data_6F7I # _model_server_result.job_id Qky1qNs0lk9fPfSsvS_cHg _model_server_result.datetime_utc '2024-11-08 11:44:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":802}' # _entry.id 6F7I # _exptl.entry_id 6F7I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.79 _cell.angle_gamma 90 _cell.entry_id 6F7I _cell.length_a 64.2 _cell.length_b 108.97 _cell.length_c 73.51 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 328 A GLU 652 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc2 A OE2 GLU 329 A GLU 653 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 185 n n C1 C2 GOL sing 186 n n C1 H11 GOL sing 187 n n C1 H12 GOL sing 188 n n O1 HO1 GOL sing 189 n n C2 O2 GOL sing 190 n n C2 C3 GOL sing 191 n n C2 H2 GOL sing 192 n n O2 HO2 GOL sing 193 n n C3 O3 GOL sing 194 n n C3 H31 GOL sing 195 n n C3 H32 GOL sing 196 n n O3 HO3 GOL sing 197 n n # _atom_sites.entry_id 6F7I _atom_sites.fract_transf_matrix[1][1] 0.015576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006227 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CW5 A 1 801 1 CW5 LI1 . D 3 MG A 1 802 1 MG MG . E 3 MG A 1 803 2 MG MG . F 4 GOL A 1 804 3 GOL GOL . G 2 CW5 B 1 801 1 CW5 LI1 . H 4 GOL B 1 802 4 GOL GOL . I 5 HOH A 1 901 129 HOH HOH . I 5 HOH A 2 902 156 HOH HOH . I 5 HOH A 3 903 181 HOH HOH . I 5 HOH A 4 904 110 HOH HOH . I 5 HOH A 5 905 108 HOH HOH . I 5 HOH A 6 906 120 HOH HOH . I 5 HOH A 7 907 13 HOH HOH . I 5 HOH A 8 908 136 HOH HOH . I 5 HOH A 9 909 47 HOH HOH . I 5 HOH A 10 910 111 HOH HOH . I 5 HOH A 11 911 182 HOH HOH . I 5 HOH A 12 912 43 HOH HOH . I 5 HOH A 13 913 179 HOH HOH . I 5 HOH A 14 914 180 HOH HOH . I 5 HOH A 15 915 54 HOH HOH . I 5 HOH A 16 916 123 HOH HOH . I 5 HOH A 17 917 106 HOH HOH . I 5 HOH A 18 918 81 HOH HOH . I 5 HOH A 19 919 48 HOH HOH . I 5 HOH A 20 920 126 HOH HOH . I 5 HOH A 21 921 40 HOH HOH . I 5 HOH A 22 922 53 HOH HOH . I 5 HOH A 23 923 174 HOH HOH . I 5 HOH A 24 924 161 HOH HOH . I 5 HOH A 25 925 183 HOH HOH . I 5 HOH A 26 926 2 HOH HOH . I 5 HOH A 27 927 38 HOH HOH . I 5 HOH A 28 928 184 HOH HOH . I 5 HOH A 29 929 94 HOH HOH . I 5 HOH A 30 930 121 HOH HOH . I 5 HOH A 31 931 107 HOH HOH . I 5 HOH A 32 932 118 HOH HOH . I 5 HOH A 33 933 186 HOH HOH . I 5 HOH A 34 934 155 HOH HOH . I 5 HOH A 35 935 163 HOH HOH . I 5 HOH A 36 936 149 HOH HOH . I 5 HOH A 37 937 132 HOH HOH . I 5 HOH A 38 938 133 HOH HOH . I 5 HOH A 39 939 125 HOH HOH . I 5 HOH A 40 940 114 HOH HOH . I 5 HOH A 41 941 173 HOH HOH . I 5 HOH A 42 942 135 HOH HOH . I 5 HOH A 43 943 21 HOH HOH . I 5 HOH A 44 944 49 HOH HOH . I 5 HOH A 45 945 172 HOH HOH . I 5 HOH A 46 946 119 HOH HOH . J 5 HOH B 1 901 25 HOH HOH . J 5 HOH B 2 902 160 HOH HOH . J 5 HOH B 3 903 185 HOH HOH . J 5 HOH B 4 904 116 HOH HOH . J 5 HOH B 5 905 66 HOH HOH . J 5 HOH B 6 906 19 HOH HOH . J 5 HOH B 7 907 105 HOH HOH . J 5 HOH B 8 908 139 HOH HOH . J 5 HOH B 9 909 112 HOH HOH . J 5 HOH B 10 910 12 HOH HOH . J 5 HOH B 11 911 146 HOH HOH . J 5 HOH B 12 912 8 HOH HOH . J 5 HOH B 13 913 177 HOH HOH . J 5 HOH B 14 914 166 HOH HOH . J 5 HOH B 15 915 131 HOH HOH . J 5 HOH B 16 916 162 HOH HOH . J 5 HOH B 17 917 159 HOH HOH . J 5 HOH B 18 918 145 HOH HOH . J 5 HOH B 19 919 153 HOH HOH . J 5 HOH B 20 920 124 HOH HOH . J 5 HOH B 21 921 154 HOH HOH . J 5 HOH B 22 922 190 HOH HOH . J 5 HOH B 23 923 137 HOH HOH . J 5 HOH B 24 924 140 HOH HOH . J 5 HOH B 25 925 138 HOH HOH . J 5 HOH B 26 926 14 HOH HOH . J 5 HOH B 27 927 130 HOH HOH . J 5 HOH B 28 928 85 HOH HOH . J 5 HOH B 29 929 144 HOH HOH . J 5 HOH B 30 930 46 HOH HOH . J 5 HOH B 31 931 113 HOH HOH . J 5 HOH B 32 932 83 HOH HOH . J 5 HOH B 33 933 151 HOH HOH . J 5 HOH B 34 934 3 HOH HOH . J 5 HOH B 35 935 143 HOH HOH . J 5 HOH B 36 936 178 HOH HOH . J 5 HOH B 37 937 189 HOH HOH . J 5 HOH B 38 938 164 HOH HOH . J 5 HOH B 39 939 147 HOH HOH . J 5 HOH B 40 940 188 HOH HOH . J 5 HOH B 41 941 148 HOH HOH . J 5 HOH B 42 942 152 HOH HOH . J 5 HOH B 43 943 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 -1.384 -16.899 65.284 1 82.13 ? C1 GOL 802 B 1 HETATM 2 O O1 GOL . . . H 4 -2.648 -17.466 65.611 1 84.18 ? O1 GOL 802 B 1 HETATM 3 C C2 GOL . . . H 4 -1.449 -16.215 63.94 1 82.56 ? C2 GOL 802 B 1 HETATM 4 O O2 GOL . . . H 4 -1.832 -14.849 64.121 1 83.65 ? O2 GOL 802 B 1 HETATM 5 C C3 GOL . . . H 4 -0.127 -16.3 63.211 1 80.85 ? C3 GOL 802 B 1 HETATM 6 O O3 GOL . . . H 4 -0.231 -15.757 61.903 1 78.81 ? O3 GOL 802 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #