data_6F3E # _model_server_result.job_id vZyH_BhTk9yHUKd8JShxdw _model_server_result.datetime_utc '2024-12-27 10:38:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 6F3E # _exptl.entry_id 6F3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 416.537 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(3~{R})-12-(4-morpholin-4-ylcyclohexyl)oxy-7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(8),2(6),9,11-tetraen-3-yl]ethanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6F3E _cell.length_a 87.181 _cell.length_b 109.371 _cell.length_c 141.544 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TPO 179 A TPO 342 1_555 A N VAL 180 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale2 A C MET 181 A MET 344 1_555 A N TPO 182 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale3 A C TPO 182 A TPO 345 1_555 A N SER 183 A SER 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale4 B C TPO 179 B TPO 342 1_555 B N VAL 180 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale5 B C MET 181 B MET 344 1_555 B N TPO 182 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale6 B C TPO 182 B TPO 345 1_555 B N SER 183 B SER 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? # _chem_comp.formula 'C21 H28 N4 O3 S' _chem_comp.formula_weight 416.537 _chem_comp.id CJQ _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(3~{R})-12-(4-morpholin-4-ylcyclohexyl)oxy-7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(8),2(6),9,11-tetraen-3-yl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C CJQ doub 70 n y N1 C5 CJQ sing 71 n y C N CJQ sing 72 n y S C5 CJQ sing 73 n y S C4 CJQ sing 74 n y C5 C2 CJQ doub 75 n y N C1 CJQ doub 76 n y C2 C1 CJQ sing 77 n y C2 C3 CJQ sing 78 n y C1 O1 CJQ sing 79 n n C4 C3 CJQ doub 80 n y C4 C6 CJQ sing 81 n n C3 C8 CJQ sing 82 n n C6 C7 CJQ sing 83 n n O1 C11 CJQ sing 84 n n C11 C16 CJQ sing 85 n n C11 C12 CJQ sing 86 n n C16 C15 CJQ sing 87 n n C15 C14 CJQ sing 88 n n C8 C7 CJQ sing 89 n n C8 C9 CJQ sing 90 n n C17 C18 CJQ sing 91 n n C17 N3 CJQ sing 92 n n C12 C13 CJQ sing 93 n n C9 C10 CJQ sing 94 n n C18 O2 CJQ sing 95 n n C13 C14 CJQ sing 96 n n C14 N3 CJQ sing 97 n n N3 C20 CJQ sing 98 n n O2 C19 CJQ sing 99 n n C10 N2 CJQ sing 100 n n C10 O CJQ doub 101 n n C20 C19 CJQ sing 102 n n C7 H1 CJQ sing 103 n n C7 H2 CJQ sing 104 n n C8 H3 CJQ sing 105 n n C9 H4 CJQ sing 106 n n C9 H5 CJQ sing 107 n n C11 H6 CJQ sing 108 n n C12 H7 CJQ sing 109 n n C12 H8 CJQ sing 110 n n C13 H9 CJQ sing 111 n n C13 H10 CJQ sing 112 n n C14 H11 CJQ sing 113 n n C15 H12 CJQ sing 114 n n C15 H13 CJQ sing 115 n n C16 H14 CJQ sing 116 n n C16 H15 CJQ sing 117 n n C19 H16 CJQ sing 118 n n C19 H17 CJQ sing 119 n n C20 H18 CJQ sing 120 n n C20 H19 CJQ sing 121 n n N2 H20 CJQ sing 122 n n N2 H21 CJQ sing 123 n n C6 H22 CJQ sing 124 n n C6 H23 CJQ sing 125 n n C H24 CJQ sing 126 n n C18 H26 CJQ sing 127 n n C18 H27 CJQ sing 128 n n C17 H28 CJQ sing 129 n n C17 H29 CJQ sing 130 n n # _atom_sites.entry_id 6F3E _atom_sites.fract_transf_matrix[1][1] 0.01147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007065 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 501 1 SO4 SO4 . D 3 CJQ A 1 502 1 CJQ INH . E 3 CJQ B 1 501 2 CJQ INH . F 4 HOH A 1 601 4 HOH HOH . F 4 HOH A 2 602 2 HOH HOH . F 4 HOH A 3 603 3 HOH HOH . F 4 HOH A 4 604 5 HOH HOH . F 4 HOH A 5 605 6 HOH HOH . G 4 HOH B 1 601 9 HOH HOH . G 4 HOH B 2 602 1 HOH HOH . G 4 HOH B 3 603 7 HOH HOH . G 4 HOH B 4 604 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CJQ . . . E 3 -53.106 -37.917 9.316 1 47.15 ? C1 CJQ 501 B 1 HETATM 2 C C2 CJQ . . . E 3 -54.497 -37.864 9.081 1 45.67 ? C2 CJQ 501 B 1 HETATM 3 C C3 CJQ . . . E 3 -55.632 -37.89 9.94 1 46.26 ? C3 CJQ 501 B 1 HETATM 4 C C7 CJQ . . . E 3 -57.436 -38.668 11.248 1 46.97 ? C7 CJQ 501 B 1 HETATM 5 C C8 CJQ . . . E 3 -55.988 -38.118 11.392 1 46.99 ? C8 CJQ 501 B 1 HETATM 6 C C9 CJQ . . . E 3 -55.842 -36.85 12.24 1 47.07 ? C9 CJQ 501 B 1 HETATM 7 C C10 CJQ . . . E 3 -55.609 -37.146 13.704 1 50.95 ? C10 CJQ 501 B 1 HETATM 8 C C11 CJQ . . . E 3 -51.357 -38.141 10.935 1 47.51 ? C11 CJQ 501 B 1 HETATM 9 C C12 CJQ . . . E 3 -50.735 -36.79 11.204 1 47.3 ? C12 CJQ 501 B 1 HETATM 10 C C13 CJQ . . . E 3 -49.333 -36.957 11.787 1 47.82 ? C13 CJQ 501 B 1 HETATM 11 C C14 CJQ . . . E 3 -49.389 -37.843 13.029 1 50.16 ? C14 CJQ 501 B 1 HETATM 12 C C15 CJQ . . . E 3 -50.042 -39.188 12.75 1 50.17 ? C15 CJQ 501 B 1 HETATM 13 C C16 CJQ . . . E 3 -51.435 -38.97 12.193 1 47.87 ? C16 CJQ 501 B 1 HETATM 14 C C19 CJQ . . . E 3 -45.7 -38.567 13.752 1 55.81 ? C19 CJQ 501 B 1 HETATM 15 C C20 CJQ . . . E 3 -46.826 -38.032 12.889 1 53.46 ? C20 CJQ 501 B 1 HETATM 16 O O CJQ . . . E 3 -56.114 -38.138 14.24 1 49.25 ? O CJQ 501 B 1 HETATM 17 N N2 CJQ . . . E 3 -54.806 -36.314 14.345 1 56.88 ? N2 CJQ 501 B 1 HETATM 18 C C6 CJQ . . . E 3 -58.007 -37.967 10.027 1 46.86 ? C6 CJQ 501 B 1 HETATM 19 C C4 CJQ . . . E 3 -56.777 -37.675 9.251 1 47.26 ? C4 CJQ 501 B 1 HETATM 20 C C5 CJQ . . . E 3 -54.835 -37.671 7.744 1 43.68 ? C5 CJQ 501 B 1 HETATM 21 S S CJQ . . . E 3 -56.557 -37.506 7.533 1 46.87 ? S CJQ 501 B 1 HETATM 22 N N1 CJQ . . . E 3 -53.967 -37.559 6.737 1 43.91 ? N1 CJQ 501 B 1 HETATM 23 C C CJQ . . . E 3 -52.688 -37.614 7.123 1 44.99 ? C CJQ 501 B 1 HETATM 24 N N CJQ . . . E 3 -52.201 -37.786 8.358 1 48.17 ? N CJQ 501 B 1 HETATM 25 O O1 CJQ . . . E 3 -52.753 -38.057 10.602 1 46.64 ? O1 CJQ 501 B 1 HETATM 26 N N3 CJQ . . . E 3 -48.073 -38.033 13.672 1 54.84 ? N3 CJQ 501 B 1 HETATM 27 O O2 CJQ . . . E 3 -45.574 -37.854 15.002 1 54.23 ? O2 CJQ 501 B 1 HETATM 28 C C18 CJQ . . . E 3 -46.797 -37.87 15.731 1 52.39 ? C18 CJQ 501 B 1 HETATM 29 C C17 CJQ . . . E 3 -47.921 -37.275 14.923 1 55.57 ? C17 CJQ 501 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #