data_6F3E
#
_model_server_result.job_id            z4MK5ylLui5YK4k0hxPJ2w 
_model_server_result.datetime_utc      '2024-12-27 09:53:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6f3e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    6F3E 
#
_exptl.entry_id    6F3E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              416.537 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[(3~{R})-12-(4-morpholin-4-ylcyclohexyl)oxy-7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(8),2(6),9,11-tetraen-3-yl]ethanamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6F3E 
_cell.length_a            87.181 
_cell.length_b            109.371 
_cell.length_c            141.544 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6F3E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TPO 179 A TPO 342 1_555 A N VAL 180 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
covale ? covale2 A C MET 181 A MET 344 1_555 A N TPO 182 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale3 A C TPO 182 A TPO 345 1_555 A N SER 183 A SER 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale4 B C TPO 179 B TPO 342 1_555 B N VAL 180 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale5 B C MET 181 B MET 344 1_555 B N TPO 182 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale6 B C TPO 182 B TPO 345 1_555 B N SER 183 B SER 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
#
_chem_comp.formula           'C21 H28 N4 O3 S' 
_chem_comp.formula_weight    416.537 
_chem_comp.id                CJQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[(3~{R})-12-(4-morpholin-4-ylcyclohexyl)oxy-7-thia-9,11-diazatricyclo[6.4.0.0^{2,6}]dodeca-1(8),2(6),9,11-tetraen-3-yl]ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C CJQ doub 70 n y 
N1 C5 CJQ sing 71 n y 
C N CJQ sing 72 n y 
S C5 CJQ sing 73 n y 
S C4 CJQ sing 74 n y 
C5 C2 CJQ doub 75 n y 
N C1 CJQ doub 76 n y 
C2 C1 CJQ sing 77 n y 
C2 C3 CJQ sing 78 n y 
C1 O1 CJQ sing 79 n n 
C4 C3 CJQ doub 80 n y 
C4 C6 CJQ sing 81 n n 
C3 C8 CJQ sing 82 n n 
C6 C7 CJQ sing 83 n n 
O1 C11 CJQ sing 84 n n 
C11 C16 CJQ sing 85 n n 
C11 C12 CJQ sing 86 n n 
C16 C15 CJQ sing 87 n n 
C15 C14 CJQ sing 88 n n 
C8 C7 CJQ sing 89 n n 
C8 C9 CJQ sing 90 n n 
C17 C18 CJQ sing 91 n n 
C17 N3 CJQ sing 92 n n 
C12 C13 CJQ sing 93 n n 
C9 C10 CJQ sing 94 n n 
C18 O2 CJQ sing 95 n n 
C13 C14 CJQ sing 96 n n 
C14 N3 CJQ sing 97 n n 
N3 C20 CJQ sing 98 n n 
O2 C19 CJQ sing 99 n n 
C10 N2 CJQ sing 100 n n 
C10 O CJQ doub 101 n n 
C20 C19 CJQ sing 102 n n 
C7 H1 CJQ sing 103 n n 
C7 H2 CJQ sing 104 n n 
C8 H3 CJQ sing 105 n n 
C9 H4 CJQ sing 106 n n 
C9 H5 CJQ sing 107 n n 
C11 H6 CJQ sing 108 n n 
C12 H7 CJQ sing 109 n n 
C12 H8 CJQ sing 110 n n 
C13 H9 CJQ sing 111 n n 
C13 H10 CJQ sing 112 n n 
C14 H11 CJQ sing 113 n n 
C15 H12 CJQ sing 114 n n 
C15 H13 CJQ sing 115 n n 
C16 H14 CJQ sing 116 n n 
C16 H15 CJQ sing 117 n n 
C19 H16 CJQ sing 118 n n 
C19 H17 CJQ sing 119 n n 
C20 H18 CJQ sing 120 n n 
C20 H19 CJQ sing 121 n n 
N2 H20 CJQ sing 122 n n 
N2 H21 CJQ sing 123 n n 
C6 H22 CJQ sing 124 n n 
C6 H23 CJQ sing 125 n n 
C H24 CJQ sing 126 n n 
C18 H26 CJQ sing 127 n n 
C18 H27 CJQ sing 128 n n 
C17 H28 CJQ sing 129 n n 
C17 H29 CJQ sing 130 n n 
#
_atom_sites.entry_id                     6F3E 
_atom_sites.fract_transf_matrix[1][1]    0.01147 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009143 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007065 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 501 1 SO4 SO4 . 
D 3 CJQ A 1 502 1 CJQ INH . 
E 3 CJQ B 1 501 2 CJQ INH . 
F 4 HOH A 1 601 4 HOH HOH . 
F 4 HOH A 2 602 2 HOH HOH . 
F 4 HOH A 3 603 3 HOH HOH . 
F 4 HOH A 4 604 5 HOH HOH . 
F 4 HOH A 5 605 6 HOH HOH . 
G 4 HOH B 1 601 9 HOH HOH . 
G 4 HOH B 2 602 1 HOH HOH . 
G 4 HOH B 3 603 7 HOH HOH . 
G 4 HOH B 4 604 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CJQ . . . D 3 -18.906 -15.964 10.199 1 54.55 ? C1 CJQ 502 A 1 
HETATM 2 C C2 CJQ . . . D 3 -17.502 -16.118 10.053 1 53.31 ? C2 CJQ 502 A 1 
HETATM 3 C C3 CJQ . . . D 3 -16.41 -16.042 10.97 1 57.04 ? C3 CJQ 502 A 1 
HETATM 4 C C7 CJQ . . . D 3 -14.597 -15.8 12.511 1 66.01 ? C7 CJQ 502 A 1 
HETATM 5 C C8 CJQ . . . D 3 -16.162 -15.784 12.439 1 63.17 ? C8 CJQ 502 A 1 
HETATM 6 C C9 CJQ . . . D 3 -16.914 -16.87 13.212 1 64.66 ? C9 CJQ 502 A 1 
HETATM 7 C C10 CJQ . . . D 3 -16.675 -16.814 14.703 1 63.31 ? C10 CJQ 502 A 1 
HETATM 8 C C11 CJQ . . . D 3 -20.774 -15.712 11.729 1 58.1 ? C11 CJQ 502 A 1 
HETATM 9 C C12 CJQ . . . D 3 -20.807 -15.02 13.067 1 59.58 ? C12 CJQ 502 A 1 
HETATM 10 C C13 CJQ . . . D 3 -22.244 -14.761 13.483 1 60.74 ? C13 CJQ 502 A 1 
HETATM 11 C C14 CJQ . . . D 3 -23.083 -16.035 13.516 1 61.95 ? C14 CJQ 502 A 1 
HETATM 12 C C15 CJQ . . . D 3 -22.946 -16.881 12.238 1 59.64 ? C15 CJQ 502 A 1 
HETATM 13 C C16 CJQ . . . D 3 -21.48 -17.051 11.801 1 59.99 ? C16 CJQ 502 A 1 
HETATM 14 C C19 CJQ . . . D 3 -26.189 -15.459 15.616 1 66.34 ? C19 CJQ 502 A 1 
HETATM 15 C C20 CJQ . . . D 3 -24.932 -16.21 15.246 1 64.59 ? C20 CJQ 502 A 1 
HETATM 16 O O CJQ . . . D 3 -17.159 -15.908 15.381 1 63.3 ? O CJQ 502 A 1 
HETATM 17 N N2 CJQ . . . D 3 -15.934 -17.785 15.21 1 62.43 ? N2 CJQ 502 A 1 
HETATM 18 C C6 CJQ . . . D 3 -14.095 -16.53 11.281 1 64.39 ? C6 CJQ 502 A 1 
HETATM 19 C C4 CJQ . . . D 3 -15.247 -16.391 10.369 1 61.16 ? C4 CJQ 502 A 1 
HETATM 20 C C5 CJQ . . . D 3 -17.104 -16.495 8.773 1 51.98 ? C5 CJQ 502 A 1 
HETATM 21 S S CJQ . . . D 3 -15.397 -16.82 8.691 1 62.25 ? S CJQ 502 A 1 
HETATM 22 N N1 CJQ . . . D 3 -17.91 -16.639 7.725 1 50.16 ? N1 CJQ 502 A 1 
HETATM 23 C C CJQ . . . D 3 -19.201 -16.414 8.008 1 53.22 ? C CJQ 502 A 1 
HETATM 24 N N CJQ . . . D 3 -19.752 -16.086 9.185 1 55.24 ? N CJQ 502 A 1 
HETATM 25 O O1 CJQ . . . D 3 -19.351 -15.888 11.473 1 54.89 ? O1 CJQ 502 A 1 
HETATM 26 N N3 CJQ . . . D 3 -24.461 -15.735 13.943 1 64.88 ? N3 CJQ 502 A 1 
HETATM 27 O O2 CJQ . . . D 3 -27.21 -15.597 14.612 1 67.82 ? O2 CJQ 502 A 1 
HETATM 28 C C18 CJQ . . . D 3 -26.745 -15.148 13.325 1 67.06 ? C18 CJQ 502 A 1 
HETATM 29 C C17 CJQ . . . D 3 -25.479 -15.861 12.887 1 65.09 ? C17 CJQ 502 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           29 
#