data_6FIT # _model_server_result.job_id AePx1U2uKwEGhJRHEOtzwA _model_server_result.datetime_utc '2024-11-22 13:29:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":148}' # _entry.id 6FIT # _exptl.entry_id 6FIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 500.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ADENOSINE MONOTUNGSTATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FIT _cell.length_a 50.7 _cell.length_b 50.7 _cell.length_c 267 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 44.5 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 96 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 96 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id W _struct_conn.ptnr2_label_comp_id AMW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id AMW _struct_conn.ptnr2_auth_seq_id 148 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.53 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H14 N5 O7 W' _chem_comp.formula_weight 500.087 _chem_comp.id AMW _chem_comp.mon_nstd_flag . _chem_comp.name 'ADENOSINE MONOTUNGSTATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag W O1W AMW doub 13 n n W O2W AMW sing 14 n n W O3W AMW sing 15 n n W O5' AMW sing 16 n n O2W HOW2 AMW sing 17 n n O3W HOW3 AMW sing 18 n n O5' C5' AMW sing 19 n n C5' C4' AMW sing 20 n n C5' "H5'1" AMW sing 21 n n C5' "H5'2" AMW sing 22 n n C4' O4' AMW sing 23 n n C4' C3' AMW sing 24 n n C4' H4' AMW sing 25 n n O4' C1' AMW sing 26 n n C3' O3' AMW sing 27 n n C3' C2' AMW sing 28 n n C3' H3' AMW sing 29 n n O3' HO3' AMW sing 30 n n C2' O2' AMW sing 31 n n C2' C1' AMW sing 32 n n C2' H2' AMW sing 33 n n O2' HO2' AMW sing 34 n n C1' N9 AMW sing 35 n n C1' H1' AMW sing 36 n n N9 C8 AMW sing 37 n y N9 C4 AMW sing 38 n y C8 N7 AMW doub 39 n y C8 H8 AMW sing 40 n n N7 C5 AMW sing 41 n y C5 C6 AMW sing 42 n y C5 C4 AMW doub 43 n y C6 N6 AMW sing 44 n n C6 N1 AMW doub 45 n y N6 HN61 AMW sing 46 n n N6 HN62 AMW sing 47 n n N1 C2 AMW sing 48 n y C2 N3 AMW doub 49 n y C2 H2 AMW sing 50 n n N3 C4 AMW sing 51 n y # _atom_sites.entry_id 6FIT _atom_sites.fract_transf_matrix[1][1] 0.019724 _atom_sites.fract_transf_matrix[1][2] 0.011388 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022775 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMW A 1 148 96 AMW AMW . C 3 HOH A 1 149 1 HOH HOH . C 3 HOH A 2 150 2 HOH HOH . C 3 HOH A 3 151 3 HOH HOH . C 3 HOH A 4 152 4 HOH HOH . C 3 HOH A 5 153 5 HOH HOH . C 3 HOH A 6 154 6 HOH HOH . C 3 HOH A 7 155 7 HOH HOH . C 3 HOH A 8 156 8 HOH HOH . C 3 HOH A 9 157 9 HOH HOH . C 3 HOH A 10 158 10 HOH HOH . C 3 HOH A 11 159 11 HOH HOH . C 3 HOH A 12 160 12 HOH HOH . C 3 HOH A 13 161 13 HOH HOH . C 3 HOH A 14 162 14 HOH HOH . C 3 HOH A 15 163 15 HOH HOH . C 3 HOH A 16 164 16 HOH HOH . C 3 HOH A 17 165 17 HOH HOH . C 3 HOH A 18 166 18 HOH HOH . C 3 HOH A 19 167 19 HOH HOH . C 3 HOH A 20 168 20 HOH HOH . C 3 HOH A 21 169 21 HOH HOH . C 3 HOH A 22 170 22 HOH HOH . C 3 HOH A 23 171 23 HOH HOH . C 3 HOH A 24 172 24 HOH HOH . C 3 HOH A 25 173 25 HOH HOH . C 3 HOH A 26 174 26 HOH HOH . C 3 HOH A 27 175 27 HOH HOH . C 3 HOH A 28 176 28 HOH HOH . C 3 HOH A 29 177 29 HOH HOH . C 3 HOH A 30 178 30 HOH HOH . C 3 HOH A 31 179 31 HOH HOH . C 3 HOH A 32 180 32 HOH HOH . C 3 HOH A 33 181 33 HOH HOH . C 3 HOH A 34 182 34 HOH HOH . C 3 HOH A 35 183 35 HOH HOH . C 3 HOH A 36 184 36 HOH HOH . C 3 HOH A 37 185 37 HOH HOH . C 3 HOH A 38 186 38 HOH HOH . C 3 HOH A 39 187 39 HOH HOH . C 3 HOH A 40 188 40 HOH HOH . C 3 HOH A 41 189 41 HOH HOH . C 3 HOH A 42 190 42 HOH HOH . C 3 HOH A 43 191 43 HOH HOH . C 3 HOH A 44 192 44 HOH HOH . C 3 HOH A 45 193 45 HOH HOH . C 3 HOH A 46 194 46 HOH HOH . C 3 HOH A 47 195 47 HOH HOH . C 3 HOH A 48 196 48 HOH HOH . C 3 HOH A 49 197 49 HOH HOH . C 3 HOH A 50 198 50 HOH HOH . C 3 HOH A 51 199 51 HOH HOH . C 3 HOH A 52 200 52 HOH HOH . C 3 HOH A 53 201 53 HOH HOH . C 3 HOH A 54 202 54 HOH HOH . C 3 HOH A 55 203 55 HOH HOH . C 3 HOH A 56 204 56 HOH HOH . C 3 HOH A 57 205 57 HOH HOH . C 3 HOH A 58 206 58 HOH HOH . C 3 HOH A 59 207 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 W W AMW . . . B 2 10.22 18.514 20.891 0.5 67.03 ? W AMW 148 A 1 HETATM 2 O O1W AMW . . . B 2 10.226 19.244 19.354 0.5 69.91 ? O1W AMW 148 A 1 HETATM 3 O O2W AMW . . . B 2 11.069 17.044 21.136 0.5 59.9 ? O2W AMW 148 A 1 HETATM 4 O O3W AMW . . . B 2 8.622 17.515 20.507 0.5 60.11 ? O3W AMW 148 A 1 HETATM 5 O O5' AMW . . . B 2 9.337 19.262 22.167 1 54.37 ? O5' AMW 148 A 1 HETATM 6 C C5' AMW . . . B 2 9.085 20.439 22.63 1 38.23 ? C5' AMW 148 A 1 HETATM 7 C C4' AMW . . . B 2 9.423 20.536 24.147 1 43.63 ? C4' AMW 148 A 1 HETATM 8 O O4' AMW . . . B 2 9.181 21.875 24.764 1 37.08 ? O4' AMW 148 A 1 HETATM 9 C C3' AMW . . . B 2 8.343 19.56 24.747 1 41.23 ? C3' AMW 148 A 1 HETATM 10 O O3' AMW . . . B 2 8.827 18.75 25.805 1 44.67 ? O3' AMW 148 A 1 HETATM 11 C C2' AMW . . . B 2 7.273 20.532 25.239 1 48.6 ? C2' AMW 148 A 1 HETATM 12 O O2' AMW . . . B 2 6.415 19.933 26.216 1 40.44 ? O2' AMW 148 A 1 HETATM 13 C C1' AMW . . . B 2 8.176 21.655 25.823 1 46.66 ? C1' AMW 148 A 1 HETATM 14 N N9 AMW . . . B 2 7.57 22.995 26.136 1 55.68 ? N9 AMW 148 A 1 HETATM 15 C C8 AMW . . . B 2 6.847 23.801 25.292 1 59.16 ? C8 AMW 148 A 1 HETATM 16 N N7 AMW . . . B 2 7.359 25.025 25.164 1 60.73 ? N7 AMW 148 A 1 HETATM 17 C C5 AMW . . . B 2 7.959 25.154 26.413 1 55.44 ? C5 AMW 148 A 1 HETATM 18 C C6 AMW . . . B 2 8.448 26.325 27.158 1 53.52 ? C6 AMW 148 A 1 HETATM 19 N N6 AMW . . . B 2 8.631 27.519 26.553 1 42.43 ? N6 AMW 148 A 1 HETATM 20 N N1 AMW . . . B 2 8.684 26.081 28.474 1 60.82 ? N1 AMW 148 A 1 HETATM 21 C C2 AMW . . . B 2 8.904 24.844 28.963 1 63.16 ? C2 AMW 148 A 1 HETATM 22 N N3 AMW . . . B 2 8.617 23.69 28.308 1 60.31 ? N3 AMW 148 A 1 HETATM 23 C C4 AMW . . . B 2 8.09 23.925 27.041 1 59.9 ? C4 AMW 148 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #