data_6FCB # _model_server_result.job_id NVjX9XFTjjEvkqbkZWdTgA _model_server_result.datetime_utc '2024-11-26 21:08:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fcb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6FCB # _exptl.entry_id 6FCB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FCB _cell.length_a 66.33 _cell.length_b 94.87 _cell.length_c 117.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 31 A ASP 31 1_555 C MG MG . A MG 402 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.314 ? metalc ? metalc2 A OD2 ASP 31 A ASP 31 1_555 C MG MG . A MG 402 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.157 ? metalc ? metalc3 A OE2 GLU 57 A GLU 57 1_555 E K K . A K 404 2_555 ? ? ? ? A ? ? ? ? ? ? ? 2.754 ? metalc ? metalc4 A OD1 ASP 258 A ASP 258 1_555 E K K . A K 404 1_555 ? ? ? ? A ? ? ? ? ? ? ? 3.036 ? metalc ? metalc5 A OD2 ASP 258 A ASP 258 1_555 E K K . A K 404 1_555 ? ? ? ? A ? ? ? ? ? ? ? 3.349 ? metalc ? metalc6 A O ALA 259 A ALA 259 1_555 E K K . A K 404 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.614 ? metalc ? metalc7 A OD2 ASP 291 A ASP 291 1_555 D MG MG . A MG 403 2_555 ? ? ? ? A ? ? ? ? ? ? ? 2.693 ? metalc ? metalc8 B O2G PPK . A PPK 401 1_555 C MG MG . A MG 402 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.563 ? metalc ? metalc9 B O1B PPK . A PPK 401 1_555 C MG MG . A MG 402 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.485 ? metalc ? metalc10 B O3G PPK . A PPK 401 1_555 D MG MG . A MG 403 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.363 ? metalc ? metalc11 B O4A PPK . A PPK 401 1_555 D MG MG . A MG 403 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.226 ? metalc ? metalc12 B O1B PPK . A PPK 401 1_555 E K K . A K 404 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.821 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6FCB _atom_sites.fract_transf_matrix[1][1] 0.015076 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010541 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00852 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PPK A 1 401 400 PPK PPK . C 3 MG A 1 402 401 MG MG . D 3 MG A 1 403 402 MG MG . E 4 K A 1 404 403 K K . F 5 SAM A 1 405 405 SAM SAM . G 6 PEG A 1 406 412 PEG PEG . H 7 HOH A 1 501 418 HOH HOH . H 7 HOH A 2 502 417 HOH HOH . H 7 HOH A 3 503 419 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id A _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.374 _atom_site.Cartn_y -7.397 _atom_site.Cartn_z -23.552 _atom_site.occupancy 0.75 _atom_site.B_iso_or_equiv 27.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #