data_6FJC # _model_server_result.job_id Nt8yhqY_2QlLAUOMCVooVQ _model_server_result.datetime_utc '2024-10-18 04:34:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":807}' # _entry.id 6FJC # _exptl.entry_id 6FJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FJC _cell.length_a 83.404 _cell.length_b 83.404 _cell.length_c 208.254 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,T 1 1 B,L,M,N,O,P,Q,R,S,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 60 A CYS 705 1_555 A SG CYS 66 A CYS 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 104 A CYS 749 1_555 A SG CYS 114 A CYS 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 B SG CYS 60 B CYS 705 1_555 B SG CYS 66 B CYS 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 104 B CYS 749 1_555 B SG CYS 114 B CYS 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 208 n n C1 C2 GOL sing 209 n n C1 H11 GOL sing 210 n n C1 H12 GOL sing 211 n n O1 HO1 GOL sing 212 n n C2 O2 GOL sing 213 n n C2 C3 GOL sing 214 n n C2 H2 GOL sing 215 n n O2 HO2 GOL sing 216 n n C3 O3 GOL sing 217 n n C3 H31 GOL sing 218 n n C3 H32 GOL sing 219 n n O3 HO3 GOL sing 220 n n # _atom_sites.entry_id 6FJC _atom_sites.fract_transf_matrix[1][1] 0.01199 _atom_sites.fract_transf_matrix[1][2] 0.006922 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004802 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 801 4 GOL GOL . D 2 GOL A 1 802 5 GOL GOL . E 2 GOL A 1 803 8 GOL GOL . F 2 GOL A 1 804 10 GOL GOL . G 2 GOL A 1 805 13 GOL GOL . H 2 GOL A 1 806 15 GOL GOL . I 2 GOL A 1 807 18 GOL GOL . J 2 GOL A 1 808 19 GOL GOL . K 3 4PT A 1 809 1 4PT 4PT . L 2 GOL B 1 801 6 GOL GOL . M 2 GOL B 1 802 7 GOL GOL . N 2 GOL B 1 803 9 GOL GOL . O 2 GOL B 1 804 11 GOL GOL . P 2 GOL B 1 805 14 GOL GOL . Q 2 GOL B 1 806 16 GOL GOL . R 2 GOL B 1 807 17 GOL GOL . S 4 SO4 B 1 808 1 SO4 SO4 . T 5 HOH A 1 901 74 HOH HOH . T 5 HOH A 2 902 59 HOH HOH . T 5 HOH A 3 903 76 HOH HOH . T 5 HOH A 4 904 98 HOH HOH . T 5 HOH A 5 905 33 HOH HOH . T 5 HOH A 6 906 70 HOH HOH . T 5 HOH A 7 907 105 HOH HOH . T 5 HOH A 8 908 90 HOH HOH . T 5 HOH A 9 909 69 HOH HOH . T 5 HOH A 10 910 55 HOH HOH . T 5 HOH A 11 911 100 HOH HOH . T 5 HOH A 12 912 16 HOH HOH . T 5 HOH A 13 913 7 HOH HOH . T 5 HOH A 14 914 85 HOH HOH . T 5 HOH A 15 915 118 HOH HOH . T 5 HOH A 16 916 110 HOH HOH . T 5 HOH A 17 917 111 HOH HOH . T 5 HOH A 18 918 29 HOH HOH . T 5 HOH A 19 919 63 HOH HOH . T 5 HOH A 20 920 120 HOH HOH . T 5 HOH A 21 921 21 HOH HOH . T 5 HOH A 22 922 47 HOH HOH . T 5 HOH A 23 923 82 HOH HOH . T 5 HOH A 24 924 44 HOH HOH . T 5 HOH A 25 925 109 HOH HOH . T 5 HOH A 26 926 25 HOH HOH . T 5 HOH A 27 927 2 HOH HOH . T 5 HOH A 28 928 24 HOH HOH . T 5 HOH A 29 929 93 HOH HOH . T 5 HOH A 30 930 10 HOH HOH . T 5 HOH A 31 931 19 HOH HOH . T 5 HOH A 32 932 3 HOH HOH . T 5 HOH A 33 933 31 HOH HOH . T 5 HOH A 34 934 58 HOH HOH . T 5 HOH A 35 935 65 HOH HOH . T 5 HOH A 36 936 48 HOH HOH . T 5 HOH A 37 937 115 HOH HOH . T 5 HOH A 38 938 56 HOH HOH . T 5 HOH A 39 939 22 HOH HOH . T 5 HOH A 40 940 66 HOH HOH . T 5 HOH A 41 941 26 HOH HOH . T 5 HOH A 42 942 91 HOH HOH . T 5 HOH A 43 943 75 HOH HOH . T 5 HOH A 44 944 101 HOH HOH . T 5 HOH A 45 945 18 HOH HOH . T 5 HOH A 46 946 92 HOH HOH . T 5 HOH A 47 947 99 HOH HOH . T 5 HOH A 48 948 116 HOH HOH . T 5 HOH A 49 949 114 HOH HOH . T 5 HOH A 50 950 95 HOH HOH . T 5 HOH A 51 951 94 HOH HOH . T 5 HOH A 52 952 80 HOH HOH . T 5 HOH A 53 953 117 HOH HOH . T 5 HOH A 54 954 46 HOH HOH . T 5 HOH A 55 955 86 HOH HOH . T 5 HOH A 56 956 81 HOH HOH . U 5 HOH B 1 901 12 HOH HOH . U 5 HOH B 2 902 28 HOH HOH . U 5 HOH B 3 903 38 HOH HOH . U 5 HOH B 4 904 103 HOH HOH . U 5 HOH B 5 905 23 HOH HOH . U 5 HOH B 6 906 8 HOH HOH . U 5 HOH B 7 907 4 HOH HOH . U 5 HOH B 8 908 96 HOH HOH . U 5 HOH B 9 909 39 HOH HOH . U 5 HOH B 10 910 102 HOH HOH . U 5 HOH B 11 911 35 HOH HOH . U 5 HOH B 12 912 53 HOH HOH . U 5 HOH B 13 913 42 HOH HOH . U 5 HOH B 14 914 64 HOH HOH . U 5 HOH B 15 915 119 HOH HOH . U 5 HOH B 16 916 5 HOH HOH . U 5 HOH B 17 917 43 HOH HOH . U 5 HOH B 18 918 60 HOH HOH . U 5 HOH B 19 919 34 HOH HOH . U 5 HOH B 20 920 9 HOH HOH . U 5 HOH B 21 921 108 HOH HOH . U 5 HOH B 22 922 6 HOH HOH . U 5 HOH B 23 923 87 HOH HOH . U 5 HOH B 24 924 37 HOH HOH . U 5 HOH B 25 925 52 HOH HOH . U 5 HOH B 26 926 40 HOH HOH . U 5 HOH B 27 927 113 HOH HOH . U 5 HOH B 28 928 77 HOH HOH . U 5 HOH B 29 929 30 HOH HOH . U 5 HOH B 30 930 1 HOH HOH . U 5 HOH B 31 931 106 HOH HOH . U 5 HOH B 32 932 73 HOH HOH . U 5 HOH B 33 933 71 HOH HOH . U 5 HOH B 34 934 84 HOH HOH . U 5 HOH B 35 935 79 HOH HOH . U 5 HOH B 36 936 83 HOH HOH . U 5 HOH B 37 937 97 HOH HOH . U 5 HOH B 38 938 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . R 2 -12.48 -15.96 15.919 1 98.83 ? C1 GOL 807 B 1 HETATM 2 O O1 GOL . . . R 2 -11.357 -16.784 16.153 1 105.55 ? O1 GOL 807 B 1 HETATM 3 C C2 GOL . . . R 2 -12.86 -15.936 14.44 1 72.02 ? C2 GOL 807 B 1 HETATM 4 O O2 GOL . . . R 2 -13.866 -14.967 14.232 1 59.07 ? O2 GOL 807 B 1 HETATM 5 C C3 GOL . . . R 2 -11.665 -15.603 13.555 1 70.79 ? C3 GOL 807 B 1 HETATM 6 O O3 GOL . . . R 2 -10.573 -16.435 13.872 1 82.48 ? O3 GOL 807 B 1 HETATM 7 H H11 GOL . . . R 2 -13.325 -16.326 16.503 1 118.6 ? H11 GOL 807 B 1 HETATM 8 H H12 GOL . . . R 2 -12.26 -14.946 16.252 1 118.6 ? H12 GOL 807 B 1 HETATM 9 H HO1 GOL . . . R 2 -11.1 -16.726 17.097 1 126.66 ? HO1 GOL 807 B 1 HETATM 10 H H2 GOL . . . R 2 -13.235 -16.921 14.161 1 86.43 ? H2 GOL 807 B 1 HETATM 11 H HO2 GOL . . . R 2 -13.514 -14.079 14.453 1 70.88 ? HO2 GOL 807 B 1 HETATM 12 H H31 GOL . . . R 2 -11.936 -15.739 12.508 1 84.95 ? H31 GOL 807 B 1 HETATM 13 H H32 GOL . . . R 2 -11.383 -14.56 13.698 1 84.95 ? H32 GOL 807 B 1 HETATM 14 H HO3 GOL . . . R 2 -10.904 -17.299 14.196 1 98.97 ? HO3 GOL 807 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #