data_6FMD
#
_model_server_result.job_id            2ryouby6K5uUJcnKhj66oA 
_model_server_result.datetime_utc      '2024-11-26 21:10:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fmd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":413}' 
#
_entry.id    6FMD 
#
_exptl.entry_id    6FMD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FMD 
_cell.length_a            90.441 
_cell.length_b            90.441 
_cell.length_c            122.446 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FMD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 N N N 
? 7 O N N 
? 7 P N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 219 n n 
C1 C2 GOL sing 220 n n 
C1 H11 GOL sing 221 n n 
C1 H12 GOL sing 222 n n 
O1 HO1 GOL sing 223 n n 
C2 O2 GOL sing 224 n n 
C2 C3 GOL sing 225 n n 
C2 H2 GOL sing 226 n n 
O2 HO2 GOL sing 227 n n 
C3 O3 GOL sing 228 n n 
C3 H31 GOL sing 229 n n 
C3 H32 GOL sing 230 n n 
O3 HO3 GOL sing 231 n n 
#
_atom_sites.entry_id                     6FMD 
_atom_sites.fract_transf_matrix[1][1]    0.011057 
_atom_sites.fract_transf_matrix[1][2]    0.006384 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012767 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008167 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DUH A 1 401 1 DUH 433 . 
C 3 CL A 1 402 1 CL CL . 
D 3 CL A 1 403 2 CL CL . 
E 4 FMN A 1 404 402 FMN FMN . 
F 5 ACT A 1 405 1 ACT ACT . 
G 5 ACT A 1 406 2 ACT ACT . 
H 5 ACT A 1 407 3 ACT ACT . 
I 5 ACT A 1 408 4 ACT ACT . 
J 5 ACT A 1 409 5 ACT ACT . 
K 5 ACT A 1 410 6 ACT ACT . 
L 6 ORO A 1 411 403 ORO ORO . 
M 7 GOL A 1 412 1 GOL GOL . 
N 7 GOL A 1 413 2 GOL GOL . 
O 7 GOL A 1 414 3 GOL GOL . 
P 7 GOL A 1 415 4 GOL GOL . 
Q 8 PGE A 1 416 0 PGE PGE . 
R 8 PGE A 1 417 1 PGE PGE . 
S 8 PGE A 1 418 2 PGE PGE . 
T 8 PGE A 1 419 3 PGE PGE . 
U 8 PGE A 1 420 5 PGE PGE . 
V 8 PGE A 1 421 7 PGE PGE . 
W 9 HOH A 1 501 57 HOH HOH . 
W 9 HOH A 2 502 88 HOH HOH . 
W 9 HOH A 3 503 62 HOH HOH . 
W 9 HOH A 4 504 95 HOH HOH . 
W 9 HOH A 5 505 131 HOH HOH . 
W 9 HOH A 6 506 175 HOH HOH . 
W 9 HOH A 7 507 23 HOH HOH . 
W 9 HOH A 8 508 83 HOH HOH . 
W 9 HOH A 9 509 39 HOH HOH . 
W 9 HOH A 10 510 58 HOH HOH . 
W 9 HOH A 11 511 93 HOH HOH . 
W 9 HOH A 12 512 79 HOH HOH . 
W 9 HOH A 13 513 63 HOH HOH . 
W 9 HOH A 14 514 81 HOH HOH . 
W 9 HOH A 15 515 112 HOH HOH . 
W 9 HOH A 16 516 9 HOH HOH . 
W 9 HOH A 17 517 72 HOH HOH . 
W 9 HOH A 18 518 22 HOH HOH . 
W 9 HOH A 19 519 103 HOH HOH . 
W 9 HOH A 20 520 89 HOH HOH . 
W 9 HOH A 21 521 104 HOH HOH . 
W 9 HOH A 22 522 2 HOH HOH . 
W 9 HOH A 23 523 130 HOH HOH . 
W 9 HOH A 24 524 64 HOH HOH . 
W 9 HOH A 25 525 54 HOH HOH . 
W 9 HOH A 26 526 148 HOH HOH . 
W 9 HOH A 27 527 156 HOH HOH . 
W 9 HOH A 28 528 14 HOH HOH . 
W 9 HOH A 29 529 136 HOH HOH . 
