data_6FD0 # _model_server_result.job_id Nq2eWgJIhP6kfXc1AwDmcQ _model_server_result.datetime_utc '2024-12-02 00:10:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fd0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 6FD0 # _exptl.entry_id 6FD0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 62.708 _cell.angle_beta 72.07 _cell.angle_gamma 83.709 _cell.entry_id 6FD0 _cell.length_a 34.24 _cell.length_b 49.049 _cell.length_c 49.549 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FD0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 60 A CYS 705 1_555 A SG CYS 66 A CYS 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 104 A CYS 749 1_555 A SG CYS 114 A CYS 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 A SG CYS 126 A CYS 771 1_555 B SG CYS 126 B CYS 771 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 126 A CYS 771 1_555 B SG CYS 126 B CYS 771 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 B SG CYS 60 B CYS 705 1_555 B SG CYS 66 B CYS 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 104 B CYS 749 1_555 B SG CYS 114 B CYS 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 250 n n C1 C2 PEG sing 251 n n C1 H11 PEG sing 252 n n C1 H12 PEG sing 253 n n O1 HO1 PEG sing 254 n n C2 O2 PEG sing 255 n n C2 H21 PEG sing 256 n n C2 H22 PEG sing 257 n n O2 C3 PEG sing 258 n n C3 C4 PEG sing 259 n n C3 H31 PEG sing 260 n n C3 H32 PEG sing 261 n n C4 O4 PEG sing 262 n n C4 H41 PEG sing 263 n n C4 H42 PEG sing 264 n n O4 HO4 PEG sing 265 n n # _atom_sites.entry_id 6FD0 _atom_sites.fract_transf_matrix[1][1] 0.029206 _atom_sites.fract_transf_matrix[1][2] -0.00322 _atom_sites.fract_transf_matrix[1][3] -0.008958 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020511 _atom_sites.fract_transf_matrix[2][3] -0.010312 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 801 1 PEG PEG . D 3 GOL A 1 802 3 GOL GOL . E 3 GOL B 1 801 1 GOL GOL . F 3 GOL B 1 802 4 GOL GOL . G 4 HOH A 1 901 1 HOH HOH . H 4 HOH B 1 901 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 2 -10.447 2.396 -6.407 1 57.55 ? C1 PEG 801 A 1 HETATM 2 O O1 PEG . . . C 2 -10.827 1.459 -5.436 1 43.25 ? O1 PEG 801 A 1 HETATM 3 C C2 PEG . . . C 2 -9.116 1.994 -7.043 1 74.2 ? C2 PEG 801 A 1 HETATM 4 O O2 PEG . . . C 2 -9.247 0.776 -7.733 1 74.63 ? O2 PEG 801 A 1 HETATM 5 C C3 PEG . . . C 2 -8.179 0.505 -8.607 1 67.1 ? C3 PEG 801 A 1 HETATM 6 C C4 PEG . . . C 2 -8.5 -0.687 -9.511 1 69.98 ? C4 PEG 801 A 1 HETATM 7 O O4 PEG . . . C 2 -9.89 -0.849 -9.628 1 62.94 ? O4 PEG 801 A 1 HETATM 8 H H11 PEG . . . C 2 -11.13 2.44 -7.094 1 69.06 ? H11 PEG 801 A 1 HETATM 9 H H12 PEG . . . C 2 -10.353 3.267 -5.992 1 69.06 ? H12 PEG 801 A 1 HETATM 10 H HO1 PEG . . . C 2 -10.587 1.734 -4.668 1 51.9 ? HO1 PEG 801 A 1 HETATM 11 H H21 PEG . . . C 2 -8.837 2.685 -7.663 1 89.04 ? H21 PEG 801 A 1 HETATM 12 H H22 PEG . . . C 2 -8.446 1.898 -6.348 1 89.04 ? H22 PEG 801 A 1 HETATM 13 H H31 PEG . . . C 2 -8.012 1.286 -9.158 1 80.52 ? H31 PEG 801 A 1 HETATM 14 H H32 PEG . . . C 2 -7.385 0.305 -8.088 1 80.52 ? H32 PEG 801 A 1 HETATM 15 H H41 PEG . . . C 2 -8.12 -0.533 -10.39 1 83.97 ? H41 PEG 801 A 1 HETATM 16 H H42 PEG . . . C 2 -8.113 -1.491 -9.131 1 83.97 ? H42 PEG 801 A 1 HETATM 17 H HO4 PEG . . . C 2 -10.088 -1.671 -9.54 1 75.53 ? HO4 PEG 801 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #