data_6FMW # _model_server_result.job_id j6PFz9qEoVirHTDz1e5h1A _model_server_result.datetime_utc '2024-11-06 02:00:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6FMW # _exptl.entry_id 6FMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FMW _cell.length_a 114.06 _cell.length_b 145.13 _cell.length_c 39.99 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 147 A CYS 138 1_555 C HG HG . A HG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc2 A O CYS 171 A CYS 162 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc3 A SG CYS 171 A CYS 162 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc4 A SG CYS 174 A CYS 165 1_555 B HG HG . A HG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 237 n n C10 C9 OLC doub 238 n n C10 C11 OLC sing 239 n n C9 C8 OLC sing 240 n n C17 C16 OLC sing 241 z n C11 C12 OLC sing 242 n n C8 C7 OLC sing 243 n n C24 C22 OLC sing 244 n n C24 O25 OLC sing 245 n n C16 C15 OLC sing 246 n n C12 C13 OLC sing 247 n n C7 C6 OLC sing 248 n n C15 C14 OLC sing 249 n n C13 C14 OLC sing 250 n n C6 C5 OLC sing 251 n n C5 C4 OLC sing 252 n n C4 C3 OLC sing 253 n n C3 C2 OLC sing 254 n n C2 C1 OLC sing 255 n n C21 C22 OLC sing 256 n n C21 O20 OLC sing 257 n n C1 O19 OLC doub 258 n n C1 O20 OLC sing 259 n n C22 O23 OLC sing 260 n n C18 H18 OLC sing 261 n n C18 H18A OLC sing 262 n n C18 H18B OLC sing 263 n n C10 H10 OLC sing 264 n n C9 H9 OLC sing 265 n n C17 H17 OLC sing 266 n n C17 H17A OLC sing 267 n n C11 H11 OLC sing 268 n n C11 H11A OLC sing 269 n n C8 H8 OLC sing 270 n n C8 H8A OLC sing 271 n n C24 H24 OLC sing 272 n n C24 H24A OLC sing 273 n n C16 H16 OLC sing 274 n n C16 H16A OLC sing 275 n n C12 H12 OLC sing 276 n n C12 H12A OLC sing 277 n n C7 H7 OLC sing 278 n n C7 H7A OLC sing 279 n n C15 H15 OLC sing 280 n n C15 H15A OLC sing 281 n n C13 H13 OLC sing 282 n n C13 H13A OLC sing 283 n n C6 H6 OLC sing 284 n n C6 H6A OLC sing 285 n n C14 H14 OLC sing 286 n n C14 H14A OLC sing 287 n n C5 H5 OLC sing 288 n n C5 H5A OLC sing 289 n n C4 H4 OLC sing 290 n n C4 H4A OLC sing 291 n n C3 H3 OLC sing 292 n n C3 H3A OLC sing 293 n n C2 H2 OLC sing 294 n n C2 H2A OLC sing 295 n n C21 H21 OLC sing 296 n n C21 H21A OLC sing 297 n n C22 H22 OLC sing 298 n n O25 HO25 OLC sing 299 n n O23 HO23 OLC sing 300 n n # _atom_sites.entry_id 6FMW _atom_sites.fract_transf_matrix[1][1] 0.008767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025006 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HG A 1 301 1 HG HG . C 2 HG A 1 302 2 HG HG . D 3 TRS A 1 303 1 TRS TRS . E 4 OLC A 1 304 2 OLC OLC . F 4 OLC A 1 305 3 OLC OLC . G 5 HOH A 1 401 3 HOH HOH . G 5 HOH A 2 402 2 HOH HOH . G 5 HOH A 3 403 5 HOH HOH . G 5 HOH A 4 404 1 HOH HOH . G 5 HOH A 5 405 4 HOH HOH . G 5 HOH A 6 406 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . F 4 23.722 1.887 8.843 1 47.91 ? C10 OLC 305 A 1 HETATM 2 C C9 OLC . . . F 4 22.881 1.848 7.798 1 43.56 ? C9 OLC 305 A 1 HETATM 3 C C11 OLC . . . F 4 23.194 1.812 10.25 1 49.97 ? C11 OLC 305 A 1 HETATM 4 C C8 OLC . . . F 4 21.387 1.704 7.991 1 48.92 ? C8 OLC 305 A 1 HETATM 5 C C24 OLC . . . F 4 9.395 0.458 6.695 1 56.12 ? C24 OLC 305 A 1 HETATM 6 C C12 OLC . . . F 4 24.176 2.583 11.089 1 45.84 ? C12 OLC 305 A 1 HETATM 7 C C7 OLC . . . F 4 20.68 2.167 6.733 1 56.16 ? C7 OLC 305 A 1 HETATM 8 C C15 OLC . . . F 4 26.173 1.121 13.925 1 60.41 ? C15 OLC 305 A 1 HETATM 9 C C13 OLC . . . F 4 24.34 1.779 12.347 1 56.09 ? C13 OLC 305 A 1 HETATM 10 C C6 OLC . . . F 4 19.581 1.2 6.331 1 55.64 ? C6 OLC 305 A 1 HETATM 11 C C14 OLC . . . F 4 25.479 2.298 13.208 1 45.04 ? C14 OLC 305 A 1 HETATM 12 C C5 OLC . . . F 4 18.296 1.952 6.029 1 52.44 ? C5 OLC 305 A 1 HETATM 13 C C4 OLC . . . F 4 17.357 1.117 5.177 1 42.64 ? C4 OLC 305 A 1 HETATM 14 C C3 OLC . . . F 4 15.992 0.976 5.827 1 43.02 ? C3 OLC 305 A 1 HETATM 15 C C2 OLC . . . F 4 14.892 1.335 4.843 1 62.21 ? C2 OLC 305 A 1 HETATM 16 C C21 OLC . . . F 4 11.393 -0.047 5.318 1 51.55 ? C21 OLC 305 A 1 HETATM 17 C C1 OLC . . . F 4 13.699 0.405 4.98 1 59.05 ? C1 OLC 305 A 1 HETATM 18 C C22 OLC . . . F 4 10.014 0.581 5.318 1 60.15 ? C22 OLC 305 A 1 HETATM 19 O O19 OLC . . . F 4 13.873 -0.797 5.011 1 52.55 ? O19 OLC 305 A 1 HETATM 20 O O25 OLC . . . F 4 8.106 -0.109 6.596 1 63.34 ? O25 OLC 305 A 1 HETATM 21 O O23 OLC . . . F 4 10.107 1.939 4.953 1 66.07 ? O23 OLC 305 A 1 HETATM 22 O O20 OLC . . . F 4 12.39 0.922 5.067 1 68.11 ? O20 OLC 305 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #