data_6F4D
#
_model_server_result.job_id            UxJ_Ga5uLPOUMDbDHlMP8A 
_model_server_result.datetime_utc      '2024-11-08 06:56:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6f4d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    6F4D 
#
_exptl.entry_id    6F4D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.64 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IRON/SULFUR CLUSTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.79 
_cell.angle_gamma         90 
_cell.entry_id            6F4D 
_cell.length_a            102.97 
_cell.length_b            49.17 
_cell.length_c            69.39 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6F4D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 88 A CYS 81 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc2 A SG CYS 175 A CYS 168 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc3 A SG CYS 261 A CYS 254 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc4 B FE3 SF4 . A SF4 301 1_555 C N2 PGH . A PGH 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc5 B FE3 SF4 . A SF4 301 1_555 C O2 PGH . A PGH 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.004 ? 
metalc ? metalc6 B FE3 SF4 . A SF4 301 1_555 G O HOH . A HOH 539 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.354 ? 
#
_chem_comp.formula           'Fe4 S4' 
_chem_comp.formula_weight    351.64 
_chem_comp.id                SF4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IRON/SULFUR CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 SF4 sing 309 n n 
FE1 S3 SF4 sing 310 n n 
FE1 S4 SF4 sing 311 n n 
FE2 S1 SF4 sing 312 n n 
FE2 S3 SF4 sing 313 n n 
FE2 S4 SF4 sing 314 n n 
FE3 S1 SF4 sing 315 n n 
FE3 S2 SF4 sing 316 n n 
FE3 S4 SF4 sing 317 n n 
FE4 S1 SF4 sing 318 n n 
FE4 S2 SF4 sing 319 n n 
FE4 S3 SF4 sing 320 n n 
#
_atom_sites.entry_id                     6F4D 
_atom_sites.fract_transf_matrix[1][1]    0.009712 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003116 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020338 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015135 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SF4 A 1 301 301 SF4 SF4 . 
C 3 PGH A 1 302 302 PGH PGH . 
D 4 PO4 A 1 303 303 PO4 PO4 . 
E 4 PO4 A 1 304 304 PO4 PO4 . 
F 5 CL A 1 305 305 CL CL . 
G 6 HOH A 1 401 93 HOH HOH . 
G 6 HOH A 2 402 62 HOH HOH . 
G 6 HOH A 3 403 113 HOH HOH . 
G 6 HOH A 4 404 80 HOH HOH . 
G 6 HOH A 5 405 38 HOH HOH . 
G 6 HOH A 6 406 34 HOH HOH . 
G 6 HOH A 7 407 44 HOH HOH . 
G 6 HOH A 8 408 115 HOH HOH . 
G 6 HOH A 9 409 120 HOH HOH . 
G 6 HOH A 10 410 123 HOH HOH . 
G 6 HOH A 11 411 109 HOH HOH . 
G 6 HOH A 12 412 50 HOH HOH . 
G 6 HOH A 13 413 13 HOH HOH . 
G 6 HOH A 14 414 138 HOH HOH . 
G 6 HOH A 15 415 51 HOH HOH . 
G 6 HOH A 16 416 21 HOH HOH . 
G 6 HOH A 17 417 83 HOH HOH . 
G 6 HOH A 18 418 94 HOH HOH . 
G 6 HOH A 19 419 31 HOH HOH . 
G 6 HOH A 20 420 14 HOH HOH . 
G 6 HOH A 21 421 186 HOH HOH . 
G 6 HOH A 22 422 127 HOH HOH . 
G 6 HOH A 23 423 121 HOH HOH . 
G 6 HOH A 24 424 59 HOH HOH . 
G 6 HOH A 25 425 26 HOH HOH . 
G 6 HOH A 26 426 188 HOH HOH . 
G 6 HOH A 27 427 142 HOH HOH . 
G 6 HOH A 28 428 22 HOH HOH . 
G 6 HOH A 29 429 9 HOH HOH . 
G 6 HOH A 30 430 133 HOH HOH . 
G 6 HOH A 31 431 157 HOH HOH . 
G 6 HOH A 32 432 158 HOH HOH . 
G 6 HOH A 33 433 69 HOH HOH . 
G 6 HOH A 34 434 160 HOH HOH . 
G 6 HOH A 35 435 107 HOH HOH . 
G 6 HOH A 36 436 65 HOH HOH . 
G 6 HOH A 37 437 10 HOH HOH . 
G 6 HOH A 38 438 165 HOH HOH . 
G 6 HOH A 39 439 61 HOH HOH . 
G 6 HOH A 40 440 90 HOH HOH . 
G 6 HOH A 41 441 76 HOH HOH . 
G 6 HOH A 42 442 92 HOH HOH . 
G 6 HOH A 43 443 8 HOH HOH . 
G 6 HOH A 44 444 32 HOH HOH . 
G 6 HOH A 45 445 75 HOH HOH . 
G 6 HOH A 46 446 17 HOH HOH . 
G 6 HOH A 47 447 52 HOH HOH . 
G 6 HOH A 48 448 64 HOH HOH . 
G 6 HOH A 49 449 73 HOH HOH . 
G 6 HOH A 50 450 3 HOH HOH . 
G 6 HOH A 51 451 106 HOH HOH . 
G 6 HOH A 52 452 82 HOH HOH . 
G 6 HOH A 53 453 19 HOH HOH . 
G 6 HOH A 54 454 74 HOH HOH . 
G 6 HOH A 55 455 42 HOH HOH . 
G 6 HOH A 56 456 116 HOH HOH . 
G 6 HOH A 57 457 148 HOH HOH . 
G 6 HOH A 58 458 135 HOH HOH . 
G 6 HOH A 59 459 110 HOH HOH . 
G 6 HOH A 60 460 46 HOH HOH . 
G 6 HOH A 61 461 43 HOH HOH . 
G 6 HOH A 62 462 102 HOH HOH . 
G 6 HOH A 63 463 67 HOH HOH . 
G 6 HOH A 64 464 6 HOH HOH . 
G 6 HOH A 65 465 168 HOH HOH . 
G 6 HOH A 66 466 85 HOH HOH . 
G 6 HOH A 67 467 97 HOH HOH . 
G 6 HOH A 68 468 126 HOH HOH . 
G 6 HOH A 69 469 15 HOH HOH . 
G 6 HOH A 70 470 58 HOH HOH . 
G 6 HOH A 71 471 7 HOH HOH . 
G 6 HOH A 72 472 27 HOH HOH . 
G 6 HOH A 73 473 54 HOH HOH . 
G 6 HOH A 74 474 45 HOH HOH . 
G 6 HOH A 75 475 180 HOH HOH . 
G 6 HOH A 76 476 37 HOH HOH . 
G 6 HOH A 77 477 104 HOH HOH . 
G 6 HOH A 78 478 96 HOH HOH . 
G 6 HOH A 79 479 167 HOH HOH . 
G 6 HOH A 80 480 166 HOH HOH . 
G 6 HOH A 81 481 124 HOH HOH . 
G 6 HOH A 82 482 68 HOH HOH . 
G 6 HOH A 83 483 2 HOH HOH . 
G 6 HOH A 84 484 35 HOH HOH . 
G 6 HOH A 85 485 146 HOH HOH . 
G 6 HOH A 86 486 162 HOH HOH . 
G 6 HOH A 87 487 5 HOH HOH . 
G 6 HOH A 88 488 173 HOH HOH . 
G 6 HOH A 89 489 153 HOH HOH . 
G 6 HOH A 90 490 100 HOH HOH . 
G 6 HOH A 91 491 1 HOH HOH . 
G 6 HOH A 92 492 39 HOH HOH . 
G 6 HOH A 93 493 105 HOH HOH . 
G 6 HOH A 94 494 66 HOH HOH . 
G 6 HOH A 95 495 48 HOH HOH . 
G 6 HOH A 96 496 24 HOH HOH . 
G 6 HOH A 97 497 71 HOH HOH . 
G 6 HOH A 98 498 119 HOH HOH . 
G 6 HOH A 99 499 145 HOH HOH . 
G 6 HOH A 100 500 41 HOH HOH . 
G 6 HOH A 101 501 172 HOH HOH . 
G 6 HOH A 102 502 130 HOH HOH . 
G 6 HOH A 103 503 88 HOH HOH . 
G 6 HOH A 104 504 18 HOH HOH . 
G 6 HOH A 105 505 139 HOH HOH . 
G 6 HOH A 106 506 12 HOH HOH . 
G 6 HOH A 107 507 178 HOH HOH . 
G 6 HOH A 108 508 129 HOH HOH . 
G 6 HOH A 109 509 152 HOH HOH . 
G 6 HOH A 110 510 111 HOH HOH . 
G 6 HOH A 111 511 25 HOH HOH . 
G 6 HOH A 112 512 98 HOH HOH . 
G 6 HOH A 113 513 56 HOH HOH . 
G 6 HOH A 114 514 23 HOH HOH . 
G 6 HOH A 115 515 4 HOH HOH . 
G 6 HOH A 116 516 112 HOH HOH . 
G 6 HOH A 117 517 122 HOH HOH . 
G 6 HOH A 118 518 128 HOH HOH . 
G 6 HOH A 119 519 60 HOH HOH . 
G 6 HOH A 120 520 16 HOH HOH . 
G 6 HOH A 121 521 30 HOH HOH . 
G 6 HOH A 122 522 177 HOH HOH . 
G 6 HOH A 123 523 154 HOH HOH . 
G 6 HOH A 124 524 181 HOH HOH . 
G 6 HOH A 125 525 174 HOH HOH . 
G 6 HOH A 126 526 118 HOH HOH . 
G 6 HOH A 127 527 131 HOH HOH . 
G 6 HOH A 128 528 36 HOH HOH . 
G 6 HOH A 129 529 175 HOH HOH . 
G 6 HOH A 130 530 171 HOH HOH . 
G 6 HOH A 131 531 137 HOH HOH . 
G 6 HOH A 132 532 155 HOH HOH . 
G 6 HOH A 133 533 169 HOH HOH . 
G 6 HOH A 134 534 95 HOH HOH . 
G 6 HOH A 135 535 132 HOH HOH . 
G 6 HOH A 136 536 99 HOH HOH . 
G 6 HOH A 137 537 103 HOH HOH . 
G 6 HOH A 138 538 150 HOH HOH . 
G 6 HOH A 139 539 144 HOH HOH . 
G 6 HOH A 140 540 29 HOH HOH . 
G 6 HOH A 141 541 147 HOH HOH . 
G 6 HOH A 142 542 11 HOH HOH . 
G 6 HOH A 143 543 136 HOH HOH . 
G 6 HOH A 144 544 125 HOH HOH . 
G 6 HOH A 145 545 79 HOH HOH . 
G 6 HOH A 146 546 63 HOH HOH . 
G 6 HOH A 147 547 108 HOH HOH . 
G 6 HOH A 148 548 57 HOH HOH . 
G 6 HOH A 149 549 89 HOH HOH . 
G 6 HOH A 150 550 187 HOH HOH . 
G 6 HOH A 151 551 182 HOH HOH . 
G 6 HOH A 152 552 143 HOH HOH . 
G 6 HOH A 153 553 183 HOH HOH . 
G 6 HOH A 154 554 141 HOH HOH . 
G 6 HOH A 155 555 149 HOH HOH . 
G 6 HOH A 156 556 163 HOH HOH . 
G 6 HOH A 157 557 86 HOH HOH . 
G 6 HOH A 158 558 81 HOH HOH . 
G 6 HOH A 159 559 20 HOH HOH . 
G 6 HOH A 160 560 91 HOH HOH . 
G 6 HOH A 161 561 190 HOH HOH . 
G 6 HOH A 162 562 84 HOH HOH . 
G 6 HOH A 163 563 47 HOH HOH . 
G 6 HOH A 164 564 185 HOH HOH . 
G 6 HOH A 165 565 49 HOH HOH . 
G 6 HOH A 166 566 179 HOH HOH . 
G 6 HOH A 167 567 189 HOH HOH . 
G 6 HOH A 168 568 101 HOH HOH . 
G 6 HOH A 169 569 161 HOH HOH . 
G 6 HOH A 170 570 117 HOH HOH . 
G 6 HOH A 171 571 55 HOH HOH . 
G 6 HOH A 172 572 176 HOH HOH . 
G 6 HOH A 173 573 159 HOH HOH . 
G 6 HOH A 174 574 77 HOH HOH . 
G 6 HOH A 175 575 184 HOH HOH . 
G 6 HOH A 176 576 140 HOH HOH . 
G 6 HOH A 177 577 156 HOH HOH . 
G 6 HOH A 178 578 170 HOH HOH . 
G 6 HOH A 179 579 87 HOH HOH . 
G 6 HOH A 180 580 78 HOH HOH . 
G 6 HOH A 181 581 33 HOH HOH . 
G 6 HOH A 182 582 114 HOH HOH . 
G 6 HOH A 183 583 164 HOH HOH . 
G 6 HOH A 184 584 72 HOH HOH . 
G 6 HOH A 185 585 28 HOH HOH . 
G 6 HOH A 186 586 70 HOH HOH . 
G 6 HOH A 187 587 151 HOH HOH . 
G 6 HOH A 188 588 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 SF4 . . . B 2 108.735 -6.565 84.53 1 32.24 ? FE1 SF4 301 A 1 
HETATM 2 FE FE2 SF4 . . . B 2 106.31 -7.89 84.431 1 34.36 ? FE2 SF4 301 A 1 
HETATM 3 FE FE3 SF4 . . . B 2 106.437 -4.972 84.205 1 34.36 ? FE3 SF4 301 A 1 
HETATM 4 FE FE4 SF4 . . . B 2 106.963 -6.353 86.623 1 32.71 ? FE4 SF4 301 A 1 
HETATM 5 S S1 SF4 . . . B 2 104.966 -6.369 85.555 1 33.74 ? S1 SF4 301 A 1 
HETATM 6 S S2 SF4 . . . B 2 108.226 -4.605 85.67 1 32.07 ? S2 SF4 301 A 1 
HETATM 7 S S3 SF4 . . . B 2 108.104 -8.293 85.9 1 33.98 ? S3 SF4 301 A 1 
HETATM 8 S S4 SF4 . . . B 2 107.318 -6.609 82.735 1 32.79 ? S4 SF4 301 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#