data_6FMR # _model_server_result.job_id mlYiykBRamvFfOlY705zDw _model_server_result.datetime_utc '2024-11-04 23:59:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":515}' # _entry.id 6FMR # _exptl.entry_id 6FMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FMR _cell.length_a 103.68 _cell.length_b 110.89 _cell.length_c 110.38 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 19 A PHE 19 1_555 A N MSE 20 A MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 20 A MSE 20 1_555 A N THR 21 A THR 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C GLU 22 A GLU 22 1_555 A N MSE 23 A MSE 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 23 A MSE 23 1_555 A N TRP 24 A TRP 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C GLY 31 A GLY 31 1_555 A N MSE 32 A MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 32 A MSE 32 1_555 A N ARG 33 A ARG 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale7 A C TYR 39 A TYR 39 1_555 A N MSE 40 A MSE 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 A C MSE 40 A MSE 40 1_555 A N TRP 41 A TRP 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale9 A C ILE 59 A ILE 59 1_555 A N MSE 60 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 A C MSE 60 A MSE 60 1_555 A N ALA 61 A ALA 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 A C SER 65 A SER 65 1_555 A N MSE 66 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 A C MSE 66 A MSE 66 1_555 A N VAL 67 A VAL 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale13 A C ILE 95 A ILE 95 1_555 A N MSE 96 A MSE 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C MSE 96 A MSE 96 1_555 A N LEU 97 A LEU 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 A C GLY 185 A GLY 185 1_555 A N MSE 186 A MSE 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 A C MSE 186 A MSE 186 1_555 A N PHE 187 A PHE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale17 A C VAL 237 A VAL 237 1_555 A N MSE 238 A MSE 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale18 A C MSE 238 A MSE 238 1_555 A N ASN 239 A ASN 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale19 A C TRP 267 A TRP 267 1_555 A N MSE 268 A MSE 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale20 A C MSE 268 A MSE 268 1_555 A N ILE 269 A ILE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale21 A C ILE 332 A ILE 332 1_555 A N MSE 333 A MSE 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 A C MSE 333 A MSE 333 1_555 A N LEU 334 A LEU 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale23 A C LEU 361 A LEU 361 1_555 A N MSE 362 A MSE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale24 A C MSE 362 A MSE 362 1_555 A N PHE 363 A PHE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale25 A C LEU 370 A LEU 370 1_555 A N MSE 371 A MSE 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale26 A C MSE 371 A MSE 371 1_555 A N ALA 372 A ALA 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale27 A C GLU 400 A GLU 400 1_555 A N MSE 401 A MSE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale28 A C MSE 401 A MSE 401 1_555 A N LEU 402 A LEU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale29 A C GLN 422 A GLN 422 1_555 A N MSE 423 A MSE 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 A C MSE 423 A MSE 423 1_555 A N MSE 424 A MSE 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale31 A C MSE 424 A MSE 424 1_555 A N SER 425 A SER 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale32 A C SER 425 A SER 425 1_555 A N MSE 426 A MSE 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale33 A C MSE 426 A MSE 426 1_555 A N TRP 427 A TRP 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale34 A C LEU 478 A LEU 478 1_555 A N MSE 479 A MSE 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78M _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL' # _atom_sites.entry_id 6FMR _atom_sites.fract_transf_matrix[1][1] 0.009645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009018 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 78M A 1 501 3 78M 78M . C 2 78M A 1 502 4 78M 78M . D 2 78M A 1 503 5 78M 78M . E 2 78M A 1 504 7 78M 78M . F 2 78M A 1 505 14 78M 78M . G 2 78M A 1 506 15 78M 78M . H 2 78M A 1 507 16 78M 78M . I 3 PO4 A 1 508 19 PO4 PO4 . J 2 78M A 1 509 1 78M 78M . K 2 78M A 1 510 1 78M 78M . L 2 78M A 1 511 2 78M 78M . M 2 78M A 1 512 3 78M 78M . N 2 78M A 1 513 4 78M 78M . O 2 78M A 1 514 5 78M 78M . P 2 78M A 1 515 6 78M 78M . Q 4 HOH A 1 601 28 HOH HOH . Q 4 HOH A 2 602 35 HOH HOH . Q 4 HOH A 3 603 20 HOH HOH . Q 4 HOH A 4 604 4 HOH HOH . Q 4 HOH A 5 605 13 HOH HOH . Q 4 HOH A 6 606 27 HOH HOH . Q 4 HOH A 7 607 31 HOH HOH . Q 4 HOH A 8 608 26 HOH HOH . Q 4 HOH A 9 609 38 HOH HOH . Q 4 HOH A 10 610 11 HOH HOH . Q 4 HOH A 11 611 24 HOH HOH . Q 4 HOH A 12 612 2 HOH HOH . Q 4 HOH A 13 613 25 HOH HOH . Q 4 HOH A 14 614 29 HOH HOH . Q 4 HOH A 15 615 9 HOH HOH . Q 4 HOH A 16 616 22 HOH HOH . Q 4 HOH A 17 617 23 HOH HOH . Q 4 HOH A 18 618 18 HOH HOH . Q 4 HOH A 19 619 34 HOH HOH . Q 4 HOH A 20 620 1 HOH HOH . Q 4 HOH A 21 621 8 HOH HOH . Q 4 HOH A 22 622 30 HOH HOH . Q 4 HOH A 23 623 3 HOH HOH . Q 4 HOH A 24 624 7 HOH HOH . Q 4 HOH A 25 625 10 HOH HOH . Q 4 HOH A 26 626 21 HOH HOH . Q 4 HOH A 27 627 33 HOH HOH . Q 4 HOH A 28 628 37 HOH HOH . Q 4 HOH A 29 629 14 HOH HOH . Q 4 HOH A 30 630 39 HOH HOH . Q 4 HOH A 31 631 17 HOH HOH . Q 4 HOH A 32 632 12 HOH HOH . Q 4 HOH A 33 633 19 HOH HOH . Q 4 HOH A 34 634 5 HOH HOH . Q 4 HOH A 35 635 32 HOH HOH . Q 4 HOH A 36 636 15 HOH HOH . Q 4 HOH A 37 637 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 78M . . . P 2 86.57 89.995 -16.261 1 62.49 ? O21 78M 515 A 1 HETATM 2 C C20 78M . . . P 2 87.236 91.073 -15.663 1 64.96 ? C20 78M 515 A 1 HETATM 3 C C18 78M . . . P 2 86.709 91.267 -14.244 1 68 ? C18 78M 515 A 1 HETATM 4 O O19 78M . . . P 2 85.912 90.173 -13.888 1 67.96 ? O19 78M 515 A 1 HETATM 5 C C17 78M . . . P 2 85.873 92.543 -14.181 1 74.44 ? C17 78M 515 A 1 HETATM 6 O O2 78M . . . P 2 85.968 93.089 -12.897 1 80.21 ? O2 78M 515 A 1 HETATM 7 C C1 78M . . . P 2 87.244 93.568 -12.579 1 81.36 ? C1 78M 515 A 1 HETATM 8 O O1 78M . . . P 2 87.843 94.227 -13.362 1 85.36 ? O1 78M 515 A 1 HETATM 9 C C2 78M . . . P 2 87.863 93.235 -11.224 1 72.41 ? C2 78M 515 A 1 HETATM 10 C C3 78M . . . P 2 88.864 94.319 -10.83 1 71.19 ? C3 78M 515 A 1 HETATM 11 C C4 78M . . . P 2 89.005 94.346 -9.31 1 70.58 ? C4 78M 515 A 1 HETATM 12 C C5 78M . . . P 2 89.422 92.963 -8.814 1 72.55 ? C5 78M 515 A 1 HETATM 13 C C6 78M . . . P 2 89.061 92.812 -7.337 1 71.05 ? C6 78M 515 A 1 HETATM 14 C C7 78M . . . P 2 90.27 93.167 -6.474 1 70.03 ? C7 78M 515 A 1 HETATM 15 C C8 78M . . . P 2 90.239 93.014 -5.164 1 70.13 ? C8 78M 515 A 1 HETATM 16 C C9 78M . . . P 2 88.994 92.475 -4.461 1 68.33 ? C9 78M 515 A 1 HETATM 17 C C10 78M . . . P 2 89.124 90.968 -4.243 1 62.32 ? C10 78M 515 A 1 HETATM 18 C C11 78M . . . P 2 87.893 90.28 -4.83 1 62.34 ? C11 78M 515 A 1 HETATM 19 C C12 78M . . . P 2 87.766 88.863 -4.277 1 64.11 ? C12 78M 515 A 1 HETATM 20 C C13 78M . . . P 2 86.317 88.402 -4.424 1 62.24 ? C13 78M 515 A 1 HETATM 21 C C15 78M . . . P 2 86.02 86.275 -5.69 1 51.52 ? C15 78M 515 A 1 HETATM 22 C C14 78M . . . P 2 86.244 86.881 -4.306 1 57.75 ? C14 78M 515 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #