
K 7 HOH A 123 423 43 HOH HOH . 
K 7 HOH A 124 424 94 HOH HOH . 
K 7 HOH A 125 425 118 HOH HOH . 
K 7 HOH A 126 426 86 HOH HOH . 
K 7 HOH A 127 427 99 HOH HOH . 
K 7 HOH A 128 428 17 HOH HOH . 
K 7 HOH A 129 429 10 HOH HOH . 
K 7 HOH A 130 430 15 HOH HOH . 
K 7 HOH A 131 431 42 HOH HOH . 
K 7 HOH A 132 432 112 HOH HOH . 
K 7 HOH A 133 433 68 HOH HOH . 
K 7 HOH A 134 434 34 HOH HOH . 
K 7 HOH A 135 435 90 HOH HOH . 
K 7 HOH A 136 436 140 HOH HOH . 
K 7 HOH A 137 437 175 HOH HOH . 
K 7 HOH A 138 438 152 HOH HOH . 
K 7 HOH A 139 439 165 HOH HOH . 
K 7 HOH A 140 440 194 HOH HOH . 
K 7 HOH A 141 441 54 HOH HOH . 
K 7 HOH A 142 442 129 HOH HOH . 
K 7 HOH A 143 443 186 HOH HOH . 
K 7 HOH A 144 444 177 HOH HOH . 
K 7 HOH A 145 445 128 HOH HOH . 
K 7 HOH A 146 446 119 HOH HOH . 
K 7 HOH A 147 447 173 HOH HOH . 
K 7 HOH A 148 448 171 HOH HOH . 
K 7 HOH A 149 449 179 HOH HOH . 
K 7 HOH A 150 450 190 HOH HOH . 
K 7 HOH A 151 451 164 HOH HOH . 
K 7 HOH A 152 452 149 HOH HOH . 
K 7 HOH A 153 453 184 HOH HOH . 
K 7 HOH A 154 454 32 HOH HOH . 
K 7 HOH A 155 455 137 HOH HOH . 
K 7 HOH A 156 456 62 HOH HOH . 
K 7 HOH A 157 457 192 HOH HOH . 
K 7 HOH A 158 458 55 HOH HOH . 
K 7 HOH A 159 459 89 HOH HOH . 
K 7 HOH A 160 460 181 HOH HOH . 
K 7 HOH A 161 461 162 HOH HOH . 
K 7 HOH A 162 462 139 HOH HOH . 
K 7 HOH A 163 463 176 HOH HOH . 
K 7 HOH A 164 464 169 HOH HOH . 
K 7 HOH A 165 465 126 HOH HOH . 
K 7 HOH A 166 466 53 HOH HOH . 
K 7 HOH A 167 467 122 HOH HOH . 
K 7 HOH A 168 468 195 HOH HOH . 
K 7 HOH A 169 469 174 HOH HOH . 
K 7 HOH A 170 470 92 HOH HOH . 
K 7 HOH A 171 471 18 HOH HOH . 
K 7 HOH A 172 472 117 HOH HOH . 
K 7 HOH A 173 473 160 HOH HOH . 
K 7 HOH A 174 474 188 HOH HOH . 
K 7 HOH A 175 475 79 HOH HOH . 
K 7 HOH A 176 476 157 HOH HOH . 
K 7 HOH A 177 477 180 HOH HOH . 
K 7 HOH A 178 478 70 HOH HOH . 
K 7 HOH A 179 479 161 HOH HOH . 
K 7 HOH A 180 480 141 HOH HOH . 
K 7 HOH A 181 481 158 HOH HOH . 
K 7 HOH A 182 482 120 HOH HOH . 
K 7 HOH A 183 483 163 HOH HOH . 
K 7 HOH A 184 484 96 HOH HOH . 
K 7 HOH A 185 485 81 HOH HOH . 
K 7 HOH A 186 486 150 HOH HOH . 
K 7 HOH A 187 487 110 HOH HOH . 
K 7 HOH A 188 488 78 HOH HOH . 
K 7 HOH A 189 489 155 HOH HOH . 
K 7 HOH A 190 490 182 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               7.717 
_atom_site.Cartn_y               14.292 
_atom_site.Cartn_z               31.623 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        13.43 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           208 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#