data_6FMR
#
_model_server_result.job_id            Y7bYnm6hvB85x8DnW6SC5w 
_model_server_result.datetime_utc      '2024-11-05 00:00:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fmr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":512}' 
#
_entry.id    6FMR 
#
_exptl.entry_id    6FMR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              314.46 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FMR 
_cell.length_a            103.68 
_cell.length_b            110.89 
_cell.length_c            110.38 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FMR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 19 A PHE 19 1_555 A N MSE 20 A MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 20 A MSE 20 1_555 A N THR 21 A THR 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 A C GLU 22 A GLU 22 1_555 A N MSE 23 A MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 A C MSE 23 A MSE 23 1_555 A N TRP 24 A TRP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 A C GLY 31 A GLY 31 1_555 A N MSE 32 A MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale6 A C MSE 32 A MSE 32 1_555 A N ARG 33 A ARG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale7 A C TYR 39 A TYR 39 1_555 A N MSE 40 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 A C MSE 40 A MSE 40 1_555 A N TRP 41 A TRP 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale9 A C ILE 59 A ILE 59 1_555 A N MSE 60 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale10 A C MSE 60 A MSE 60 1_555 A N ALA 61 A ALA 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale11 A C SER 65 A SER 65 1_555 A N MSE 66 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale12 A C MSE 66 A MSE 66 1_555 A N VAL 67 A VAL 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale13 A C ILE 95 A ILE 95 1_555 A N MSE 96 A MSE 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale14 A C MSE 96 A MSE 96 1_555 A N LEU 97 A LEU 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale15 A C GLY 185 A GLY 185 1_555 A N MSE 186 A MSE 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale16 A C MSE 186 A MSE 186 1_555 A N PHE 187 A PHE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale17 A C VAL 237 A VAL 237 1_555 A N MSE 238 A MSE 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale18 A C MSE 238 A MSE 238 1_555 A N ASN 239 A ASN 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale19 A C TRP 267 A TRP 267 1_555 A N MSE 268 A MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 A C MSE 268 A MSE 268 1_555 A N ILE 269 A ILE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale21 A C ILE 332 A ILE 332 1_555 A N MSE 333 A MSE 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale22 A C MSE 333 A MSE 333 1_555 A N LEU 334 A LEU 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale23 A C LEU 361 A LEU 361 1_555 A N MSE 362 A MSE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale24 A C MSE 362 A MSE 362 1_555 A N PHE 363 A PHE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale25 A C LEU 370 A LEU 370 1_555 A N MSE 371 A MSE 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale26 A C MSE 371 A MSE 371 1_555 A N ALA 372 A ALA 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale27 A C GLU 400 A GLU 400 1_555 A N MSE 401 A MSE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale28 A C MSE 401 A MSE 401 1_555 A N LEU 402 A LEU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale29 A C GLN 422 A GLN 422 1_555 A N MSE 423 A MSE 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale30 A C MSE 423 A MSE 423 1_555 A N MSE 424 A MSE 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale31 A C MSE 424 A MSE 424 1_555 A N SER 425 A SER 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale32 A C SER 425 A SER 425 1_555 A N MSE 426 A MSE 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale33 A C MSE 426 A MSE 426 1_555 A N TRP 427 A TRP 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale34 A C LEU 478 A LEU 478 1_555 A N MSE 479 A MSE 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
#
_chem_comp.formula           'C18 H34 O4' 
_chem_comp.formula_weight    314.46 
_chem_comp.id                78M 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '7.8 MONOACYLGLYCEROL' 
#
_atom_sites.entry_id                     6FMR 
_atom_sites.fract_transf_matrix[1][1]    0.009645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009018 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00906 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 78M A 1 501 3 78M 78M . 
C 2 78M A 1 502 4 78M 78M . 
D 2 78M A 1 503 5 78M 78M . 
E 2 78M A 1 504 7 78M 78M . 
F 2 78M A 1 505 14 78M 78M . 
G 2 78M A 1 506 15 78M 78M . 
H 2 78M A 1 507 16 78M 78M . 
I 3 PO4 A 1 508 19 PO4 PO4 . 
J 2 78M A 1 509 1 78M 78M . 
K 2 78M A 1 510 1 78M 78M . 
L 2 78M A 1 511 2 78M 78M . 
M 2 78M A 1 512 3 78M 78M . 
N 2 78M A 1 513 4 78M 78M . 
O 2 78M A 1 514 5 78M 78M . 
P 2 78M A 1 515 6 78M 78M . 
Q 4 HOH A 1 601 28 HOH HOH . 
Q 4 HOH A 2 602 35 HOH HOH . 
Q 4 HOH A 3 603 20 HOH HOH . 
Q 4 HOH A 4 604 4 HOH HOH . 
Q 4 HOH A 5 605 13 HOH HOH . 
Q 4 HOH A 6 606 27 HOH HOH . 
Q 4 HOH A 7 607 31 HOH HOH . 
Q 4 HOH A 8 608 26 HOH HOH . 
Q 4 HOH A 9 609 38 HOH HOH . 
Q 4 HOH A 10 610 11 HOH HOH . 
Q 4 HOH A 11 611 24 HOH HOH . 
Q 4 HOH A 12 612 2 HOH HOH . 
Q 4 HOH A 13 613 25 HOH HOH . 
Q 4 HOH A 14 614 29 HOH HOH . 
Q 4 HOH A 15 615 9 HOH HOH . 
Q 4 HOH A 16 616 22 HOH HOH . 
Q 4 HOH A 17 617 23 HOH HOH . 
Q 4 HOH A 18 618 18 HOH HOH . 
Q 4 HOH A 19 619 34 HOH HOH . 
Q 4 HOH A 20 620 1 HOH HOH . 
Q 4 HOH A 21 621 8 HOH HOH . 
Q 4 HOH A 22 622 30 HOH HOH . 
Q 4 HOH A 23 623 3 HOH HOH . 
Q 4 HOH A 24 624 7 HOH HOH . 
Q 4 HOH A 25 625 10 HOH HOH . 
Q 4 HOH A 26 626 21 HOH HOH . 
Q 4 HOH A 27 627 33 HOH HOH . 
Q 4 HOH A 28 628 37 HOH HOH . 
Q 4 HOH A 29 629 14 HOH HOH . 
Q 4 HOH A 30 630 39 HOH HOH . 
Q 4 HOH A 31 631 17 HOH HOH . 
Q 4 HOH A 32 632 12 HOH HOH . 
Q 4 HOH A 33 633 19 HOH HOH . 
Q 4 HOH A 34 634 5 HOH HOH . 
Q 4 HOH A 35 635 32 HOH HOH . 
Q 4 HOH A 36 636 15 HOH HOH . 
Q 4 HOH A 37 637 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O21 78M . . . M 2 82.252 94.703 -10.439 1 70.14 ? O21 78M 512 A 1 
HETATM 2 C C20 78M . . . M 2 82.719 94.178 -9.227 1 70.15 ? C20 78M 512 A 1 
HETATM 3 C C18 78M . . . M 2 84.215 94.454 -9.097 1 66.88 ? C18 78M 512 A 1 
HETATM 4 O O19 78M . . . M 2 84.843 94.191 -10.32 1 71.03 ? O19 78M 512 A 1 
HETATM 5 C C17 78M . . . M 2 84.808 93.554 -8.015 1 68.53 ? C17 78M 512 A 1 
HETATM 6 O O2 78M . . . M 2 84.168 93.804 -6.795 1 70.62 ? O2 78M 512 A 1 
HETATM 7 C C1 78M . . . M 2 84.825 93.264 -5.684 1 66.47 ? C1 78M 512 A 1 
HETATM 8 O O1 78M . . . M 2 85.669 92.446 -5.832 1 67.49 ? O1 78M 512 A 1 
HETATM 9 C C2 78M . . . M 2 84.454 93.732 -4.279 1 64.74 ? C2 78M 512 A 1 
HETATM 10 C C3 78M . . . M 2 84.951 92.715 -3.255 1 65.2 ? C3 78M 512 A 1 
HETATM 11 C C4 78M . . . M 2 84.259 92.972 -1.919 1 66.35 ? C4 78M 512 A 1 
HETATM 12 C C5 78M . . . M 2 85.295 93.368 -0.871 1 68.23 ? C5 78M 512 A 1 
HETATM 13 C C6 78M . . . M 2 84.602 94.142 0.248 1 63.95 ? C6 78M 512 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#