data_6FLG # _model_server_result.job_id vt879_QsfsuIOZE4XkKZXQ _model_server_result.datetime_utc '2024-11-24 13:49:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6flg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 6FLG # _exptl.entry_id 6FLG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FLG _cell.length_a 87 _cell.length_b 87 _cell.length_c 316.88 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FLG _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1 B,F,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 253 A CYS 274 1_555 B SG CYS 253 B CYS 274 12_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 C C GZB 1 C GZB 1 1_555 C N VAL 2 C VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 C C LEU 3 C LEU 3 1_555 C N DQK 4 C DQK 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 C C DQK 4 C DQK 4 1_555 C N GLU 5 C GLU 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A SG CYS 141 A CYS 162 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 A SG CYS 144 A CYS 165 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc3 A SG CYS 182 A CYS 203 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc4 A SG CYS 187 A CYS 208 1_555 D ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc5 B SG CYS 141 B CYS 162 1_555 H ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc6 B SG CYS 144 B CYS 165 1_555 H ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc7 B SG CYS 182 B CYS 203 1_555 H ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc8 B SG CYS 187 B CYS 208 1_555 H ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 153 n n N1 C6 EPE sing 154 n n N1 C9 EPE sing 155 n n C2 C3 EPE sing 156 n n C2 H21 EPE sing 157 n n C2 H22 EPE sing 158 n n C3 N4 EPE sing 159 n n C3 H31 EPE sing 160 n n C3 H32 EPE sing 161 n n N4 C5 EPE sing 162 n n N4 C7 EPE sing 163 n n C5 C6 EPE sing 164 n n C5 H51 EPE sing 165 n n C5 H52 EPE sing 166 n n C6 H61 EPE sing 167 n n C6 H62 EPE sing 168 n n C7 C8 EPE sing 169 n n C7 H71 EPE sing 170 n n C7 H72 EPE sing 171 n n C8 O8 EPE sing 172 n n C8 H81 EPE sing 173 n n C8 H82 EPE sing 174 n n O8 HO8 EPE sing 175 n n C9 C10 EPE sing 176 n n C9 H91 EPE sing 177 n n C9 H92 EPE sing 178 n n C10 S EPE sing 179 n n C10 H101 EPE sing 180 n n C10 H102 EPE sing 181 n n S O1S EPE doub 182 n n S O2S EPE doub 183 n n S O3S EPE sing 184 n n O3S HOS3 EPE sing 185 n n # _atom_sites.entry_id 6FLG _atom_sites.fract_transf_matrix[1][1] 0.011494 _atom_sites.fract_transf_matrix[1][2] 0.006636 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013272 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN A 1 401 1 ZN ZN . E 4 EDO A 1 402 1 EDO EDO . F 5 DMS B 1 401 1 DMS DMS . G 6 EPE B 1 402 1 EPE EPE . H 3 ZN B 1 403 2 ZN ZN . I 4 EDO B 1 404 2 EDO EDO . J 4 EDO B 1 405 3 EDO EDO . K 7 HOH A 1 501 37 HOH HOH . K 7 HOH A 2 502 57 HOH HOH . K 7 HOH A 3 503 64 HOH HOH . K 7 HOH A 4 504 14 HOH HOH . K 7 HOH A 5 505 33 HOH HOH . K 7 HOH A 6 506 18 HOH HOH . K 7 HOH A 7 507 23 HOH HOH . K 7 HOH A 8 508 31 HOH HOH . K 7 HOH A 9 509 2 HOH HOH . K 7 HOH A 10 510 69 HOH HOH . K 7 HOH A 11 511 75 HOH HOH . K 7 HOH A 12 512 21 HOH HOH . K 7 HOH A 13 513 15 HOH HOH . K 7 HOH A 14 514 54 HOH HOH . K 7 HOH A 15 515 34 HOH HOH . K 7 HOH A 16 516 42 HOH HOH . K 7 HOH A 17 517 12 HOH HOH . K 7 HOH A 18 518 35 HOH HOH . K 7 HOH A 19 519 59 HOH HOH . K 7 HOH A 20 520 28 HOH HOH . K 7 HOH A 21 521 46 HOH HOH . K 7 HOH A 22 522 4 HOH HOH . K 7 HOH A 23 523 17 HOH HOH . K 7 HOH A 24 524 49 HOH HOH . K 7 HOH A 25 525 9 HOH HOH . K 7 HOH A 26 526 13 HOH HOH . K 7 HOH A 27 527 61 HOH HOH . K 7 HOH A 28 528 55 HOH HOH . K 7 HOH A 29 529 60 HOH HOH . K 7 HOH A 30 530 30 HOH HOH . K 7 HOH A 31 531 56 HOH HOH . K 7 HOH A 32 532 1 HOH HOH . K 7 HOH A 33 533 11 HOH HOH . K 7 HOH A 34 534 19 HOH HOH . K 7 HOH A 35 535 48 HOH HOH . K 7 HOH A 36 536 40 HOH HOH . K 7 HOH A 37 537 50 HOH HOH . L 7 HOH B 1 501 22 HOH HOH . L 7 HOH B 2 502 68 HOH HOH . L 7 HOH B 3 503 10 HOH HOH . L 7 HOH B 4 504 63 HOH HOH . L 7 HOH B 5 505 43 HOH HOH . L 7 HOH B 6 506 3 HOH HOH . L 7 HOH B 7 507 7 HOH HOH . L 7 HOH B 8 508 27 HOH HOH . L 7 HOH B 9 509 71 HOH HOH . L 7 HOH B 10 510 53 HOH HOH . L 7 HOH B 11 511 24 HOH HOH . L 7 HOH B 12 512 45 HOH HOH . L 7 HOH B 13 513 16 HOH HOH . L 7 HOH B 14 514 25 HOH HOH . L 7 HOH B 15 515 52 HOH HOH . L 7 HOH B 16 516 58 HOH HOH . L 7 HOH B 17 517 70 HOH HOH . L 7 HOH B 18 518 44 HOH HOH . L 7 HOH B 19 519 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . G 6 -9.275 26.047 -33.326 1 83.7 ? N1 EPE 402 B 1 HETATM 2 C C2 EPE . . . G 6 -8.416 27.229 -33.49 1 86.06 ? C2 EPE 402 B 1 HETATM 3 C C3 EPE . . . G 6 -9.258 28.394 -34.016 1 84.56 ? C3 EPE 402 B 1 HETATM 4 N N4 EPE . . . G 6 -9.973 28.06 -35.252 1 81.51 ? N4 EPE 402 B 1 HETATM 5 C C5 EPE . . . G 6 -10.786 26.875 -35.002 1 83.53 ? C5 EPE 402 B 1 HETATM 6 C C6 EPE . . . G 6 -9.864 25.727 -34.628 1 84.25 ? C6 EPE 402 B 1 HETATM 7 C C7 EPE . . . G 6 -10.819 29.189 -35.687 1 84.72 ? C7 EPE 402 B 1 HETATM 8 C C8 EPE . . . G 6 -10.004 30.139 -36.561 1 89.17 ? C8 EPE 402 B 1 HETATM 9 O O8 EPE . . . G 6 -10.672 30.319 -37.813 1 93.75 ? O8 EPE 402 B 1 HETATM 10 C C9 EPE . . . G 6 -8.551 24.878 -32.808 1 83.43 ? C9 EPE 402 B 1 HETATM 11 C C10 EPE . . . G 6 -9.559 24.072 -31.992 1 83.62 ? C10 EPE 402 B 1 HETATM 12 S S EPE . . . G 6 -8.842 22.906 -31.054 1 83.92 ? S EPE 402 B 1 HETATM 13 O O1S EPE . . . G 6 -7.796 23.55 -30.227 1 89.33 ? O1S EPE 402 B 1 HETATM 14 O O2S EPE . . . G 6 -8.222 21.837 -31.884 1 72.11 ? O2S EPE 402 B 1 HETATM 15 O O3S EPE . . . G 6 -9.894 22.361 -30.165 1 78.95 ? O3S EPE 402 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #