data_6F6B
#
_model_server_result.job_id            C7sREk6a4Ja7mixoFw5pDQ 
_model_server_result.datetime_utc      '2024-10-15 11:25:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6f6b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    6F6B 
#
_exptl.entry_id    6F6B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6F6B 
_cell.length_a            55.983 
_cell.length_b            98.065 
_cell.length_c            127.626 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6F6B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 83 A GLU 69 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc2 A OE2 GLU 116 A GLU 102 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc3 A OE1 GLU 116 A GLU 102 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc4 A ND1 HIS 119 A HIS 105 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc5 A NE2 HIS 144 A HIS 130 1_555 C FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc6 A OE1 GLU 181 A GLU 167 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc7 A OE2 GLU 181 A GLU 167 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? 
metalc ? metalc8 A OE1 GLU 216 A GLU 202 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc9 A OE2 GLU 216 A GLU 202 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc10 A OE2 GLU 216 A GLU 202 1_555 D MN MN . A MN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc11 A ND1 HIS 219 A HIS 205 1_555 B FE FE2 . A FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
metalc ? metalc12 C FE FE2 . A FE2 402 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc13 C FE FE2 . A FE2 402 1_555 E O HOH . A HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc14 C FE FE2 . A FE2 402 1_555 E O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? 
metalc ? metalc15 C FE FE2 . A FE2 402 1_555 E O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? 
metalc ? metalc16 D MN MN . A MN 403 1_555 E O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6F6B 
_atom_sites.fract_transf_matrix[1][1]    0.017863 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010197 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007835 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE2 A 1 401 1 FE2 FE . 
C 2 FE2 A 1 402 2 FE2 FE . 
D 3 MN A 1 403 1 MN MN . 
E 4 HOH A 1 501 48 HOH HOH . 
E 4 HOH A 2 502 14 HOH HOH . 
E 4 HOH A 3 503 40 HOH HOH . 
E 4 HOH A 4 504 6 HOH HOH . 
E 4 HOH A 5 505 25 HOH HOH . 
E 4 HOH A 6 506 2 HOH HOH . 
E 4 HOH A 7 507 5 HOH HOH . 
E 4 HOH A 8 508 3 HOH HOH . 
E 4 HOH A 9 509 16 HOH HOH . 
E 4 HOH A 10 510 9 HOH HOH . 
E 4 HOH A 11 511 35 HOH HOH . 
E 4 HOH A 12 512 29 HOH HOH . 
E 4 HOH A 13 513 53 HOH HOH . 
E 4 HOH A 14 514 30 HOH HOH . 
E 4 HOH A 15 515 12 HOH HOH . 
E 4 HOH A 16 516 18 HOH HOH . 
E 4 HOH A 17 517 17 HOH HOH . 
E 4 HOH A 18 518 39 HOH HOH . 
E 4 HOH A 19 519 1 HOH HOH . 
E 4 HOH A 20 520 4 HOH HOH . 
E 4 HOH A 21 521 31 HOH HOH . 
E 4 HOH A 22 522 41 HOH HOH . 
E 4 HOH A 23 523 24 HOH HOH . 
E 4 HOH A 24 524 7 HOH HOH . 
E 4 HOH A 25 525 21 HOH HOH . 
E 4 HOH A 26 526 43 HOH HOH . 
E 4 HOH A 27 527 34 HOH HOH . 
E 4 HOH A 28 528 28 HOH HOH . 
E 4 HOH A 29 529 8 HOH HOH . 
E 4 HOH A 30 530 38 HOH HOH . 
E 4 HOH A 31 531 37 HOH HOH . 
E 4 HOH A 32 532 19 HOH HOH . 
E 4 HOH A 33 533 42 HOH HOH . 
E 4 HOH A 34 534 20 HOH HOH . 
E 4 HOH A 35 535 51 HOH HOH . 
E 4 HOH A 36 536 26 HOH HOH . 
E 4 HOH A 37 537 10 HOH HOH . 
E 4 HOH A 38 538 47 HOH HOH . 
E 4 HOH A 39 539 22 HOH HOH . 
E 4 HOH A 40 540 11 HOH HOH . 
E 4 HOH A 41 541 36 HOH HOH . 
E 4 HOH A 42 542 44 HOH HOH . 
E 4 HOH A 43 543 49 HOH HOH . 
E 4 HOH A 44 544 32 HOH HOH . 
E 4 HOH A 45 545 13 HOH HOH . 
E 4 HOH A 46 546 23 HOH HOH . 
E 4 HOH A 47 547 45 HOH HOH . 
E 4 HOH A 48 548 55 HOH HOH . 
E 4 HOH A 49 549 52 HOH HOH . 
E 4 HOH A 50 550 54 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -7.467 
_atom_site.Cartn_y               10.493 
_atom_site.Cartn_z               23.267 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.01 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           403 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#