data_6FJ1
#
_model_server_result.job_id            ycpFNaubbUbBLenTsnsIEg 
_model_server_result.datetime_utc      '2024-12-01 07:30:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fj1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":501}' 
#
_entry.id    6FJ1 
#
_exptl.entry_id    6FJ1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              267.26 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.14 
_cell.angle_gamma         90 
_cell.entry_id            6FJ1 
_cell.length_a            208.54 
_cell.length_b            131.97 
_cell.length_c            70.09 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FJ1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,S 1 1 
B,I,J,K,L,M,N,T 2 1 
C,O,P,Q,R,U 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 I N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 226 A CYS 442 1_555 E CAN NXL . A NXL 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.647 ? 
covale ? covale2 B SG CYS 226 B CYS 442 1_555 I CAN NXL . B NXL 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.627 ? 
covale ? covale3 C SG CYS 226 C CYS 442 1_555 O CAN NXL . C NXL 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.623 ? 
#
_chem_comp.formula           'C7 H13 N3 O6 S' 
_chem_comp.formula_weight    267.26 
_chem_comp.id                NXL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'avibactam, bound form;NXL104, bound form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
NAK CAO NXL sing 250 n n 
CAJ CAO NXL sing 251 n n 
CAJ N NXL sing 252 n n 
OAL SAR NXL sing 253 n n 
CAO CAH NXL sing 254 n n 
CAN N NXL sing 255 n n 
CAN OAC NXL doub 256 n n 
OAG SAR NXL doub 257 n n 
N CA NXL sing 258 n n 
SAR OAE NXL doub 259 n n 
SAR OAD NXL sing 260 n n 
O C NXL doub 261 n n 
CAH CB NXL sing 262 n n 
CA C NXL sing 263 n n 
CA CB NXL sing 264 n n 
C NAA NXL sing 265 n n 
NAK OAL NXL sing 266 n n 
CAN H1 NXL sing 267 n n 
CAJ H2 NXL sing 268 n n 
CAJ H3 NXL sing 269 n n 
CA H4 NXL sing 270 n n 
NAA H5 NXL sing 271 n n 
NAA H6 NXL sing 272 n n 
CB H7 NXL sing 273 n n 
CB H8 NXL sing 274 n n 
CAH H9 NXL sing 275 n n 
CAH H10 NXL sing 276 n n 
CAO H11 NXL sing 277 n n 
NAK H12 NXL sing 278 n n 
OAD H13 NXL sing 279 n n 
#
_atom_sites.entry_id                     6FJ1 
_atom_sites.fract_transf_matrix[1][1]    0.004795 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000012 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007577 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 P3G A 1 501 522 P3G P3G . 
E 3 NXL A 1 502 500 NXL NXL . 
F 4 GOL A 1 503 2 GOL GOL . 
G 4 GOL A 1 504 7 GOL GOL . 
H 5 CL A 1 505 1 CL CL . 
I 3 NXL B 1 501 500 NXL NXL . 
J 2 P3G B 1 502 522 P3G P3G . 
K 4 GOL B 1 503 1 GOL GOL . 
L 4 GOL B 1 504 3 GOL GOL . 
M 4 GOL B 1 505 6 GOL GOL . 
N 4 GOL B 1 506 8 GOL GOL . 
O 3 NXL C 1 501 500 NXL NXL . 
P 2 P3G C 1 502 522 P3G P3G . 
Q 4 GOL C 1 503 4 GOL GOL . 
R 4 GOL C 1 504 5 GOL GOL . 
S 6 HOH A 1 601 55 HOH HOH . 
S 6 HOH A 2 602 54 HOH HOH . 
S 6 HOH A 3 603 1 HOH HOH . 
S 6 HOH A 4 604 76 HOH HOH . 
S 6 HOH A 5 605 42 HOH HOH . 
S 6 HOH A 6 606 48 HOH HOH . 
S 6 HOH A 7 607 26 HOH HOH . 
S 6 HOH A 8 608 13 HOH HOH . 
S 6 HOH A 9 609 105 HOH HOH . 
S 6 HOH A 10 610 69 HOH HOH . 
S 6 HOH A 11 611 35 HOH HOH . 
S 6 HOH A 12 612 29 HOH HOH . 
S 6 HOH A 13 613 15 HOH HOH . 
S 6 HOH A 14 614 86 HOH HOH . 
S 6 HOH A 15 615 106 HOH HOH . 
S 6 HOH A 16 616 39 HOH HOH . 
S 6 HOH A 17 617 95 HOH HOH . 
S 6 HOH A 18 618 74 HOH HOH . 
S 6 HOH A 19 619 80 HOH HOH . 
S 6 HOH A 20 620 40 HOH HOH . 
S 6 HOH A 21 621 32 HOH HOH . 
S 6 HOH A 22 622 30 HOH HOH . 
S 6 HOH A 23 623 82 HOH HOH . 
S 6 HOH A 24 624 27 HOH HOH . 
S 6 HOH A 25 625 57 HOH HOH . 
S 6 HOH A 26 626 68 HOH HOH . 
S 6 HOH A 27 627 56 HOH HOH . 
S 6 HOH A 28 628 81 HOH HOH . 
S 6 HOH A 29 629 73 HOH HOH . 
S 6 HOH A 30 630 78 HOH HOH . 
T 6 HOH B 1 601 52 HOH HOH . 
T 6 HOH B 2 602 2 HOH HOH . 
T 6 HOH B 3 603 41 HOH HOH . 
T 6 HOH B 4 604 58 HOH HOH . 
T 6 HOH B 5 605 104 HOH HOH . 
T 6 HOH B 6 606 4 HOH HOH . 
T 6 HOH B 7 607 3 HOH HOH . 
T 6 HOH B 8 608 102 HOH HOH . 
T 6 HOH B 9 609 6 HOH HOH . 
T 6 HOH B 10 610 43 HOH HOH . 
T 6 HOH B 11 611 11 HOH HOH . 
T 6 HOH B 12 612 97 HOH HOH . 
T 6 HOH B 13 613 36 HOH HOH . 
T 6 HOH B 14 614 5 HOH HOH . 
T 6 HOH B 15 615 14 HOH HOH . 
T 6 HOH B 16 616 33 HOH HOH . 
T 6 HOH B 17 617 22 HOH HOH . 
T 6 HOH B 18 618 92 HOH HOH . 
T 6 HOH B 19 619 10 HOH HOH . 
T 6 HOH B 20 620 23 HOH HOH . 
T 6 HOH B 21 621 7 HOH HOH . 
T 6 HOH B 22 622 19 HOH HOH . 
T 6 HOH B 23 623 77 HOH HOH . 
T 6 HOH B 24 624 38 HOH HOH . 
T 6 HOH B 25 625 9 HOH HOH . 
T 6 HOH B 26 626 75 HOH HOH . 
T 6 HOH B 27 627 28 HOH HOH . 
T 6 HOH B 28 628 91 HOH HOH . 
T 6 HOH B 29 629 25 HOH HOH . 
T 6 HOH B 30 630 71 HOH HOH . 
T 6 HOH B 31 631 94 HOH HOH . 
T 6 HOH B 32 632 45 HOH HOH . 
T 6 HOH B 33 633 46 HOH HOH . 
T 6 HOH B 34 634 65 HOH HOH . 
T 6 HOH B 35 635 47 HOH HOH . 
T 6 HOH B 36 636 79 HOH HOH . 
T 6 HOH B 37 637 88 HOH HOH . 
T 6 HOH B 38 638 85 HOH HOH . 
T 6 HOH B 39 639 89 HOH HOH . 
T 6 HOH B 40 640 103 HOH HOH . 
T 6 HOH B 41 641 93 HOH HOH . 
U 6 HOH C 1 601 63 HOH HOH . 
U 6 HOH C 2 602 59 HOH HOH . 
U 6 HOH C 3 603 70 HOH HOH . 
U 6 HOH C 4 604 99 HOH HOH . 
U 6 HOH C 5 605 18 HOH HOH . 
U 6 HOH C 6 606 17 HOH HOH . 
U 6 HOH C 7 607 8 HOH HOH . 
U 6 HOH C 8 608 72 HOH HOH . 
U 6 HOH C 9 609 61 HOH HOH . 
U 6 HOH C 10 610 16 HOH HOH . 
U 6 HOH C 11 611 50 HOH HOH . 
U 6 HOH C 12 612 67 HOH HOH . 
U 6 HOH C 13 613 34 HOH HOH . 
U 6 HOH C 14 614 49 HOH HOH . 
U 6 HOH C 15 615 24 HOH HOH . 
U 6 HOH C 16 616 21 HOH HOH . 
U 6 HOH C 17 617 20 HOH HOH . 
U 6 HOH C 18 618 60 HOH HOH . 
U 6 HOH C 19 619 66 HOH HOH . 
U 6 HOH C 20 620 84 HOH HOH . 
U 6 HOH C 21 621 98 HOH HOH . 
U 6 HOH C 22 622 96 HOH HOH . 
U 6 HOH C 23 623 64 HOH HOH . 
U 6 HOH C 24 624 83 HOH HOH . 
U 6 HOH C 25 625 37 HOH HOH . 
U 6 HOH C 26 626 51 HOH HOH . 
U 6 HOH C 27 627 100 HOH HOH . 
U 6 HOH C 28 628 31 HOH HOH . 
U 6 HOH C 29 629 62 HOH HOH . 
U 6 HOH C 30 630 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAC NXL . . . O 3 -45.415 -10.741 23.551 1 174.92 ? OAC NXL 501 C 1 
HETATM 2 C CAN NXL . . . O 3 -45.018 -11.335 24.56 1 167.06 ? CAN NXL 501 C 1 
HETATM 3 N N NXL . . . O 3 -45.991 -12.063 25.374 1 174.43 ? N NXL 501 C 1 
HETATM 4 C CAJ NXL . . . O 3 -45.51 -12.749 26.565 1 194.14 ? CAJ NXL 501 C 1 
HETATM 5 C CA NXL . . . O 3 -47.413 -12.119 25.027 1 158.16 ? CA NXL 501 C 1 
HETATM 6 C C NXL . . . O 3 -48.077 -10.798 25.385 1 132.44 ? C NXL 501 C 1 
HETATM 7 O O NXL . . . O 3 -47.649 -10.177 26.354 1 134.13 ? O NXL 501 C 1 
HETATM 8 N NAA NXL . . . O 3 -49.195 -10.286 24.597 1 112.36 ? NAA NXL 501 C 1 
HETATM 9 C CB NXL . . . O 3 -48.146 -13.277 25.696 1 163.8 ? CB NXL 501 C 1 
HETATM 10 C CAH NXL . . . O 3 -47.244 -14.461 25.878 1 199.72 ? CAH NXL 501 C 1 
HETATM 11 C CAO NXL . . . O 3 -45.954 -14.224 26.611 1 216.96 ? CAO NXL 501 C 1 
HETATM 12 N NAK NXL . . . O 3 -44.869 -15.158 26.194 1 233.88 ? NAK NXL 501 C 1 
HETATM 13 O OAL NXL . . . O 3 -44.484 -15.084 24.903 1 224.42 ? OAL NXL 501 C 1 
HETATM 14 S SAR NXL . . . O 3 -44.108 -16.335 24.148 1 193.58 ? SAR NXL 501 C 1 
HETATM 15 O OAD NXL . . . O 3 -44.19 -17.488 25.069 1 182.02 ? OAD NXL 501 C 1 
HETATM 16 O OAE NXL . . . O 3 -42.738 -16.157 23.624 1 171.03 ? OAE NXL 501 C 1 
HETATM 17 O OAG NXL . . . O 3 -45.023 -16.565 22.994 1 156.26 -1 OAG NXL 501 C 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           17 
#