data_6FFM # _model_server_result.job_id uxVczLB7C9-PIpEC7lws9A _model_server_result.datetime_utc '2025-03-05 03:01:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ffm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 6FFM # _exptl.entry_id 6FFM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-[(5~{R})-4,5-dihydro-1,2-oxazol-5-yl]phenyl]ethanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FFM _cell.length_a 42.491 _cell.length_b 42.491 _cell.length_c 265.213 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FFM _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 21.2455 -36.798285 -44.202167 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 107 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 151 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C05 _struct_conn.ptnr2_label_comp_id D8N _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id D8N _struct_conn.ptnr2_auth_seq_id 500 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.813 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id D8N _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-[(5~{R})-4,5-dihydro-1,2-oxazol-5-yl]phenyl]ethanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C05 D8N sing 83 n n C01 C02 D8N sing 84 n n C05 N04 D8N doub 85 n n C11 C10 D8N doub 86 n y C11 C06 D8N sing 87 n y C02 C06 D8N sing 88 n n C02 O03 D8N sing 89 n n C10 C09 D8N sing 90 n y C06 C07 D8N doub 91 n y N04 O03 D8N sing 92 n n C09 N12 D8N sing 93 n n C09 C08 D8N doub 94 n y C07 C08 D8N sing 95 n y N12 C13 D8N sing 96 n n C13 O14 D8N doub 97 n n C13 C15 D8N sing 98 n n C01 H012 D8N sing 99 n n C01 H011 D8N sing 100 n n C02 H021 D8N sing 101 n n C07 H071 D8N sing 102 n n C08 H081 D8N sing 103 n n C10 H101 D8N sing 104 n n C11 H111 D8N sing 105 n n C15 H152 D8N sing 106 n n C15 H151 D8N sing 107 n n C15 H153 D8N sing 108 n n N12 H121 D8N sing 109 n n C05 H1 D8N sing 110 n n # _atom_sites.entry_id 6FFM _atom_sites.fract_transf_matrix[1][1] 0.023534 _atom_sites.fract_transf_matrix[1][2] 0.013588 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D8N A 1 500 500 D8N lig . C 3 HOH A 1 601 3 HOH HOH . C 3 HOH A 2 602 14 HOH HOH . C 3 HOH A 3 603 15 HOH HOH . C 3 HOH A 4 604 1 HOH HOH . C 3 HOH A 5 605 16 HOH HOH . C 3 HOH A 6 606 18 HOH HOH . C 3 HOH A 7 607 6 HOH HOH . C 3 HOH A 8 608 13 HOH HOH . C 3 HOH A 9 609 17 HOH HOH . C 3 HOH A 10 610 7 HOH HOH . C 3 HOH A 11 611 8 HOH HOH . C 3 HOH A 12 612 4 HOH HOH . C 3 HOH A 13 613 12 HOH HOH . C 3 HOH A 14 614 10 HOH HOH . C 3 HOH A 15 615 19 HOH HOH . C 3 HOH A 16 616 5 HOH HOH . C 3 HOH A 17 617 2 HOH HOH . C 3 HOH A 18 618 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 D8N . A . B 2 -0.102 6.418 -9.659 0.55 54.34 ? C01 D8N 500 A 1 HETATM 2 C C02 D8N . A . B 2 -1.127 5.407 -9.303 0.55 58.55 ? C02 D8N 500 A 1 HETATM 3 C C05 D8N . A . B 2 1.146 5.742 -9.563 0.55 46.04 ? C05 D8N 500 A 1 HETATM 4 C C06 D8N . A . B 2 -2.324 6.051 -8.691 0.55 60.08 ? C06 D8N 500 A 1 HETATM 5 C C07 D8N . A . B 2 -2.237 6.663 -7.294 0.55 60.84 ? C07 D8N 500 A 1 HETATM 6 C C08 D8N . A . B 2 -3.465 7.322 -6.67 0.55 61.46 ? C08 D8N 500 A 1 HETATM 7 C C09 D8N . A . B 2 -4.783 7.366 -7.439 0.55 62.29 ? C09 D8N 500 A 1 HETATM 8 C C10 D8N . A . B 2 -4.871 6.756 -8.835 0.55 60.95 ? C10 D8N 500 A 1 HETATM 9 C C11 D8N . A . B 2 -3.643 6.097 -9.461 0.55 60.68 ? C11 D8N 500 A 1 HETATM 10 C C13 D8N . A . B 2 -6.464 7.524 -5.574 0.55 63.15 ? C13 D8N 500 A 1 HETATM 11 C C15 D8N . A . B 2 -7.692 8.19 -4.959 0.55 62.82 ? C15 D8N 500 A 1 HETATM 12 N N04 D8N . A . B 2 0.986 4.67 -8.603 0.55 54.34 ? N04 D8N 500 A 1 HETATM 13 N N12 D8N . A . B 2 -5.95 7.994 -6.847 0.55 62.77 ? N12 D8N 500 A 1 HETATM 14 O O03 D8N . A . B 2 -0.46 4.517 -8.337 0.55 58.45 ? O03 D8N 500 A 1 HETATM 15 O O14 D8N . A . B 2 -5.929 6.627 -5.013 0.55 63.24 ? O14 D8N 500 A 1 HETATM 16 H H012 D8N . A . B 2 -0.243 6.733 -10.566 0.55 65.21 ? H012 D8N 500 A 1 HETATM 17 H H011 D8N . A . B 2 -0.131 7.158 -9.032 0.55 65.21 ? H011 D8N 500 A 1 HETATM 18 H H021 D8N . A . B 2 -1.383 4.905 -10.093 0.55 70.26 ? H021 D8N 500 A 1 HETATM 19 H H071 D8N . A . B 2 -1.435 6.636 -6.824 0.55 73.01 ? H071 D8N 500 A 1 HETATM 20 H H081 D8N . A . B 2 -3.411 7.694 -5.819 0.55 73.75 ? H081 D8N 500 A 1 HETATM 21 H H101 D8N . A . B 2 -5.673 6.783 -9.305 0.55 73.14 ? H101 D8N 500 A 1 HETATM 22 H H111 D8N . A . B 2 -3.698 5.725 -10.311 0.55 72.82 ? H111 D8N 500 A 1 HETATM 23 H H152 D8N . A . B 2 -8.409 8.212 -5.611 0.55 75.38 ? H152 D8N 500 A 1 HETATM 24 H H151 D8N . A . B 2 -7.47 9.096 -4.693 0.55 75.38 ? H151 D8N 500 A 1 HETATM 25 H H153 D8N . A . B 2 -7.978 7.686 -4.181 0.55 75.38 ? H153 D8N 500 A 1 HETATM 26 H H121 D8N . A . B 2 -6.339 8.644 -7.253 0.55 75.33 ? H121 D8N 500 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 78 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 1431 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #