data_6FIV
#
_model_server_result.job_id            EnBYsn1i42XWhHik7ifx0A 
_model_server_result.datetime_utc      '2024-11-17 07:52:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fiv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    6FIV 
#
_exptl.entry_id    6FIV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              909.077 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FIV 
_cell.length_a            50.76 
_cell.length_b            50.76 
_cell.length_c            73.36 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FIV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 48.906667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            C 
_struct_conn.ptnr1_label_atom_id            C2 
_struct_conn.ptnr1_label_comp_id            3TL 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             3TL 
_struct_conn.ptnr1_auth_seq_id              201 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            C2 
_struct_conn.ptnr2_label_comp_id            3TL 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             3TL 
_struct_conn.ptnr2_auth_seq_id              201 
_struct_conn.ptnr2_symmetry                 5_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.542 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C50 H64 N6 O10' 
_chem_comp.formula_weight    909.077 
_chem_comp.id                3TL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate' 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     'TL-3, C2 symmetric inhibitor' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C31 O8 3TL doub 1 n n 
C31 O9 3TL sing 2 n n 
C31 N4 3TL sing 3 n n 
O9 CA 3TL sing 4 n n 
CA C 3TL sing 5 n n 
CA HA1 3TL sing 6 n n 
CA HA2 3TL sing 7 n n 
C C13 3TL doub 8 n y 
C C17 3TL sing 9 n y 
C13 C14 3TL sing 10 n y 
C13 H13 3TL sing 11 n n 
C14 C15 3TL doub 12 n y 
C14 H14 3TL sing 13 n n 
C15 C16 3TL sing 14 n y 
C15 H15 3TL sing 15 n n 
C16 C17 3TL doub 16 n y 
C16 H16 3TL sing 17 n n 
C17 H17 3TL sing 18 n n 
N4 C18 3TL sing 19 n n 
N4 HN4 3TL sing 20 n n 
C18 C19 3TL sing 21 n n 
C18 C20 3TL sing 22 n n 
C18 H18 3TL sing 23 n n 
C19 O4 3TL doub 24 n n 
C19 N2 3TL sing 25 n n 
C20 H201 3TL sing 26 n n 
C20 H202 3TL sing 27 n n 
C20 H203 3TL sing 28 n n 
N2 C10 3TL sing 29 n n 
N2 HN2 3TL sing 30 n n 
C10 C11 3TL sing 31 n n 
C10 C12 3TL sing 32 n n 
C10 H10 3TL sing 33 n n 
C11 O2 3TL doub 34 n n 
C11 N1 3TL sing 35 n n 
C12 CG2 3TL sing 36 n n 
C12 CG1 3TL sing 37 n n 
C12 H12 3TL sing 38 n n 
CG2 HG21 3TL sing 39 n n 
CG2 HG22 3TL sing 40 n n 
CG2 HG23 3TL sing 41 n n 
CG1 HG11 3TL sing 42 n n 
CG1 HG12 3TL sing 43 n n 
CG1 HG13 3TL sing 44 n n 
C2 O1 3TL sing 45 n n 
C2 C1 3TL sing 46 n n 
C2 H2 3TL sing 47 n n 
C2 C52 3TL sing 48 n n 
O1 HO1 3TL sing 49 n n 
C1 N1 3TL sing 50 n n 
C1 C3 3TL sing 51 n n 
C1 H1 3TL sing 52 n n 
N1 HN1 3TL sing 53 n n 
C3 C4 3TL sing 54 n n 
C3 H31 3TL sing 55 n n 
C3 H32 3TL sing 56 n n 
C4 C5 3TL doub 57 n y 
C4 C9 3TL sing 58 n y 
C5 C6 3TL sing 59 n y 
C5 H5 3TL sing 60 n n 
C9 C8 3TL doub 61 n y 
C9 H9 3TL sing 62 n n 
C6 C7 3TL doub 63 n y 
C6 H6 3TL sing 64 n n 
C8 C7 3TL sing 65 n y 
C8 H8 3TL sing 66 n n 
C7 H7 3TL sing 67 n n 
N51 C51 3TL sing 68 n n 
N51 HN51 3TL sing 69 n n 
N51 C61 3TL sing 70 n n 
C51 C52 3TL sing 71 n n 
C51 C53 3TL sing 72 n n 
C51 H51 3TL sing 73 n n 
C52 O51 3TL sing 74 n n 
C52 H52 3TL sing 75 n n 
O51 HO51 3TL sing 76 n n 
C53 C54 3TL sing 77 n n 
C53 H531 3TL sing 78 n n 
C53 H532 3TL sing 79 n n 
C54 C55 3TL doub 80 n y 
C54 C59 3TL sing 81 n y 
C55 C56 3TL sing 82 n y 
C55 H55 3TL sing 83 n n 
C59 C58 3TL doub 84 n y 
C59 H59 3TL sing 85 n n 
C56 C57 3TL doub 86 n y 
C56 H56 3TL sing 87 n n 
C58 C57 3TL sing 88 n y 
C58 H58 3TL sing 89 n n 
C57 H57 3TL sing 90 n n 
N52 C60 3TL sing 91 n n 
N52 HN52 3TL sing 92 n n 
N52 C69 3TL sing 93 n n 
C60 C61 3TL sing 94 n n 
C60 C62 3TL sing 95 n n 
C60 H60 3TL sing 96 n n 
C61 O52 3TL doub 97 n n 
C62 CG6 3TL sing 98 n n 
C62 CG5 3TL sing 99 n n 
C62 H62 3TL sing 100 n n 
CG6 HG61 3TL sing 101 n n 
CG6 HG62 3TL sing 102 n n 
CG6 HG63 3TL sing 103 n n 
CG5 HG51 3TL sing 104 n n 
CG5 HG52 3TL sing 105 n n 
CG5 HG53 3TL sing 106 n n 
N54 C68 3TL sing 107 n n 
N54 HN54 3TL sing 108 n n 
N54 C81 3TL sing 109 n n 
C68 C69 3TL sing 110 n n 
C68 C70 3TL sing 111 n n 
C68 H68 3TL sing 112 n n 
C69 O54 3TL doub 113 n n 
C70 H701 3TL sing 114 n n 
C70 H702 3TL sing 115 n n 
C70 H703 3TL sing 116 n n 
C81 O58 3TL doub 117 n n 
C81 O59 3TL sing 118 n n 
O59 CA5 3TL sing 119 n n 
CA5 C50 3TL sing 120 n n 
CA5 HA51 3TL sing 121 n n 
CA5 HA52 3TL sing 122 n n 
C50 C63 3TL doub 123 n y 
C50 C67 3TL sing 124 n y 
C63 C64 3TL sing 125 n y 
C63 H63 3TL sing 126 n n 
C64 C65 3TL doub 127 n y 
C64 H64 3TL sing 128 n n 
C65 C66 3TL sing 129 n y 
C65 H65 3TL sing 130 n n 
C66 C67 3TL doub 131 n y 
C66 H66 3TL sing 132 n n 
C67 H67 3TL sing 133 n n 
#
_atom_sites.entry_id                     6FIV 
_atom_sites.fract_transf_matrix[1][1]    0.0197 
_atom_sites.fract_transf_matrix[1][2]    0.011374 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022748 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013631 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 251 251 SO4 SO4 . 
C 3 3TL A 1 201 201 3TL 3TL . 
D 4 HOH A 1 301 301 HOH HOH . 
D 4 HOH A 2 302 302 HOH HOH . 
D 4 HOH A 3 303 303 HOH HOH . 
D 4 HOH A 4 304 304 HOH HOH . 
D 4 HOH A 5 305 305 HOH HOH . 
D 4 HOH A 6 306 306 HOH HOH . 
D 4 HOH A 7 307 307 HOH HOH . 
D 4 HOH A 8 308 308 HOH HOH . 
D 4 HOH A 9 309 309 HOH HOH . 
D 4 HOH A 10 310 310 HOH HOH . 
D 4 HOH A 11 311 311 HOH HOH . 
D 4 HOH A 12 312 312 HOH HOH . 
D 4 HOH A 13 313 313 HOH HOH . 
D 4 HOH A 14 314 314 HOH HOH . 
D 4 HOH A 15 315 315 HOH HOH . 
D 4 HOH A 16 316 316 HOH HOH . 
D 4 HOH A 17 317 317 HOH HOH . 
D 4 HOH A 18 318 318 HOH HOH . 
D 4 HOH A 19 319 319 HOH HOH . 
D 4 HOH A 20 320 320 HOH HOH . 
D 4 HOH A 21 321 321 HOH HOH . 
D 4 HOH A 22 322 322 HOH HOH . 
D 4 HOH A 23 323 323 HOH HOH . 
D 4 HOH A 24 324 324 HOH HOH . 
D 4 HOH A 25 325 325 HOH HOH . 
D 4 HOH A 26 326 326 HOH HOH . 
D 4 HOH A 27 327 327 HOH HOH . 
D 4 HOH A 28 328 328 HOH HOH . 
D 4 HOH A 29 329 329 HOH HOH . 
D 4 HOH A 30 330 330 HOH HOH . 
D 4 HOH A 31 331 331 HOH HOH . 
D 4 HOH A 32 332 332 HOH HOH . 
D 4 HOH A 33 333 333 HOH HOH . 
D 4 HOH A 34 334 334 HOH HOH . 
D 4 HOH A 35 335 335 HOH HOH . 
D 4 HOH A 36 336 336 HOH HOH . 
D 4 HOH A 37 337 337 HOH HOH . 
D 4 HOH A 38 338 338 HOH HOH . 
D 4 HOH A 39 339 339 HOH HOH . 
D 4 HOH A 40 340 340 HOH HOH . 
D 4 HOH A 41 341 341 HOH HOH . 
D 4 HOH A 42 342 342 HOH HOH . 
D 4 HOH A 43 343 343 HOH HOH . 
D 4 HOH A 44 344 344 HOH HOH . 
D 4 HOH A 45 345 345 HOH HOH . 
D 4 HOH A 46 346 346 HOH HOH . 
D 4 HOH A 47 347 347 HOH HOH . 
D 4 HOH A 48 348 348 HOH HOH . 
D 4 HOH A 49 349 349 HOH HOH . 
D 4 HOH A 50 350 350 HOH HOH . 
D 4 HOH A 51 351 351 HOH HOH . 
D 4 HOH A 52 352 352 HOH HOH . 
D 4 HOH A 53 353 353 HOH HOH . 
D 4 HOH A 54 354 354 HOH HOH . 
D 4 HOH A 55 355 355 HOH HOH . 
D 4 HOH A 56 356 356 HOH HOH . 
D 4 HOH A 57 357 357 HOH HOH . 
D 4 HOH A 58 358 358 HOH HOH . 
D 4 HOH A 59 359 359 HOH HOH . 
D 4 HOH A 60 360 360 HOH HOH . 
D 4 HOH A 61 361 361 HOH HOH . 
D 4 HOH A 62 362 362 HOH HOH . 
D 4 HOH A 63 363 363 HOH HOH . 
D 4 HOH A 64 364 364 HOH HOH . 
D 4 HOH A 65 365 365 HOH HOH . 
D 4 HOH A 66 366 366 HOH HOH . 
D 4 HOH A 67 367 367 HOH HOH . 
D 4 HOH A 68 368 368 HOH HOH . 
D 4 HOH A 69 369 369 HOH HOH . 
D 4 HOH A 70 370 370 HOH HOH . 
D 4 HOH A 71 371 371 HOH HOH . 
D 4 HOH A 72 372 372 HOH HOH . 
D 4 HOH A 73 373 373 HOH HOH . 
D 4 HOH A 74 374 374 HOH HOH . 
D 4 HOH A 75 375 375 HOH HOH . 
D 4 HOH A 76 376 376 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C31 3TL . . . C 3 24.304 5.231 32.157 1 19.45 ? C31 3TL 201 A 1 
HETATM 2 O O8 3TL . . . C 3 25.293 5.275 31.435 1 20.42 ? O8 3TL 201 A 1 
HETATM 3 O O9 3TL . . . C 3 23.849 6.26 32.903 1 10.51 ? O9 3TL 201 A 1 
HETATM 4 C CA 3TL . . . C 3 24.737 7.4 32.926 1 8.71 ? CA 3TL 201 A 1 
HETATM 5 C C 3TL . . . C 3 24.188 8.193 34.112 1 14.54 ? C 3TL 201 A 1 
HETATM 6 C C13 3TL . . . C 3 24.936 8.302 35.302 1 7.59 ? C13 3TL 201 A 1 
HETATM 7 C C14 3TL . . . C 3 24.386 9.019 36.388 1 19 ? C14 3TL 201 A 1 
HETATM 8 C C15 3TL . . . C 3 23.125 9.638 36.288 1 15.42 ? C15 3TL 201 A 1 
HETATM 9 C C16 3TL . . . C 3 22.391 9.557 35.079 1 15.28 ? C16 3TL 201 A 1 
HETATM 10 C C17 3TL . . . C 3 22.914 8.807 34.006 1 19.17 ? C17 3TL 201 A 1 
HETATM 11 N N4 3TL . . . C 3 23.588 4.121 32.278 1 20.07 ? N4 3TL 201 A 1 
HETATM 12 C C18 3TL . . . C 3 23.673 2.957 31.378 1 16.12 ? C18 3TL 201 A 1 
HETATM 13 C C19 3TL . . . C 3 23.044 3.246 29.985 1 12.44 ? C19 3TL 201 A 1 
HETATM 14 O O4 3TL . . . C 3 21.947 3.726 29.784 1 10.35 ? O4 3TL 201 A 1 
HETATM 15 C C20 3TL . . . C 3 22.973 1.75 32.032 1 11.66 ? C20 3TL 201 A 1 
HETATM 16 N N2 3TL . . . C 3 23.79 2.9 28.934 1 17.67 ? N2 3TL 201 A 1 
HETATM 17 C C10 3TL . . . C 3 23.191 3.051 27.566 1 7.01 ? C10 3TL 201 A 1 
HETATM 18 C C11 3TL . . . C 3 23.408 1.719 26.796 1 14.4 ? C11 3TL 201 A 1 
HETATM 19 O O2 3TL . . . C 3 24.499 1.542 26.254 1 17.48 ? O2 3TL 201 A 1 
HETATM 20 C C12 3TL . . . C 3 23.854 4.293 26.93 1 14.01 ? C12 3TL 201 A 1 
HETATM 21 C CG2 3TL . . . C 3 23.219 5.615 27.408 1 10.75 ? CG2 3TL 201 A 1 
HETATM 22 C CG1 3TL . . . C 3 23.912 4.22 25.406 1 43.39 ? CG1 3TL 201 A 1 
HETATM 23 C C2 3TL . . . C 3 21.539 -0.616 24.917 1 32.87 ? C2 3TL 201 A 1 
HETATM 24 O O1 3TL . . . C 3 20.218 -0.564 25.454 1 46.97 ? O1 3TL 201 A 1 
HETATM 25 C C1 3TL . . . C 3 22.601 -0.456 26.037 1 23.74 ? C1 3TL 201 A 1 
HETATM 26 N N1 3TL . . . C 3 22.435 0.811 26.77 1 17.31 ? N1 3TL 201 A 1 
HETATM 27 C C3 3TL . . . C 3 22.677 -1.682 26.932 1 31.7 ? C3 3TL 201 A 1 
HETATM 28 C C4 3TL . . . C 3 23.571 -1.625 28.155 1 28.36 ? C4 3TL 201 A 1 
HETATM 29 C C5 3TL . . . C 3 22.992 -1.45 29.438 1 32.16 ? C5 3TL 201 A 1 
HETATM 30 C C9 3TL . . . C 3 24.968 -1.784 28.027 1 37.17 ? C9 3TL 201 A 1 
HETATM 31 C C6 3TL . . . C 3 23.803 -1.419 30.588 1 34.1 ? C6 3TL 201 A 1 
HETATM 32 C C8 3TL . . . C 3 25.782 -1.676 29.176 1 44.27 ? C8 3TL 201 A 1 
HETATM 33 C C7 3TL . . . C 3 25.207 -1.491 30.45 1 37.33 ? C7 3TL 201 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#