data_6FHD # _model_server_result.job_id Fkt803yl228oYvF4IdslsA _model_server_result.datetime_utc '2024-11-27 01:29:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fhd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 6FHD # _exptl.entry_id 6FHD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 121.89 _cell.angle_gamma 90 _cell.entry_id 6FHD _cell.length_a 41.03 _cell.length_b 11.73 _cell.length_c 24.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FHD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 36-meric _pdbx_struct_assembly.oligomeric_count 36 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 1 2 A,B,C,D,E,F,G 1 3 A,B,C,D,E,F,G 1 4 A,B,C,D,E,F,G 1 5 A,B,C,D,E,F,G 1 6 A,B,C,D,E,F,G 1 7 A,B,C,D,E,F,G 1 8 A,B,C,D,E,F,G 1 9 A,B,C,D,E,F,G 1 10 A,B,C,D,E,F,G 1 11 A,B,C,D,E,F,G 1 12 A,B,C,D,E,F,G 1 13 A,B,C,D,E,F,G 1 14 A,B,C,D,E,F,G 1 15 A,B,C,D,E,F,G 1 16 A,B,C,D,E,F,G 1 17 A,B,C,D,E,F,G 1 18 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_545 x,y-1,z 1 0 0 0 1 0 0 0 1 0 -11.73 0 3 'crystal symmetry operation' 1_535 x,y-2,z 1 0 0 0 1 0 0 0 1 0 -23.46 0 4 'crystal symmetry operation' 1_525 x,y-3,z 1 0 0 0 1 0 0 0 1 0 -35.19 0 5 'crystal symmetry operation' 1_515 x,y-4,z 1 0 0 0 1 0 0 0 1 0 -46.92 0 6 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 0 11.73 0 7 'crystal symmetry operation' 1_575 x,y+2,z 1 0 0 0 1 0 0 0 1 0 23.46 0 8 'crystal symmetry operation' 1_585 x,y+3,z 1 0 0 0 1 0 0 0 1 0 35.19 0 9 'crystal symmetry operation' 1_595 x,y+4,z 1 0 0 0 1 0 0 0 1 0 46.92 0 10 'crystal symmetry operation' 4_748 -x+5/2,y-1/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 -5.865 62.686388 11 'crystal symmetry operation' 4_758 -x+5/2,y+1/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 5.865 62.686388 12 'crystal symmetry operation' 4_738 -x+5/2,y-3/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 -17.595 62.686388 13 'crystal symmetry operation' 4_728 -x+5/2,y-5/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 -29.325 62.686388 14 'crystal symmetry operation' 4_718 -x+5/2,y-7/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 -41.055 62.686388 15 'crystal symmetry operation' 4_768 -x+5/2,y+3/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 17.595 62.686388 16 'crystal symmetry operation' 4_778 -x+5/2,y+5/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 29.325 62.686388 17 'crystal symmetry operation' 4_788 -x+5/2,y+7/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 41.055 62.686388 18 'crystal symmetry operation' 4_798 -x+5/2,y+9/2,-z+3 -1 0 0 0 1 0 0 0 -1 63.571338 52.785 62.686388 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6FHD _atom_sites.fract_transf_matrix[1][1] 0.024372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.015166 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.085251 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.047858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 B 1 101 1 SO4 SO4 . D 3 NA B 1 102 1 NA NA . E 2 SO4 A 1 101 2 SO4 SO4 . F 4 HOH B 1 201 4 HOH HOH . F 4 HOH B 2 202 3 HOH HOH . F 4 HOH B 3 203 6 HOH HOH . G 4 HOH A 1 201 2 HOH HOH . G 4 HOH A 2 202 5 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.028 _atom_site.Cartn_y -2.136 _atom_site.Cartn_z 20.895 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 25.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #