data_6F7H # _model_server_result.job_id aHPYICFNX8NxdPh5yBPBUA _model_server_result.datetime_utc '2024-12-22 06:26:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f7h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":404}' # _entry.id 6F7H # _exptl.entry_id 6F7H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6F7H _cell.length_a 97.071 _cell.length_b 116.844 _cell.length_c 138.549 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F7H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 P N N ? 3 Q N N ? 3 V N N ? 3 Z N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 180 n n C1 C2 GOL sing 181 n n C1 H11 GOL sing 182 n n C1 H12 GOL sing 183 n n O1 HO1 GOL sing 184 n n C2 O2 GOL sing 185 n n C2 C3 GOL sing 186 n n C2 H2 GOL sing 187 n n O2 HO2 GOL sing 188 n n C3 O3 GOL sing 189 n n C3 H31 GOL sing 190 n n C3 H32 GOL sing 191 n n O3 HO3 GOL sing 192 n n # _atom_sites.entry_id 6F7H _atom_sites.fract_transf_matrix[1][1] 0.010302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BNG A 1 401 5 BNG BNG . F 2 BNG A 1 402 16 BNG BNG . G 2 BNG A 1 403 17 BNG BNG . H 3 GOL A 1 404 1 GOL GOL . I 3 GOL A 1 405 6 GOL GOL . J 2 BNG B 1 401 2 BNG BNG . K 2 BNG B 1 402 7 BNG BNG . L 2 BNG B 1 403 11 BNG BNG . M 2 BNG B 1 404 13 BNG BNG . N 2 BNG B 1 405 14 BNG BNG . O 2 BNG B 1 406 21 BNG BNG . P 3 GOL B 1 407 2 GOL GOL . Q 3 GOL B 1 408 7 GOL GOL . R 2 BNG C 1 401 4 BNG BNG . S 2 BNG C 1 402 10 BNG BNG . T 2 BNG C 1 403 15 BNG BNG . U 2 BNG C 1 404 22 BNG BNG . V 3 GOL C 1 405 4 GOL GOL . W 2 BNG D 1 401 3 BNG BNG . X 2 BNG D 1 402 12 BNG BNG . Y 2 BNG D 1 403 19 BNG BNG . Z 3 GOL D 1 404 3 GOL GOL . AA 4 HOH A 1 501 168 HOH HOH . AA 4 HOH A 2 502 220 HOH HOH . AA 4 HOH A 3 503 215 HOH HOH . AA 4 HOH A 4 504 38 HOH HOH . AA 4 HOH A 5 505 127 HOH HOH . AA 4 HOH A 6 506 7 HOH HOH . AA 4 HOH A 7 507 78 HOH HOH . AA 4 HOH A 8 508 46 HOH HOH . AA 4 HOH A 9 509 204 HOH HOH . AA 4 HOH A 10 510 84 HOH HOH . AA 4 HOH A 11 511 41 HOH HOH . AA 4 HOH A 12 512 70 HOH HOH . AA 4 HOH A 13 513 98 HOH HOH . AA 4 HOH A 14 514 188 HOH HOH . AA 4 HOH A 15 515 1 HOH HOH . AA 4 HOH A 16 516 10 HOH HOH . AA 4 HOH A 17 517 109 HOH HOH . AA 4 HOH A 18 518 208 HOH HOH . AA 4 HOH A 19 519 24 HOH HOH . AA 4 HOH A 20 520 85 HOH HOH . AA 4 HOH A 21 521 60 HOH HOH . AA 4 HOH A 22 522 179 HOH HOH . AA 4 HOH A 23 523 13 HOH HOH . AA 4 HOH A 24 524 4 HOH HOH . AA 4 HOH A 25 525 152 HOH HOH . AA 4 HOH A 26 526 146 HOH HOH . AA 4 HOH A 27 527 230 HOH HOH . AA 4 HOH A 28 528 62 HOH HOH . AA 4 HOH A 29 529 56 HOH HOH . AA 4 HOH A 30 530 99 HOH HOH . AA 4 HOH A 31 531 17 HOH HOH . AA 4 HOH A 32 532 171 HOH HOH . AA 4 HOH A 33 533 191 HOH HOH . AA 4 HOH A 34 534 31 HOH HOH . AA 4 HOH A 35 535 5 HOH HOH . AA 4 HOH A 36 536 219 HOH HOH . AA 4 HOH A 37 537 22 HOH HOH . AA 4 HOH A 38 538 21 HOH HOH . AA 4 HOH A 39 539 97 HOH HOH . AA 4 HOH A 40 540 150 HOH HOH . AA 4 HOH A 41 541 156 HOH HOH . AA 4 HOH A 42 542 240 HOH HOH . AA 4 HOH A 43 543 34 HOH HOH . AA 4 HOH A 44 544 37 HOH HOH . AA 4 HOH A 45 545 40 HOH HOH . AA 4 HOH A 46 546 180 HOH HOH . AA 4 HOH A 47 547 106 HOH HOH . AA 4 HOH A 48 548 103 HOH HOH . AA 4 HOH A 49 549 74 HOH HOH . AA 4 HOH A 50 550 50 HOH HOH . AA 4 HOH A 51 551 82 HOH HOH . AA 4 HOH A 52 552 123 HOH HOH . AA 4 HOH A 53 553 83 HOH HOH . AA 4 HOH A 54 554 265 HOH HOH . AA 4 HOH A 55 555 80 HOH HOH . AA 4 HOH A 56 556 203 HOH HOH . AA 4 HOH A 57 557 29 HOH HOH . AA 4 HOH A 58 558 248 HOH HOH . AA 4 HOH A 59 559 91 HOH HOH . AA 4 HOH A 60 560 117 HOH HOH . AA 4 HOH A 61 561 209 HOH HOH . AA 4 HOH A 62 562 222 HOH HOH . AA 4 HOH A 63 563 96 HOH HOH . AA 4 HOH A 64 564 226 HOH HOH . AA 4 HOH A 65 565 104 HOH HOH . AA 4 HOH A 66 566 89 HOH HOH . AA 4 HOH A 67 567 227 HOH HOH . AA 4 HOH A 68 568 264 HOH HOH . AA 4 HOH A 69 569 214 HOH HOH . AA 4 HOH A 70 570 154 HOH HOH . AA 4 HOH A 71 571 166 HOH HOH . AA 4 HOH A 72 572 155 HOH HOH . AA 4 HOH A 73 573 162 HOH HOH . AA 4 HOH A 74 574 267 HOH HOH . AA 4 HOH A 75 575 132 HOH HOH . AA 4 HOH A 76 576 120 HOH HOH . AA 4 HOH A 77 577 235 HOH HOH . AA 4 HOH A 78 578 119 HOH HOH . AA 4 HOH A 79 579 135 HOH HOH . BA 4 HOH B 1 501 172 HOH HOH . BA 4 HOH B 2 502 33 HOH HOH . BA 4 HOH B 3 503 126 HOH HOH . BA 4 HOH B 4 504 51 HOH HOH . BA 4 HOH B 5 505 86 HOH HOH . BA 4 HOH B 6 506 207 HOH HOH . BA 4 HOH B 7 507 54 HOH HOH . BA 4 HOH B 8 508 8 HOH HOH . BA 4 HOH B 9 509 92 HOH HOH . BA 4 HOH B 10 510 45 HOH HOH . BA 4 HOH B 11 511 71 HOH HOH . BA 4 HOH B 12 512 167 HOH HOH . BA 4 HOH B 13 513 9 HOH HOH . BA 4 HOH B 14 514 237 HOH HOH . BA 4 HOH B 15 515 36 HOH HOH . BA 4 HOH B 16 516 16 HOH HOH . BA 4 HOH B 17 517 2 HOH HOH . BA 4 HOH B 18 518 165 HOH HOH . BA 4 HOH B 19 519 143 HOH HOH . BA 4 HOH B 20 520 59 HOH HOH . BA 4 HOH B 21 521 28 HOH HOH . BA 4 HOH B 22 522 193 HOH HOH . BA 4 HOH B 23 523 87 HOH HOH . BA 4 HOH B 24 524 15 HOH HOH . BA 4 HOH B 25 525 221 HOH HOH . BA 4 HOH B 26 526 79 HOH HOH . BA 4 HOH B 27 527 149 HOH HOH . BA 4 HOH B 28 528 65 HOH HOH . BA 4 HOH B 29 529 73 HOH HOH . BA 4 HOH B 30 530 270 HOH HOH . BA 4 HOH B 31 531 11 HOH HOH . BA 4 HOH B 32 532 68 HOH HOH . BA 4 HOH B 33 533 107 HOH HOH . BA 4 HOH B 34 534 245 HOH HOH . BA 4 HOH B 35 535 55 HOH HOH . BA 4 HOH B 36 536 158 HOH HOH . BA 4 HOH B 37 537 77 HOH HOH . BA 4 HOH B 38 538 100 HOH HOH . BA 4 HOH B 39 539 48 HOH HOH . BA 4 HOH B 40 540 25 HOH HOH . BA 4 HOH B 41 541 53 HOH HOH . BA 4 HOH B 42 542 95 HOH HOH . BA 4 HOH B 43 543 252 HOH HOH . BA 4 HOH B 44 544 223 HOH HOH . BA 4 HOH B 45 545 206 HOH HOH . BA 4 HOH B 46 546 133 HOH HOH . BA 4 HOH B 47 547 200 HOH HOH . BA 4 HOH B 48 548 190 HOH HOH . BA 4 HOH B 49 549 124 HOH HOH . BA 4 HOH B 50 550 164 HOH HOH . BA 4 HOH B 51 551 195 HOH HOH . BA 4 HOH B 52 552 130 HOH HOH . BA 4 HOH B 53 553 205 HOH HOH . BA 4 HOH B 54 554 182 HOH HOH . BA 4 HOH B 55 555 151 HOH HOH . BA 4 HOH B 56 556 114 HOH HOH . BA 4 HOH B 57 557 271 HOH HOH . BA 4 HOH B 58 558 147 HOH HOH . BA 4 HOH B 59 559 268 HOH HOH . BA 4 HOH B 60 560 249 HOH HOH . BA 4 HOH B 61 561 254 HOH HOH . BA 4 HOH B 62 562 183 HOH HOH . BA 4 HOH B 63 563 177 HOH HOH . BA 4 HOH B 64 564 202 HOH HOH . BA 4 HOH B 65 565 196 HOH HOH . BA 4 HOH B 66 566 224 HOH HOH . BA 4 HOH B 67 567 184 HOH HOH . BA 4 HOH B 68 568 241 HOH HOH . BA 4 HOH B 69 569 185 HOH HOH . CA 4 HOH C 1 501 163 HOH HOH . CA 4 HOH C 2 502 238 HOH HOH . CA 4 HOH C 3 503 232 HOH HOH . CA 4 HOH C 4 504 251 HOH HOH . CA 4 HOH C 5 505 186 HOH HOH . CA 4 HOH C 6 506 197 HOH HOH . CA 4 HOH C 7 507 44 HOH HOH . CA 4 HOH C 8 508 137 HOH HOH . CA 4 HOH C 9 509 12 HOH HOH . CA 4 HOH C 10 510 49 HOH HOH . CA 4 HOH C 11 511 239 HOH HOH . CA 4 HOH C 12 512 131 HOH HOH . CA 4 HOH C 13 513 3 HOH HOH . CA 4 HOH C 14 514 42 HOH HOH . CA 4 HOH C 15 515 216 HOH HOH . CA 4 HOH C 16 516 76 HOH HOH . CA 4 HOH C 17 517 69 HOH HOH . CA 4 HOH C 18 518 6 HOH HOH . CA 4 HOH C 19 519 187 HOH HOH . CA 4 HOH C 20 520 18 HOH HOH . CA 4 HOH C 21 521 112 HOH HOH . CA 4 HOH C 22 522 136 HOH HOH . CA 4 HOH C 23 523 94 HOH HOH . CA 4 HOH C 24 524 27 HOH HOH . CA 4 HOH C 25 525 64 HOH HOH . CA 4 HOH C 26 526 81 HOH HOH . CA 4 HOH C 27 527 148 HOH HOH . CA 4 HOH C 28 528 110 HOH HOH . CA 4 HOH C 29 529 250 HOH HOH . CA 4 HOH C 30 530 175 HOH HOH . CA 4 HOH C 31 531 228 HOH HOH . CA 4 HOH C 32 532 253 HOH HOH . CA 4 HOH C 33 533 47 HOH HOH . CA 4 HOH C 34 534 125 HOH HOH . CA 4 HOH C 35 535 160 HOH HOH . CA 4 HOH C 36 536 261 HOH HOH . CA 4 HOH C 37 537 244 HOH HOH . CA 4 HOH C 38 538 272 HOH HOH . CA 4 HOH C 39 539 170 HOH HOH . CA 4 HOH C 40 540 139 HOH HOH . CA 4 HOH C 41 541 61 HOH HOH . CA 4 HOH C 42 542 269 HOH HOH . CA 4 HOH C 43 543 113 HOH HOH . CA 4 HOH C 44 544 129 HOH HOH . CA 4 HOH C 45 545 231 HOH HOH . CA 4 HOH C 46 546 263 HOH HOH . CA 4 HOH C 47 547 140 HOH HOH . CA 4 HOH C 48 548 212 HOH HOH . CA 4 HOH C 49 549 256 HOH HOH . CA 4 HOH C 50 550 174 HOH HOH . CA 4 HOH C 51 551 141 HOH HOH . CA 4 HOH C 52 552 229 HOH HOH . CA 4 HOH C 53 553 173 HOH HOH . CA 4 HOH C 54 554 157 HOH HOH . CA 4 HOH C 55 555 159 HOH HOH . DA 4 HOH D 1 501 201 HOH HOH . DA 4 HOH D 2 502 260 HOH HOH . DA 4 HOH D 3 503 258 HOH HOH . DA 4 HOH D 4 504 63 HOH HOH . DA 4 HOH D 5 505 169 HOH HOH . DA 4 HOH D 6 506 138 HOH HOH . DA 4 HOH D 7 507 236 HOH HOH . DA 4 HOH D 8 508 52 HOH HOH . DA 4 HOH D 9 509 93 HOH HOH . DA 4 HOH D 10 510 39 HOH HOH . DA 4 HOH D 11 511 26 HOH HOH . DA 4 HOH D 12 512 32 HOH HOH . DA 4 HOH D 13 513 105 HOH HOH . DA 4 HOH D 14 514 66 HOH HOH . DA 4 HOH D 15 515 142 HOH HOH . DA 4 HOH D 16 516 19 HOH HOH . DA 4 HOH D 17 517 43 HOH HOH . DA 4 HOH D 18 518 128 HOH HOH . DA 4 HOH D 19 519 102 HOH HOH . DA 4 HOH D 20 520 111 HOH HOH . DA 4 HOH D 21 521 153 HOH HOH . DA 4 HOH D 22 522 57 HOH HOH . DA 4 HOH D 23 523 118 HOH HOH . DA 4 HOH D 24 524 35 HOH HOH . DA 4 HOH D 25 525 67 HOH HOH . DA 4 HOH D 26 526 20 HOH HOH . DA 4 HOH D 27 527 255 HOH HOH . DA 4 HOH D 28 528 101 HOH HOH . DA 4 HOH D 29 529 75 HOH HOH . DA 4 HOH D 30 530 14 HOH HOH . DA 4 HOH D 31 531 23 HOH HOH . DA 4 HOH D 32 532 225 HOH HOH . DA 4 HOH D 33 533 30 HOH HOH . DA 4 HOH D 34 534 257 HOH HOH . DA 4 HOH D 35 535 218 HOH HOH . DA 4 HOH D 36 536 161 HOH HOH . DA 4 HOH D 37 537 58 HOH HOH . DA 4 HOH D 38 538 108 HOH HOH . DA 4 HOH D 39 539 198 HOH HOH . DA 4 HOH D 40 540 242 HOH HOH . DA 4 HOH D 41 541 213 HOH HOH . DA 4 HOH D 42 542 72 HOH HOH . DA 4 HOH D 43 543 234 HOH HOH . DA 4 HOH D 44 544 178 HOH HOH . DA 4 HOH D 45 545 247 HOH HOH . DA 4 HOH D 46 546 176 HOH HOH . DA 4 HOH D 47 547 90 HOH HOH . DA 4 HOH D 48 548 211 HOH HOH . DA 4 HOH D 49 549 134 HOH HOH . DA 4 HOH D 50 550 144 HOH HOH . DA 4 HOH D 51 551 243 HOH HOH . DA 4 HOH D 52 552 210 HOH HOH . DA 4 HOH D 53 553 145 HOH HOH . DA 4 HOH D 54 554 192 HOH HOH . DA 4 HOH D 55 555 88 HOH HOH . DA 4 HOH D 56 556 217 HOH HOH . DA 4 HOH D 57 557 262 HOH HOH . DA 4 HOH D 58 558 194 HOH HOH . DA 4 HOH D 59 559 246 HOH HOH . DA 4 HOH D 60 560 189 HOH HOH . DA 4 HOH D 61 561 115 HOH HOH . DA 4 HOH D 62 562 259 HOH HOH . DA 4 HOH D 63 563 116 HOH HOH . DA 4 HOH D 64 564 233 HOH HOH . DA 4 HOH D 65 565 199 HOH HOH . DA 4 HOH D 66 566 181 HOH HOH . DA 4 HOH D 67 567 266 HOH HOH . DA 4 HOH D 68 568 121 HOH HOH . DA 4 HOH D 69 569 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . Z 3 69.123 52.682 50.641 1 63.17 ? C1 GOL 404 D 1 HETATM 2 O O1 GOL . . . Z 3 67.92 53.223 50.088 1 65.41 ? O1 GOL 404 D 1 HETATM 3 C C2 GOL . . . Z 3 70.367 53.384 50.094 1 59.91 ? C2 GOL 404 D 1 HETATM 4 O O2 GOL . . . Z 3 70.267 54.785 50.14 1 60.07 ? O2 GOL 404 D 1 HETATM 5 C C3 GOL . . . Z 3 71.679 52.905 50.695 1 56.42 ? C3 GOL 404 D 1 HETATM 6 O O3 GOL . . . Z 3 72.655 52.944 49.677 1 54.08 ? O3 GOL 404 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #