data_6FKV # _model_server_result.job_id 7twud8fVTNnh1Q0ZHoo9-w _model_server_result.datetime_utc '2024-12-21 18:38:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fkv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":704}' # _entry.id 6FKV # _exptl.entry_id 6FKV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FKV _cell.length_a 105.19 _cell.length_b 105.19 _cell.length_c 314.57 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FKV _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 354 n n C C2 TRS sing 355 n n C C3 TRS sing 356 n n C N TRS sing 357 n n C1 O1 TRS sing 358 n n C1 H11 TRS sing 359 n n C1 H12 TRS sing 360 n n C2 O2 TRS sing 361 n n C2 H21 TRS sing 362 n n C2 H22 TRS sing 363 n n C3 O3 TRS sing 364 n n C3 H31 TRS sing 365 n n C3 H32 TRS sing 366 n n N HN1 TRS sing 367 n n N HN2 TRS sing 368 n n N HN3 TRS sing 369 n n O1 HO1 TRS sing 370 n n O2 HO2 TRS sing 371 n n O3 HO3 TRS sing 372 n n # _atom_sites.entry_id 6FKV _atom_sites.fract_transf_matrix[1][1] 0.009507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003179 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 601 601 PEG PEG . D 2 PEG A 1 602 801 PEG PEG . E 3 SO4 A 1 603 1 SO4 SO4 . F 3 SO4 A 1 604 3 SO4 SO4 . G 3 SO4 A 1 605 4 SO4 SO4 . H 3 SO4 A 1 606 5 SO4 SO4 . I 4 CL A 1 607 1 CL CL . J 4 CL A 1 608 4 CL CL . K 4 CL A 1 609 5 CL CL . L 4 CL A 1 610 6 CL CL . M 2 PEG B 1 701 701 PEG PEG . N 2 PEG B 1 702 601 PEG PEG . O 2 PEG B 1 703 701 PEG PEG . P 5 TRS B 1 704 801 TRS TRS . Q 3 SO4 B 1 705 2 SO4 SO4 . R 3 SO4 B 1 706 6 SO4 SO4 . S 6 HOH A 1 701 18 HOH HOH . S 6 HOH A 2 702 5 HOH HOH . S 6 HOH A 3 703 16 HOH HOH . S 6 HOH A 4 704 8 HOH HOH . S 6 HOH A 5 705 2 HOH HOH . S 6 HOH A 6 706 6 HOH HOH . S 6 HOH A 7 707 9 HOH HOH . T 6 HOH B 1 801 1 HOH HOH . T 6 HOH B 2 802 17 HOH HOH . T 6 HOH B 3 803 14 HOH HOH . T 6 HOH B 4 804 10 HOH HOH . T 6 HOH B 5 805 3 HOH HOH . T 6 HOH B 6 806 11 HOH HOH . T 6 HOH B 7 807 7 HOH HOH . T 6 HOH B 8 808 15 HOH HOH . T 6 HOH B 9 809 13 HOH HOH . T 6 HOH B 10 810 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . P 5 2.588 -22.254 -14.31 1 89.49 ? C TRS 704 B 1 HETATM 2 C C1 TRS . . . P 5 2.809 -21.117 -15.328 1 74.83 ? C1 TRS 704 B 1 HETATM 3 C C2 TRS . . . P 5 1.397 -22.057 -13.348 1 91.87 ? C2 TRS 704 B 1 HETATM 4 C C3 TRS . . . P 5 3.869 -22.506 -13.53 1 93.48 ? C3 TRS 704 B 1 HETATM 5 N N TRS . . . P 5 2.316 -23.498 -15.068 1 92.61 ? N TRS 704 B 1 HETATM 6 O O1 TRS . . . P 5 3.216 -19.854 -14.772 1 62.54 ? O1 TRS 704 B 1 HETATM 7 O O2 TRS . . . P 5 0.127 -22.062 -14.027 1 85.3 ? O2 TRS 704 B 1 HETATM 8 O O3 TRS . . . P 5 4.503 -21.241 -13.412 1 106.79 ? O3 TRS 704 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #