data_6F4L # _model_server_result.job_id zVs1KTSv-7OoMicYlfhGKQ _model_server_result.datetime_utc '2024-11-24 03:27:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6F4L # _exptl.entry_id 6F4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 167.119 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'QUINOLINIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.21 _cell.angle_gamma 90 _cell.entry_id 6F4L _cell.length_a 55.44 _cell.length_b 49.31 _cell.length_c 61.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 88 A CYS 81 1_555 B FE4 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc2 A SG CYS 175 A CYS 168 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 A SG CYS 261 A CYS 254 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'C7 H5 N O4' _chem_comp.formula_weight 167.119 _chem_comp.id NTM _chem_comp.mon_nstd_flag . _chem_comp.name 'QUINOLINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 NTM doub 267 n y N1 C6 NTM sing 268 n y C2 C3 NTM sing 269 n y C2 C7 NTM sing 270 n n C3 C4 NTM doub 271 n y C3 C8 NTM sing 272 n n C4 C5 NTM sing 273 n y C4 H4 NTM sing 274 n n C5 C6 NTM doub 275 n y C5 H5 NTM sing 276 n n C6 H6 NTM sing 277 n n C7 O1 NTM doub 278 n n C7 O2 NTM sing 279 n n O2 HO2 NTM sing 280 n n C8 O3 NTM doub 281 n n C8 O4 NTM sing 282 n n O4 HO4 NTM sing 283 n n # _atom_sites.entry_id 6F4L _atom_sites.fract_transf_matrix[1][1] 0.018038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005588 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016913 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 301 SF4 SF4 . C 3 NTM A 1 302 311 NTM NTM . D 4 CL A 1 303 312 CL CL . E 5 NHE A 1 304 313 NHE NHE . F 6 HOH A 1 401 28 HOH HOH . F 6 HOH A 2 402 29 HOH HOH . F 6 HOH A 3 403 30 HOH HOH . F 6 HOH A 4 404 6 HOH HOH . F 6 HOH A 5 405 36 HOH HOH . F 6 HOH A 6 406 12 HOH HOH . F 6 HOH A 7 407 37 HOH HOH . F 6 HOH A 8 408 2 HOH HOH . F 6 HOH A 9 409 3 HOH HOH . F 6 HOH A 10 410 8 HOH HOH . F 6 HOH A 11 411 31 HOH HOH . F 6 HOH A 12 412 22 HOH HOH . F 6 HOH A 13 413 7 HOH HOH . F 6 HOH A 14 414 11 HOH HOH . F 6 HOH A 15 415 1 HOH HOH . F 6 HOH A 16 416 19 HOH HOH . F 6 HOH A 17 417 33 HOH HOH . F 6 HOH A 18 418 13 HOH HOH . F 6 HOH A 19 419 10 HOH HOH . F 6 HOH A 20 420 4 HOH HOH . F 6 HOH A 21 421 9 HOH HOH . F 6 HOH A 22 422 20 HOH HOH . F 6 HOH A 23 423 26 HOH HOH . F 6 HOH A 24 424 18 HOH HOH . F 6 HOH A 25 425 24 HOH HOH . F 6 HOH A 26 426 34 HOH HOH . F 6 HOH A 27 427 16 HOH HOH . F 6 HOH A 28 428 14 HOH HOH . F 6 HOH A 29 429 5 HOH HOH . F 6 HOH A 30 430 27 HOH HOH . F 6 HOH A 31 431 25 HOH HOH . F 6 HOH A 32 432 15 HOH HOH . F 6 HOH A 33 433 17 HOH HOH . F 6 HOH A 34 434 35 HOH HOH . F 6 HOH A 35 435 21 HOH HOH . F 6 HOH A 36 436 32 HOH HOH . F 6 HOH A 37 437 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NTM . . . C 3 11.64 0.145 10.921 1 74.79 ? N1 NTM 302 A 1 HETATM 2 C C2 NTM . . . C 3 10.956 0.888 11.808 1 75.38 ? C2 NTM 302 A 1 HETATM 3 C C3 NTM . . . C 3 11.199 0.667 13.259 1 74.07 ? C3 NTM 302 A 1 HETATM 4 C C4 NTM . . . C 3 12.11 -0.299 13.611 1 75.31 ? C4 NTM 302 A 1 HETATM 5 C C5 NTM . . . C 3 12.763 -1.029 12.635 1 75.57 ? C5 NTM 302 A 1 HETATM 6 C C6 NTM . . . C 3 12.509 -0.788 11.3 1 74.73 ? C6 NTM 302 A 1 HETATM 7 C C7 NTM . . . C 3 9.991 1.895 11.264 1 76.06 ? C7 NTM 302 A 1 HETATM 8 O O1 NTM . . . C 3 9.933 2.068 10.038 1 76.19 ? O1 NTM 302 A 1 HETATM 9 O O2 NTM . . . C 3 9.259 2.537 12.026 1 77.46 ? O2 NTM 302 A 1 HETATM 10 C C8 NTM . . . C 3 10.518 1.41 14.348 1 71.58 ? C8 NTM 302 A 1 HETATM 11 O O3 NTM . . . C 3 10.984 2.465 14.717 1 70.44 ? O3 NTM 302 A 1 HETATM 12 O O4 NTM . . . C 3 9.516 0.956 14.893 1 72.1 ? O4 NTM 302 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 12 #