data_6F7I # _model_server_result.job_id RHw5-il6a2G774QdW_LDfA _model_server_result.datetime_utc '2024-11-08 11:52:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 6F7I # _exptl.entry_id 6F7I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 478.332 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[2-chloranyl-7-[(1~{S})-1-methoxyethyl]pyrazolo[1,5-a]pyrimidin-6-yl]-3-(5-chloranyl-6-pyrrolidin-1-ylcarbonyl-pyridin-3-yl)urea _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.79 _cell.angle_gamma 90 _cell.entry_id 6F7I _cell.length_a 64.2 _cell.length_b 108.97 _cell.length_c 73.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 328 A GLU 652 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc2 A OE2 GLU 329 A GLU 653 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? # _chem_comp.formula 'C20 H21 Cl2 N7 O3' _chem_comp.formula_weight 478.332 _chem_comp.id CW5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[2-chloranyl-7-[(1~{S})-1-methoxyethyl]pyrazolo[1,5-a]pyrimidin-6-yl]-3-(5-chloranyl-6-pyrrolidin-1-ylcarbonyl-pyridin-3-yl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N14 C15 CW5 doub 70 n y N14 C16 CW5 sing 71 n y C15 C12 CW5 sing 72 n y C20 C16 CW5 doub 73 n y C20 C19 CW5 sing 74 n y C16 N17 CW5 sing 75 n y C12 N25 CW5 sing 76 n n C12 C13 CW5 doub 77 n y O27 C26 CW5 doub 78 n n N25 C26 CW5 sing 79 n n C26 N11 CW5 sing 80 n n O9 C8 CW5 doub 81 n n N17 C13 CW5 sing 82 n y N17 N18 CW5 sing 83 n y CL7 C3 CW5 sing 84 n n C2 C3 CW5 doub 85 n y C2 C1 CW5 sing 86 n y C19 CL2 CW5 sing 87 n n C19 N18 CW5 doub 88 n y N11 C1 CW5 sing 89 n n C13 C22 CW5 sing 90 n n C3 C4 CW5 sing 91 n y C1 C6 CW5 doub 92 n y C4 N5 CW5 doub 93 n y C4 C8 CW5 sing 94 n n C6 N5 CW5 sing 95 n y C8 N10 CW5 sing 96 n n C24 C22 CW5 sing 97 n n C22 O23 CW5 sing 98 n n N10 C29 CW5 sing 99 n n N10 C32 CW5 sing 100 n n C29 C30 CW5 sing 101 n n O23 C28 CW5 sing 102 n n C32 C31 CW5 sing 103 n n C30 C31 CW5 sing 104 n n C2 H1 CW5 sing 105 n n C15 H2 CW5 sing 106 n n C20 H3 CW5 sing 107 n n C22 H4 CW5 sing 108 n n C24 H5 CW5 sing 109 n n C24 H6 CW5 sing 110 n n C24 H7 CW5 sing 111 n n C28 H8 CW5 sing 112 n n C28 H9 CW5 sing 113 n n C28 H10 CW5 sing 114 n n C29 H11 CW5 sing 115 n n C29 H12 CW5 sing 116 n n C30 H13 CW5 sing 117 n n C30 H14 CW5 sing 118 n n C6 H15 CW5 sing 119 n n N11 H16 CW5 sing 120 n n N25 H17 CW5 sing 121 n n C31 H18 CW5 sing 122 n n C31 H19 CW5 sing 123 n n C32 H20 CW5 sing 124 n n C32 H21 CW5 sing 125 n n # _atom_sites.entry_id 6F7I _atom_sites.fract_transf_matrix[1][1] 0.015576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006227 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CW5 A 1 801 1 CW5 LI1 . D 3 MG A 1 802 1 MG MG . E 3 MG A 1 803 2 MG MG . F 4 GOL A 1 804 3 GOL GOL . G 2 CW5 B 1 801 1 CW5 LI1 . H 4 GOL B 1 802 4 GOL GOL . I 5 HOH A 1 901 129 HOH HOH . I 5 HOH A 2 902 156 HOH HOH . I 5 HOH A 3 903 181 HOH HOH . I 5 HOH A 4 904 110 HOH HOH . I 5 HOH A 5 905 108 HOH HOH . I 5 HOH A 6 906 120 HOH HOH . I 5 HOH A 7 907 13 HOH HOH . I 5 HOH A 8 908 136 HOH HOH . I 5 HOH A 9 909 47 HOH HOH . I 5 HOH A 10 910 111 HOH HOH . I 5 HOH A 11 911 182 HOH HOH . I 5 HOH A 12 912 43 HOH HOH . I 5 HOH A 13 913 179 HOH HOH . I 5 HOH A 14 914 180 HOH HOH . I 5 HOH A 15 915 54 HOH HOH . I 5 HOH A 16 916 123 HOH HOH . I 5 HOH A 17 917 106 HOH HOH . I 5 HOH A 18 918 81 HOH HOH . I 5 HOH A 19 919 48 HOH HOH . I 5 HOH A 20 920 126 HOH HOH . I 5 HOH A 21 921 40 HOH HOH . I 5 HOH A 22 922 53 HOH HOH . I 5 HOH A 23 923 174 HOH HOH . I 5 HOH A 24 924 161 HOH HOH . I 5 HOH A 25 925 183 HOH HOH . I 5 HOH A 26 926 2 HOH HOH . I 5 HOH A 27 927 38 HOH HOH . I 5 HOH A 28 928 184 HOH HOH . I 5 HOH A 29 929 94 HOH HOH . I 5 HOH A 30 930 121 HOH HOH . I 5 HOH A 31 931 107 HOH HOH . I 5 HOH A 32 932 118 HOH HOH . I 5 HOH A 33 933 186 HOH HOH . I 5 HOH A 34 934 155 HOH HOH . I 5 HOH A 35 935 163 HOH HOH . I 5 HOH A 36 936 149 HOH HOH . I 5 HOH A 37 937 132 HOH HOH . I 5 HOH A 38 938 133 HOH HOH . I 5 HOH A 39 939 125 HOH HOH . I 5 HOH A 40 940 114 HOH HOH . I 5 HOH A 41 941 173 HOH HOH . I 5 HOH A 42 942 135 HOH HOH . I 5 HOH A 43 943 21 HOH HOH . I 5 HOH A 44 944 49 HOH HOH . I 5 HOH A 45 945 172 HOH HOH . I 5 HOH A 46 946 119 HOH HOH . J 5 HOH B 1 901 25 HOH HOH . J 5 HOH B 2 902 160 HOH HOH . J 5 HOH B 3 903 185 HOH HOH . J 5 HOH B 4 904 116 HOH HOH . J 5 HOH B 5 905 66 HOH HOH . J 5 HOH B 6 906 19 HOH HOH . J 5 HOH B 7 907 105 HOH HOH . J 5 HOH B 8 908 139 HOH HOH . J 5 HOH B 9 909 112 HOH HOH . J 5 HOH B 10 910 12 HOH HOH . J 5 HOH B 11 911 146 HOH HOH . J 5 HOH B 12 912 8 HOH HOH . J 5 HOH B 13 913 177 HOH HOH . J 5 HOH B 14 914 166 HOH HOH . J 5 HOH B 15 915 131 HOH HOH . J 5 HOH B 16 916 162 HOH HOH . J 5 HOH B 17 917 159 HOH HOH . J 5 HOH B 18 918 145 HOH HOH . J 5 HOH B 19 919 153 HOH HOH . J 5 HOH B 20 920 124 HOH HOH . J 5 HOH B 21 921 154 HOH HOH . J 5 HOH B 22 922 190 HOH HOH . J 5 HOH B 23 923 137 HOH HOH . J 5 HOH B 24 924 140 HOH HOH . J 5 HOH B 25 925 138 HOH HOH . J 5 HOH B 26 926 14 HOH HOH . J 5 HOH B 27 927 130 HOH HOH . J 5 HOH B 28 928 85 HOH HOH . J 5 HOH B 29 929 144 HOH HOH . J 5 HOH B 30 930 46 HOH HOH . J 5 HOH B 31 931 113 HOH HOH . J 5 HOH B 32 932 83 HOH HOH . J 5 HOH B 33 933 151 HOH HOH . J 5 HOH B 34 934 3 HOH HOH . J 5 HOH B 35 935 143 HOH HOH . J 5 HOH B 36 936 178 HOH HOH . J 5 HOH B 37 937 189 HOH HOH . J 5 HOH B 38 938 164 HOH HOH . J 5 HOH B 39 939 147 HOH HOH . J 5 HOH B 40 940 188 HOH HOH . J 5 HOH B 41 941 148 HOH HOH . J 5 HOH B 42 942 152 HOH HOH . J 5 HOH B 43 943 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CW5 . . . C 2 7.306 -3.958 22.529 1 43.67 ? C1 CW5 801 A 1 HETATM 2 C C2 CW5 . . . C 2 6.177 -3.154 22.812 1 42.83 ? C2 CW5 801 A 1 HETATM 3 C C3 CW5 . . . C 2 4.957 -3.468 22.199 1 45.26 ? C3 CW5 801 A 1 HETATM 4 C C12 CW5 . . . C 2 11.075 -2.153 25.058 1 43.57 ? C12 CW5 801 A 1 HETATM 5 C C13 CW5 . . . C 2 12.205 -1.473 24.669 1 46.12 ? C13 CW5 801 A 1 HETATM 6 C C15 CW5 . . . C 2 10.522 -1.916 26.433 1 43.29 ? C15 CW5 801 A 1 HETATM 7 C C16 CW5 . . . C 2 12.295 -0.433 26.741 1 44.63 ? C16 CW5 801 A 1 HETATM 8 C C19 CW5 . . . C 2 14.015 0.848 26.456 1 47.98 ? C19 CW5 801 A 1 HETATM 9 C C20 CW5 . . . C 2 12.988 0.471 27.437 1 45.79 ? C20 CW5 801 A 1 HETATM 10 C C22 CW5 . . . C 2 12.902 -1.576 23.281 1 44.08 ? C22 CW5 801 A 1 HETATM 11 C C24 CW5 . . . C 2 12.06 -0.88 22.164 1 38.81 ? C24 CW5 801 A 1 HETATM 12 C C26 CW5 . . . C 2 9.058 -2.858 23.905 1 44.03 ? C26 CW5 801 A 1 HETATM 13 C C28 CW5 . . . C 2 13.928 -3.799 23.647 1 41.87 ? C28 CW5 801 A 1 HETATM 14 C C29 CW5 . . . C 2 2.51 -4.923 18.37 1 51.14 ? C29 CW5 801 A 1 HETATM 15 C C30 CW5 . . . C 2 3.24 -4.883 16.996 1 50.44 ? C30 CW5 801 A 1 HETATM 16 C C4 CW5 . . . C 2 4.893 -4.582 21.343 1 48.01 ? C4 CW5 801 A 1 HETATM 17 N N5 CW5 . . . C 2 6.001 -5.304 21.081 1 49.2 ? N5 CW5 801 A 1 HETATM 18 C C6 CW5 . . . C 2 7.196 -5.03 21.633 1 46.16 ? C6 CW5 801 A 1 HETATM 19 CL CL7 CW5 . . . C 2 3.539 -2.497 22.491 1 48.34 ? CL7 CW5 801 A 1 HETATM 20 C C8 CW5 . . . C 2 3.689 -4.943 20.524 1 50.09 ? C8 CW5 801 A 1 HETATM 21 O O9 CW5 . . . C 2 2.832 -5.655 21.042 1 52.17 ? O9 CW5 801 A 1 HETATM 22 N N10 CW5 . . . C 2 3.625 -4.521 19.227 1 50.94 ? N10 CW5 801 A 1 HETATM 23 N N11 CW5 . . . C 2 8.599 -3.807 23.075 1 42.58 ? N11 CW5 801 A 1 HETATM 24 N N14 CW5 . . . C 2 11.114 -1.103 27.199 1 43.41 ? N14 CW5 801 A 1 HETATM 25 N N17 CW5 . . . C 2 12.783 -0.654 25.536 1 45.51 ? N17 CW5 801 A 1 HETATM 26 N N18 CW5 . . . C 2 13.858 0.153 25.415 1 47.65 ? N18 CW5 801 A 1 HETATM 27 CL CL2 CW5 . . . C 2 15.314 1.954 26.733 1 49.7 ? CL2 CW5 801 A 1 HETATM 28 O O23 CW5 . . . C 2 13.092 -2.95 22.83 1 44.14 ? O23 CW5 801 A 1 HETATM 29 N N25 CW5 . . . C 2 10.378 -2.946 24.207 1 40.81 ? N25 CW5 801 A 1 HETATM 30 O O27 CW5 . . . C 2 8.313 -1.996 24.359 1 46.14 ? O27 CW5 801 A 1 HETATM 31 C C31 CW5 . . . C 2 4.158 -3.639 17.102 1 49.63 ? C31 CW5 801 A 1 HETATM 32 C C32 CW5 . . . C 2 4.647 -3.688 18.578 1 50.83 ? C32 CW5 801 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #