data_6FKB # _model_server_result.job_id uTPX5SWfr9bXVD6__SYhdA _model_server_result.datetime_utc '2024-11-05 08:29:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fkb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6FKB # _exptl.entry_id 6FKB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FKB _cell.length_a 242.852 _cell.length_b 242.852 _cell.length_c 111.469 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FKB _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 2 1_555 A SG CYS 283 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 111 A CYS 110 1_555 A SG CYS 188 A CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A C ACE 1 A ACE 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A SG CYS 323 A CYS 322 1_555 B C1 PLM . A PLM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.73 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 437 n n C1 O2 PLM doub 438 n n C1 C2 PLM sing 439 n n O1 H PLM sing 440 n n C2 C3 PLM sing 441 n n C2 H21 PLM sing 442 n n C2 H22 PLM sing 443 n n C3 C4 PLM sing 444 n n C3 H31 PLM sing 445 n n C3 H32 PLM sing 446 n n C4 C5 PLM sing 447 n n C4 H41 PLM sing 448 n n C4 H42 PLM sing 449 n n C5 C6 PLM sing 450 n n C5 H51 PLM sing 451 n n C5 H52 PLM sing 452 n n C6 C7 PLM sing 453 n n C6 H61 PLM sing 454 n n C6 H62 PLM sing 455 n n C7 C8 PLM sing 456 n n C7 H71 PLM sing 457 n n C7 H72 PLM sing 458 n n C8 C9 PLM sing 459 n n C8 H81 PLM sing 460 n n C8 H82 PLM sing 461 n n C9 CA PLM sing 462 n n C9 H91 PLM sing 463 n n C9 H92 PLM sing 464 n n CA CB PLM sing 465 n n CA HA1 PLM sing 466 n n CA HA2 PLM sing 467 n n CB CC PLM sing 468 n n CB HB1 PLM sing 469 n n CB HB2 PLM sing 470 n n CC CD PLM sing 471 n n CC HC1 PLM sing 472 n n CC HC2 PLM sing 473 n n CD CE PLM sing 474 n n CD HD1 PLM sing 475 n n CD HD2 PLM sing 476 n n CE CF PLM sing 477 n n CE HE1 PLM sing 478 n n CE HE2 PLM sing 479 n n CF CG PLM sing 480 n n CF HF1 PLM sing 481 n n CF HF2 PLM sing 482 n n CG HG1 PLM sing 483 n n CG HG2 PLM sing 484 n n CG HG3 PLM sing 485 n n # _atom_sites.entry_id 6FKB _atom_sites.fract_transf_matrix[1][1] 0.004118 _atom_sites.fract_transf_matrix[1][2] 0.002377 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 401 322 PLM P1L . C 3 NAG A 1 402 400 NAG NAG . D 3 NAG A 1 403 401 NAG NAG . E 4 BMA A 1 404 402 BMA BMA . F 5 MAN A 1 405 403 MAN MAN . G 5 MAN A 1 406 404 MAN MAN . H 6 BOG A 1 407 500 BOG BOG . I 6 BOG A 1 408 501 BOG BOG . J 6 BOG A 1 409 502 BOG BOG . K 6 BOG A 1 410 503 BOG BOG . L 6 BOG A 1 411 504 BOG BOG . M 7 DLH A 1 412 600 DLH L0R . N 8 HOH A 1 1000 1000 HOH HOH . N 8 HOH A 2 1001 1001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 -221.265 14.944 56.801 1 131.64 ? C1 PLM 401 A 1 HETATM 2 O O2 PLM . . . B 2 -222.021 15.601 56.082 1 114 ? O2 PLM 401 A 1 HETATM 3 C C2 PLM . . . B 2 -219.899 15.409 57.209 1 120.87 ? C2 PLM 401 A 1 HETATM 4 C C3 PLM . . . B 2 -219.751 16.913 57.114 1 115.36 ? C3 PLM 401 A 1 HETATM 5 C C4 PLM . . . B 2 -218.446 17.397 57.709 1 105.68 ? C4 PLM 401 A 1 HETATM 6 C C5 PLM . . . B 2 -218.474 18.896 57.925 1 96.39 ? C5 PLM 401 A 1 HETATM 7 C C6 PLM . . . B 2 -219.511 19.275 58.961 1 85.2 ? C6 PLM 401 A 1 HETATM 8 C C7 PLM . . . B 2 -219.261 20.658 59.527 1 76.47 ? C7 PLM 401 A 1 HETATM 9 C C8 PLM . . . B 2 -219.584 21.744 58.523 1 77.94 ? C8 PLM 401 A 1 HETATM 10 C C9 PLM . . . B 2 -219.379 23.119 59.127 1 78.3 ? C9 PLM 401 A 1 HETATM 11 C CA PLM . . . B 2 -219.908 24.208 58.217 1 80.29 ? CA PLM 401 A 1 HETATM 12 C CB PLM . . . B 2 -219.998 25.535 58.941 1 78.02 ? CB PLM 401 A 1 HETATM 13 C CC PLM . . . B 2 -218.796 26.409 58.65 1 75.37 ? CC PLM 401 A 1 HETATM 14 C CD PLM . . . B 2 -218.94 27.768 59.301 1 80.4 ? CD PLM 401 A 1 HETATM 15 C CE PLM . . . B 2 -217.916 28.751 58.775 1 75.32 ? CE PLM 401 A 1 HETATM 16 C CF PLM . . . B 2 -218.418 30.174 58.905 1 73.32 ? CF PLM 401 A 1 HETATM 17 C CG PLM . . . B 2 -217.475 31.163 58.27 1 67.19 ? CG PLM 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 17 #