W 9 HOH A 30 530 19 HOH HOH . 
W 9 HOH A 31 531 12 HOH HOH . 
W 9 HOH A 32 532 6 HOH HOH . 
W 9 HOH A 33 533 5 HOH HOH . 
W 9 HOH A 34 534 164 HOH HOH . 
W 9 HOH A 35 535 110 HOH HOH . 
W 9 HOH A 36 536 16 HOH HOH . 
W 9 HOH A 37 537 158 HOH HOH . 
W 9 HOH A 38 538 66 HOH HOH . 
W 9 HOH A 39 539 80 HOH HOH . 
W 9 HOH A 40 540 43 HOH HOH . 
W 9 HOH A 41 541 144 HOH HOH . 
W 9 HOH A 42 542 46 HOH HOH . 
W 9 HOH A 43 543 29 HOH HOH . 
W 9 HOH A 44 544 15 HOH HOH . 
W 9 HOH A 45 545 21 HOH HOH . 
W 9 HOH A 46 546 162 HOH HOH . 
W 9 HOH A 47 547 150 HOH HOH . 
W 9 HOH A 48 548 74 HOH HOH . 
W 9 HOH A 49 549 69 HOH HOH . 
W 9 HOH A 50 550 13 HOH HOH . 
W 9 HOH A 51 551 152 HOH HOH . 
W 9 HOH A 52 552 18 HOH HOH . 
W 9 HOH A 53 553 48 HOH HOH . 
W 9 HOH A 54 554 38 HOH HOH . 
W 9 HOH A 55 555 50 HOH HOH . 
W 9 HOH A 56 556 100 HOH HOH . 
W 9 HOH A 57 557 76 HOH HOH . 
W 9 HOH A 58 558 27 HOH HOH . 
W 9 HOH A 59 559 51 HOH HOH . 
W 9 HOH A 60 560 7 HOH HOH . 
W 9 HOH A 61 561 4 HOH HOH . 
W 9 HOH A 62 562 31 HOH HOH . 
W 9 HOH A 63 563 121 HOH HOH . 
W 9 HOH A 64 564 24 HOH HOH . 
W 9 HOH A 65 565 61 HOH HOH . 
W 9 HOH A 66 566 20 HOH HOH . 
W 9 HOH A 67 567 85 HOH HOH . 
W 9 HOH A 68 568 33 HOH HOH . 
W 9 HOH A 69 569 161 HOH HOH . 
W 9 HOH A 70 570 101 HOH HOH . 
W 9 HOH A 71 571 92 HOH HOH . 
W 9 HOH A 72 572 155 HOH HOH . 
W 9 HOH A 73 573 65 HOH HOH . 
W 9 HOH A 74 574 106 HOH HOH . 
W 9 HOH A 75 575 147 HOH HOH . 
W 9 HOH A 76 576 75 HOH HOH . 
W 9 HOH A 77 577 32 HOH HOH . 
W 9 HOH A 78 578 78 HOH HOH . 
W 9 HOH A 79 579 59 HOH HOH . 
W 9 HOH A 80 580 36 HOH HOH . 
W 9 HOH A 81 581 55 HOH HOH . 
W 9 HOH A 82 582 159 HOH HOH . 
W 9 HOH A 83 583 171 HOH HOH . 
W 9 HOH A 84 584 34 HOH HOH . 
W 9 HOH A 85 585 160 HOH HOH . 
W 9 HOH A 86 586 45 HOH HOH . 
W 9 HOH A 87 587 52 HOH HOH . 
W 9 HOH A 88 588 154 HOH HOH . 
W 9 HOH A 89 589 53 HOH HOH . 
W 9 HOH A 90 590 124 HOH HOH . 
W 9 HOH A 91 591 119 HOH HOH . 
W 9 HOH A 92 592 26 HOH HOH . 
W 9 HOH A 93 593 49 HOH HOH . 
W 9 HOH A 94 594 30 HOH HOH . 
W 9 HOH A 95 595 167 HOH HOH . 
W 9 HOH A 96 596 151 HOH HOH . 
W 9 HOH A 97 597 25 HOH HOH . 
W 9 HOH A 98 598 11 HOH HOH . 
W 9 HOH A 99 599 17 HOH HOH . 
W 9 HOH A 100 600 1 HOH HOH . 
W 9 HOH A 101 601 47 HOH HOH . 
W 9 HOH A 102 602 145 HOH HOH . 
W 9 HOH A 103 603 132 HOH HOH . 
W 9 HOH A 104 604 90 HOH HOH . 
W 9 HOH A 105 605 8 HOH HOH . 
W 9 HOH A 106 606 87 HOH HOH . 
W 9 HOH A 107 607 44 HOH HOH . 
W 9 HOH A 108 608 68 HOH HOH . 
W 9 HOH A 109 609 73 HOH HOH . 
W 9 HOH A 110 610 99 HOH HOH . 
W 9 HOH A 111 611 41 HOH HOH . 
W 9 HOH A 112 612 149 HOH HOH . 
W 9 HOH A 113 613 94 HOH HOH . 
W 9 HOH A 114 614 35 HOH HOH . 
W 9 HOH A 115 615 37 HOH HOH . 
W 9 HOH A 116 616 141 HOH HOH . 
W 9 HOH A 117 617 102 HOH HOH . 
W 9 HOH A 118 618 40 HOH HOH . 
W 9 HOH A 119 619 157 HOH HOH . 
W 9 HOH A 120 620 3 HOH HOH . 
W 9 HOH A 121 621 169 HOH HOH . 
W 9 HOH A 122 622 28 HOH HOH . 
W 9 HOH A 123 623 82 HOH HOH . 
W 9 HOH A 124 624 10 HOH HOH . 
W 9 HOH A 125 625 42 HOH HOH . 
W 9 HOH A 126 626 97 HOH HOH . 
W 9 HOH A 127 627 122 HOH HOH . 
W 9 HOH A 128 628 70 HOH HOH . 
W 9 HOH A 129 629 142 HOH HOH . 
W 9 HOH A 130 630 128 HOH HOH . 
W 9 HOH A 131 631 168 HOH HOH . 
W 9 HOH A 132 632 84 HOH HOH . 
W 9 HOH A 133 633 98 HOH HOH . 
W 9 HOH A 134 634 120 HOH HOH . 
W 9 HOH A 135 635 113 HOH HOH . 
W 9 HOH A 136 636 176 HOH HOH . 
W 9 HOH A 137 637 91 HOH HOH . 
W 9 HOH A 138 638 166 HOH HOH . 
W 9 HOH A 139 639 116 HOH HOH . 
W 9 HOH A 140 640 56 HOH HOH . 
W 9 HOH A 141 641 60 HOH HOH . 
W 9 HOH A 142 642 114 HOH HOH . 
W 9 HOH A 143 643 96 HOH HOH . 
W 9 HOH A 144 644 77 HOH HOH . 
W 9 HOH A 145 645 86 HOH HOH . 
W 9 HOH A 146 646 172 HOH HOH . 
W 9 HOH A 147 647 118 HOH HOH . 
W 9 HOH A 148 648 170 HOH HOH . 
W 9 HOH A 149 649 135 HOH HOH . 
W 9 HOH A 150 650 67 HOH HOH . 
W 9 HOH A 151 651 117 HOH HOH . 
W 9 HOH A 152 652 153 HOH HOH . 
W 9 HOH A 153 653 71 HOH HOH . 
W 9 HOH A 154 654 173 HOH HOH . 
W 9 HOH A 155 655 174 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . N 7 24.596 2.805 -11.091 1 56.9 ? C1 GOL 413 A 1 
HETATM 2 O O1 GOL . . . N 7 24.369 1.834 -10.041 1 65.52 ? O1 GOL 413 A 1 
HETATM 3 C C2 GOL . . . N 7 25.239 2.207 -12.362 1 60.56 ? C2 GOL 413 A 1 
HETATM 4 O O2 GOL . . . N 7 24.438 2.562 -13.482 1 68.49 ? O2 GOL 413 A 1 
HETATM 5 C C3 GOL . . . N 7 26.654 2.707 -12.692 1 56.05 ? C3 GOL 413 A 1 
HETATM 6 O O3 GOL . . . N 7 27.078 2.449 -14.039 1 56.92 ? O3 GOL 413 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#