data_6FC4 # _model_server_result.job_id ktqZ7LKmIuC2D88s9408Bg _model_server_result.datetime_utc '2024-11-17 02:02:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fc4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 6FC4 # _exptl.entry_id 6FC4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FC4 _cell.length_a 163.488 _cell.length_b 163.488 _cell.length_c 56.035 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FC4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 130 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 135 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 163 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.023 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6FC4 _atom_sites.fract_transf_matrix[1][1] 0.006117 _atom_sites.fract_transf_matrix[1][2] 0.003531 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017846 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 701 1 GOL GOL . C 3 HOH A 1 801 52 HOH HOH . C 3 HOH A 2 802 28 HOH HOH . C 3 HOH A 3 803 56 HOH HOH . C 3 HOH A 4 804 61 HOH HOH . C 3 HOH A 5 805 25 HOH HOH . C 3 HOH A 6 806 34 HOH HOH . C 3 HOH A 7 807 3 HOH HOH . C 3 HOH A 8 808 51 HOH HOH . C 3 HOH A 9 809 62 HOH HOH . C 3 HOH A 10 810 67 HOH HOH . C 3 HOH A 11 811 77 HOH HOH . C 3 HOH A 12 812 72 HOH HOH . C 3 HOH A 13 813 50 HOH HOH . C 3 HOH A 14 814 23 HOH HOH . C 3 HOH A 15 815 10 HOH HOH . C 3 HOH A 16 816 60 HOH HOH . C 3 HOH A 17 817 8 HOH HOH . C 3 HOH A 18 818 58 HOH HOH . C 3 HOH A 19 819 47 HOH HOH . C 3 HOH A 20 820 26 HOH HOH . C 3 HOH A 21 821 37 HOH HOH . C 3 HOH A 22 822 33 HOH HOH . C 3 HOH A 23 823 14 HOH HOH . C 3 HOH A 24 824 17 HOH HOH . C 3 HOH A 25 825 63 HOH HOH . C 3 HOH A 26 826 4 HOH HOH . C 3 HOH A 27 827 30 HOH HOH . C 3 HOH A 28 828 76 HOH HOH . C 3 HOH A 29 829 49 HOH HOH . C 3 HOH A 30 830 70 HOH HOH . C 3 HOH A 31 831 57 HOH HOH . C 3 HOH A 32 832 18 HOH HOH . C 3 HOH A 33 833 12 HOH HOH . C 3 HOH A 34 834 32 HOH HOH . C 3 HOH A 35 835 42 HOH HOH . C 3 HOH A 36 836 41 HOH HOH . C 3 HOH A 37 837 9 HOH HOH . C 3 HOH A 38 838 71 HOH HOH . C 3 HOH A 39 839 7 HOH HOH . C 3 HOH A 40 840 68 HOH HOH . C 3 HOH A 41 841 64 HOH HOH . C 3 HOH A 42 842 21 HOH HOH . C 3 HOH A 43 843 20 HOH HOH . C 3 HOH A 44 844 11 HOH HOH . C 3 HOH A 45 845 35 HOH HOH . C 3 HOH A 46 846 6 HOH HOH . C 3 HOH A 47 847 43 HOH HOH . C 3 HOH A 48 848 45 HOH HOH . C 3 HOH A 49 849 15 HOH HOH . C 3 HOH A 50 850 40 HOH HOH . C 3 HOH A 51 851 16 HOH HOH . C 3 HOH A 52 852 46 HOH HOH . C 3 HOH A 53 853 2 HOH HOH . C 3 HOH A 54 854 24 HOH HOH . C 3 HOH A 55 855 38 HOH HOH . C 3 HOH A 56 856 36 HOH HOH . C 3 HOH A 57 857 65 HOH HOH . C 3 HOH A 58 858 27 HOH HOH . C 3 HOH A 59 859 39 HOH HOH . C 3 HOH A 60 860 48 HOH HOH . C 3 HOH A 61 861 13 HOH HOH . C 3 HOH A 62 862 29 HOH HOH . C 3 HOH A 63 863 69 HOH HOH . C 3 HOH A 64 864 19 HOH HOH . C 3 HOH A 65 865 22 HOH HOH . C 3 HOH A 66 866 59 HOH HOH . C 3 HOH A 67 867 73 HOH HOH . C 3 HOH A 68 868 44 HOH HOH . C 3 HOH A 69 869 66 HOH HOH . C 3 HOH A 70 870 75 HOH HOH . C 3 HOH A 71 871 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -68.609 -46.272 15.541 1 73.7 ? C1 GOL 701 A 1 HETATM 2 O O1 GOL . . . B 2 -67.665 -46.496 14.48 1 70.88 ? O1 GOL 701 A 1 HETATM 3 C C2 GOL . . . B 2 -67.98 -46.303 16.939 1 73.08 ? C2 GOL 701 A 1 HETATM 4 O O2 GOL . . . B 2 -67.058 -45.198 17.057 1 74.59 ? O2 GOL 701 A 1 HETATM 5 C C3 GOL . . . B 2 -69.077 -46.157 18.001 1 69.12 ? C3 GOL 701 A 1 HETATM 6 O O3 GOL . . . B 2 -68.587 -46.184 19.346 1 71.43 ? O3 GOL 701 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #