data_6F7Q # _model_server_result.job_id -mLgLfO7mR6UDGcQzzHQsQ _model_server_result.datetime_utc '2024-11-24 01:11:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6f7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":621}' # _entry.id 6F7Q # _exptl.entry_id 6F7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6F7Q _cell.length_a 152.14 _cell.length_b 152.14 _cell.length_c 141.91 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6F7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 S N N ? 10 T N N ? 10 U N N ? 10 BA N N ? 10 CA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 FUL NAG C1 O1 . O6 HO6 . sing 2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 1 FUL NAG C1 O1 . O6 HO6 . sing 4 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 5 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 6 ? 5 3 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG G 602 NAG 2 n C FUL 2 C 2 FUL G 603 FUL 3 n D NAG 1 D 1 NAG G 621 NAG 3 n D NAG 2 D 2 NAG G 623 NAG 3 n D FUL 3 D 3 FUL G 622 FUL 3 n E NAG 1 E 1 NAG G 641 NAG 3 n E NAG 2 E 2 NAG G 643 NAG 3 n E FUL 3 E 3 FUL G 642 FUL 4 n F NAG 1 F 1 NAG H 604 NAG 4 n F NAG 2 F 2 NAG H 605 NAG 5 n G NAG 1 G 1 NAG H 608 NAG 5 n G NAG 2 G 2 NAG H 609 NAG 5 n G FUC 3 G 3 FUC H 610 FUC 3 n H NAG 1 H 1 NAG H 621 NAG 3 n H NAG 2 H 2 NAG H 623 NAG 3 n H FUL 3 H 3 FUL H 622 FUL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 65 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 252 A CYS 252 1_555 A SG CYS 263 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 400 A CYS 400 1_555 A SG CYS 519 A CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 65 B CYS 65 1_555 B SG CYS 92 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 B SG CYS 252 B CYS 252 1_555 B SG CYS 263 B CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 B SG CYS 400 B CYS 400 1_555 B SG CYS 519 B CYS 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? covale ? covale1 A ND2 ASN 57 A ASN 57 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale2 A ND2 ASN 106 A ASN 106 1_555 Q C1 NAG . A NAG 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.485 ? covale ? covale3 A ND2 ASN 241 A ASN 241 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.473 ? covale ? covale4 A ND2 ASN 341 A ASN 341 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.247 ? covale ? covale5 A ND2 ASN 341 A ASN 341 1_555 E O5 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale6 A ND2 ASN 485 A ASN 485 1_555 R C1 NAG . A NAG 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.5 ? covale ? covale7 B ND2 ASN 57 B ASN 57 1_555 Z C1 NAG . B NAG 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 sing covale ? covale8 B ND2 ASN 106 B ASN 106 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.501 ? covale ? covale9 B ND2 ASN 241 B ASN 241 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale10 B ND2 ASN 341 B ASN 341 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.415 ? covale ? covale11 B ND2 ASN 485 B ASN 485 1_555 AA C1 NAG . B NAG 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.516 ? covale ? covale12 C O6 NAG . C NAG 1 1_555 C C1 FUL . C FUL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.369 ? covale ? covale13 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale14 D O6 NAG . D NAG 1 1_555 D C1 FUL . D FUL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale15 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale16 E O6 NAG . E NAG 1 1_555 E C1 FUL . E FUL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale17 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.413 ? covale ? covale18 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.477 ? covale ? covale19 G O6 NAG . G NAG 1 1_555 G C1 FUC . G FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale20 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale21 H O6 NAG . H NAG 1 1_555 H C1 FUL . H FUL 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 464 n n S O2 SO4 doub 465 n n S O3 SO4 sing 466 n n S O4 SO4 sing 467 n n # _atom_sites.entry_id 6F7Q _atom_sites.fract_transf_matrix[1][1] 0.006573 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006573 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 6 CWQ A 1 601 1 CWQ DRG . J 6 CWQ A 1 602 2 CWQ DRG . K 7 GOL A 1 603 1 GOL GOL . L 7 GOL A 1 604 2 GOL GOL . M 7 GOL A 1 605 3 GOL GOL . N 8 EDO A 1 606 1 EDO EDO . O 8 EDO A 1 607 2 EDO EDO . P 8 EDO A 1 608 4 EDO EDO . Q 9 NAG A 1 611 604 NAG NAG . R 9 NAG A 1 615 611 NAG NAG . S 10 SO4 A 1 619 2 SO4 SO4 . T 10 SO4 A 1 620 3 SO4 SO4 . U 10 SO4 A 1 621 5 SO4 SO4 . V 6 CWQ B 1 601 3 CWQ DRG . W 6 CWQ B 1 602 4 CWQ DRG . X 11 CL B 1 603 2 CL CL . Y 8 EDO B 1 604 3 EDO EDO . Z 9 NAG B 1 605 601 NAG NAG . AA 9 NAG B 1 611 613 NAG NAG . BA 10 SO4 B 1 615 1 SO4 SO4 . CA 10 SO4 B 1 616 4 SO4 SO4 . DA 12 HOH A 1 701 81 HOH HOH . DA 12 HOH A 2 702 124 HOH HOH . DA 12 HOH A 3 703 147 HOH HOH . DA 12 HOH A 4 704 52 HOH HOH . DA 12 HOH A 5 705 77 HOH HOH . DA 12 HOH A 6 706 160 HOH HOH . DA 12 HOH A 7 707 64 HOH HOH . DA 12 HOH A 8 708 82 HOH HOH . DA 12 HOH A 9 709 139 HOH HOH . DA 12 HOH A 10 710 76 HOH HOH . DA 12 HOH A 11 711 16 HOH HOH . DA 12 HOH A 12 712 145 HOH HOH . DA 12 HOH A 13 713 24 HOH HOH . DA 12 HOH A 14 714 25 HOH HOH . DA 12 HOH A 15 715 130 HOH HOH . DA 12 HOH A 16 716 132 HOH HOH . DA 12 HOH A 17 717 35 HOH HOH . DA 12 HOH A 18 718 20 HOH HOH . DA 12 HOH A 19 719 152 HOH HOH . DA 12 HOH A 20 720 150 HOH HOH . DA 12 HOH A 21 721 51 HOH HOH . DA 12 HOH A 22 722 148 HOH HOH . DA 12 HOH A 23 723 144 HOH HOH . DA 12 HOH A 24 724 170 HOH HOH . DA 12 HOH A 25 725 50 HOH HOH . DA 12 HOH A 26 726 133 HOH HOH . DA 12 HOH A 27 727 142 HOH HOH . DA 12 HOH A 28 728 80 HOH HOH . DA 12 HOH A 29 729 32 HOH HOH . DA 12 HOH A 30 730 13 HOH HOH . DA 12 HOH A 31 731 153 HOH HOH . DA 12 HOH A 32 732 69 HOH HOH . DA 12 HOH A 33 733 105 HOH HOH . DA 12 HOH A 34 734 119 HOH HOH . DA 12 HOH A 35 735 102 HOH HOH . DA 12 HOH A 36 736 123 HOH HOH . DA 12 HOH A 37 737 61 HOH HOH . DA 12 HOH A 38 738 44 HOH HOH . DA 12 HOH A 39 739 110 HOH HOH . DA 12 HOH A 40 740 33 HOH HOH . DA 12 HOH A 41 741 129 HOH HOH . DA 12 HOH A 42 742 108 HOH HOH . DA 12 HOH A 43 743 74 HOH HOH . DA 12 HOH A 44 744 17 HOH HOH . DA 12 HOH A 45 745 58 HOH HOH . DA 12 HOH A 46 746 164 HOH HOH . DA 12 HOH A 47 747 95 HOH HOH . DA 12 HOH A 48 748 75 HOH HOH . DA 12 HOH A 49 749 67 HOH HOH . DA 12 HOH A 50 750 59 HOH HOH . DA 12 HOH A 51 751 149 HOH HOH . DA 12 HOH A 52 752 28 HOH HOH . DA 12 HOH A 53 753 146 HOH HOH . DA 12 HOH A 54 754 53 HOH HOH . DA 12 HOH A 55 755 107 HOH HOH . DA 12 HOH A 56 756 26 HOH HOH . DA 12 HOH A 57 757 151 HOH HOH . DA 12 HOH A 58 758 54 HOH HOH . DA 12 HOH A 59 759 131 HOH HOH . DA 12 HOH A 60 760 115 HOH HOH . DA 12 HOH A 61 761 30 HOH HOH . DA 12 HOH A 62 762 158 HOH HOH . DA 12 HOH A 63 763 161 HOH HOH . DA 12 HOH A 64 764 169 HOH HOH . DA 12 HOH A 65 765 104 HOH HOH . DA 12 HOH A 66 766 85 HOH HOH . DA 12 HOH A 67 767 162 HOH HOH . DA 12 HOH A 68 768 21 HOH HOH . DA 12 HOH A 69 769 101 HOH HOH . DA 12 HOH A 70 770 18 HOH HOH . DA 12 HOH A 71 771 121 HOH HOH . DA 12 HOH A 72 772 159 HOH HOH . DA 12 HOH A 73 773 71 HOH HOH . DA 12 HOH A 74 774 128 HOH HOH . DA 12 HOH A 75 775 109 HOH HOH . DA 12 HOH A 76 776 127 HOH HOH . DA 12 HOH A 77 777 163 HOH HOH . DA 12 HOH A 78 778 62 HOH HOH . DA 12 HOH A 79 779 126 HOH HOH . DA 12 HOH A 80 780 68 HOH HOH . DA 12 HOH A 81 781 83 HOH HOH . DA 12 HOH A 82 782 171 HOH HOH . DA 12 HOH A 83 783 156 HOH HOH . DA 12 HOH A 84 784 143 HOH HOH . DA 12 HOH A 85 785 157 HOH HOH . DA 12 HOH A 86 786 49 HOH HOH . DA 12 HOH A 87 787 172 HOH HOH . EA 12 HOH B 1 701 111 HOH HOH . EA 12 HOH B 2 702 167 HOH HOH . EA 12 HOH B 3 703 165 HOH HOH . EA 12 HOH B 4 704 66 HOH HOH . EA 12 HOH B 5 705 166 HOH HOH . EA 12 HOH B 6 706 46 HOH HOH . EA 12 HOH B 7 707 7 HOH HOH . EA 12 HOH B 8 708 118 HOH HOH . EA 12 HOH B 9 709 29 HOH HOH . EA 12 HOH B 10 710 125 HOH HOH . EA 12 HOH B 11 711 19 HOH HOH . EA 12 HOH B 12 712 60 HOH HOH . EA 12 HOH B 13 713 99 HOH HOH . EA 12 HOH B 14 714 38 HOH HOH . EA 12 HOH B 15 715 155 HOH HOH . EA 12 HOH B 16 716 23 HOH HOH . EA 12 HOH B 17 717 79 HOH HOH . EA 12 HOH B 18 718 37 HOH HOH . EA 12 HOH B 19 719 84 HOH HOH . EA 12 HOH B 20 720 120 HOH HOH . EA 12 HOH B 21 721 9 HOH HOH . EA 12 HOH B 22 722 78 HOH HOH . EA 12 HOH B 23 723 70 HOH HOH . EA 12 HOH B 24 724 57 HOH HOH . EA 12 HOH B 25 725 116 HOH HOH . EA 12 HOH B 26 726 63 HOH HOH . EA 12 HOH B 27 727 40 HOH HOH . EA 12 HOH B 28 728 31 HOH HOH . EA 12 HOH B 29 729 168 HOH HOH . EA 12 HOH B 30 730 136 HOH HOH . EA 12 HOH B 31 731 114 HOH HOH . EA 12 HOH B 32 732 138 HOH HOH . EA 12 HOH B 33 733 113 HOH HOH . EA 12 HOH B 34 734 41 HOH HOH . EA 12 HOH B 35 735 137 HOH HOH . EA 12 HOH B 36 736 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . U 10 -33.543 -1.223 8.252 0.7 106.44 ? S SO4 621 A 1 HETATM 2 O O1 SO4 . . . U 10 -32.909 -0.078 7.641 0.7 89.86 ? O1 SO4 621 A 1 HETATM 3 O O2 SO4 . . . U 10 -34.624 -1.707 7.373 0.7 74.38 ? O2 SO4 621 A 1 HETATM 4 O O3 SO4 . . . U 10 -34.048 -0.779 9.54 0.7 87.95 ? O3 SO4 621 A 1 HETATM 5 O O4 SO4 . . . U 10 -32.517 -2.242 8.482 0.7 80.07 ? O4 SO4 621 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #