data_6FMX
#
_model_server_result.job_id            SDNWuNkGV8I_vQdISiFOpA 
_model_server_result.datetime_utc      '2024-11-06 01:49:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fmx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":305}' 
#
_entry.id    6FMX 
#
_exptl.entry_id    6FMX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FMX 
_cell.length_a            68.757 
_cell.length_b            76.801 
_cell.length_c            98.912 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FMX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NE2 
_struct_conn.ptnr1_label_comp_id            HIS 
_struct_conn.ptnr1_label_seq_id             190 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             HIS 
_struct_conn.ptnr1_auth_seq_id              171 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            G 
_struct_conn.ptnr2_label_atom_id            W 
_struct_conn.ptnr2_label_comp_id            WO4 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             WO4 
_struct_conn.ptnr2_auth_seq_id              306 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        A 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.579 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 237 n n 
C10 C9 OLC doub 238 n n 
C10 C11 OLC sing 239 n n 
C9 C8 OLC sing 240 n n 
C17 C16 OLC sing 241 z n 
C11 C12 OLC sing 242 n n 
C8 C7 OLC sing 243 n n 
C24 C22 OLC sing 244 n n 
C24 O25 OLC sing 245 n n 
C16 C15 OLC sing 246 n n 
C12 C13 OLC sing 247 n n 
C7 C6 OLC sing 248 n n 
C15 C14 OLC sing 249 n n 
C13 C14 OLC sing 250 n n 
C6 C5 OLC sing 251 n n 
C5 C4 OLC sing 252 n n 
C4 C3 OLC sing 253 n n 
C3 C2 OLC sing 254 n n 
C2 C1 OLC sing 255 n n 
C21 C22 OLC sing 256 n n 
C21 O20 OLC sing 257 n n 
C1 O19 OLC doub 258 n n 
C1 O20 OLC sing 259 n n 
C22 O23 OLC sing 260 n n 
C18 H18 OLC sing 261 n n 
C18 H18A OLC sing 262 n n 
C18 H18B OLC sing 263 n n 
C10 H10 OLC sing 264 n n 
C9 H9 OLC sing 265 n n 
C17 H17 OLC sing 266 n n 
C17 H17A OLC sing 267 n n 
C11 H11 OLC sing 268 n n 
C11 H11A OLC sing 269 n n 
C8 H8 OLC sing 270 n n 
C8 H8A OLC sing 271 n n 
C24 H24 OLC sing 272 n n 
C24 H24A OLC sing 273 n n 
C16 H16 OLC sing 274 n n 
C16 H16A OLC sing 275 n n 
C12 H12 OLC sing 276 n n 
C12 H12A OLC sing 277 n n 
C7 H7 OLC sing 278 n n 
C7 H7A OLC sing 279 n n 
C15 H15 OLC sing 280 n n 
C15 H15A OLC sing 281 n n 
C13 H13 OLC sing 282 n n 
C13 H13A OLC sing 283 n n 
C6 H6 OLC sing 284 n n 
C6 H6A OLC sing 285 n n 
C14 H14 OLC sing 286 n n 
C14 H14A OLC sing 287 n n 
C5 H5 OLC sing 288 n n 
C5 H5A OLC sing 289 n n 
C4 H4 OLC sing 290 n n 
C4 H4A OLC sing 291 n n 
C3 H3 OLC sing 292 n n 
C3 H3A OLC sing 293 n n 
C2 H2 OLC sing 294 n n 
C2 H2A OLC sing 295 n n 
C21 H21 OLC sing 296 n n 
C21 H21A OLC sing 297 n n 
C22 H22 OLC sing 298 n n 
O25 HO25 OLC sing 299 n n 
O23 HO23 OLC sing 300 n n 
#
_atom_sites.entry_id                     6FMX 
_atom_sites.fract_transf_matrix[1][1]    0.014544 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013021 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01011 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 OLC A 1 301 1 OLC OLC . 
C 2 OLC A 1 302 2 OLC OLC . 
D 2 OLC A 1 303 3 OLC OLC . 
E 2 OLC A 1 304 4 OLC OLC . 
F 2 OLC A 1 305 5 OLC OLC . 
G 3 WO4 A 1 306 7 WO4 WO4 . 
H 4 HOH A 1 401 135 HOH HOH . 
H 4 HOH A 2 402 74 HOH HOH . 
H 4 HOH A 3 403 144 HOH HOH . 
H 4 HOH A 4 404 67 HOH HOH . 
H 4 HOH A 5 405 68 HOH HOH . 
H 4 HOH A 6 406 134 HOH HOH . 
H 4 HOH A 7 407 120 HOH HOH . 
H 4 HOH A 8 408 150 HOH HOH . 
H 4 HOH A 9 409 137 HOH HOH . 
H 4 HOH A 10 410 77 HOH HOH . 
H 4 HOH A 11 411 40 HOH HOH . 
H 4 HOH A 12 412 110 HOH HOH . 
H 4 HOH A 13 413 95 HOH HOH . 
H 4 HOH A 14 414 93 HOH HOH . 
H 4 HOH A 15 415 104 HOH HOH . 
H 4 HOH A 16 416 101 HOH HOH . 
H 4 HOH A 17 417 48 HOH HOH . 
H 4 HOH A 18 418 97 HOH HOH . 
H 4 HOH A 19 419 142 HOH HOH . 
H 4 HOH A 20 420 73 HOH HOH . 
H 4 HOH A 21 421 51 HOH HOH . 
H 4 HOH A 22 422 71 HOH HOH . 
H 4 HOH A 23 423 138 HOH HOH . 
H 4 HOH A 24 424 103 HOH HOH . 
H 4 HOH A 25 425 75 HOH HOH . 
H 4 HOH A 26 426 89 HOH HOH . 
H 4 HOH A 27 427 141 HOH HOH . 
H 4 HOH A 28 428 72 HOH HOH . 
H 4 HOH A 29 429 86 HOH HOH . 
H 4 HOH A 30 430 9 HOH HOH . 
H 4 HOH A 31 431 124 HOH HOH . 
H 4 HOH A 32 432 98 HOH HOH . 
H 4 HOH A 33 433 131 HOH HOH . 
H 4 HOH A 34 434 76 HOH HOH . 
H 4 HOH A 35 435 66 HOH HOH . 
H 4 HOH A 36 436 149 HOH HOH . 
H 4 HOH A 37 437 109 HOH HOH . 
H 4 HOH A 38 438 146 HOH HOH . 
H 4 HOH A 39 439 8 HOH HOH . 
H 4 HOH A 40 440 23 HOH HOH . 
H 4 HOH A 41 441 145 HOH HOH . 
H 4 HOH A 42 442 26 HOH HOH . 
H 4 HOH A 43 443 80 HOH HOH . 
H 4 HOH A 44 444 107 HOH HOH . 
H 4 HOH A 45 445 96 HOH HOH . 
H 4 HOH A 46 446 81 HOH HOH . 
H 4 HOH A 47 447 18 HOH HOH . 
H 4 HOH A 48 448 56 HOH HOH . 
H 4 HOH A 49 449 90 HOH HOH . 
H 4 HOH A 50 450 105 HOH HOH . 
H 4 HOH A 51 451 49 HOH HOH . 
H 4 HOH A 52 452 91 HOH HOH . 
H 4 HOH A 53 453 148 HOH HOH . 
H 4 HOH A 54 454 116 HOH HOH . 
H 4 HOH A 55 455 139 HOH HOH . 
H 4 HOH A 56 456 12 HOH HOH . 
H 4 HOH A 57 457 112 HOH HOH . 
H 4 HOH A 58 458 84 HOH HOH . 
H 4 HOH A 59 459 3 HOH HOH . 
H 4 HOH A 60 460 46 HOH HOH . 
H 4 HOH A 61 461 130 HOH HOH . 
H 4 HOH A 62 462 151 HOH HOH . 
H 4 HOH A 63 463 28 HOH HOH . 
H 4 HOH A 64 464 29 HOH HOH . 
H 4 HOH A 65 465 94 HOH HOH . 
H 4 HOH A 66 466 133 HOH HOH . 
H 4 HOH A 67 467 27 HOH HOH . 
H 4 HOH A 68 468 60 HOH HOH . 
H 4 HOH A 69 469 5 HOH HOH . 
H 4 HOH A 70 470 65 HOH HOH . 
H 4 HOH A 71 471 38 HOH HOH . 
H 4 HOH A 72 472 64 HOH HOH . 
H 4 HOH A 73 473 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . F 2 32.565 22.567 29.78 1 54.16 ? C10 OLC 305 A 1 
HETATM 2 C C9 OLC . . . F 2 32.204 22.605 28.5 1 52.7 ? C9 OLC 305 A 1 
HETATM 3 C C11 OLC . . . F 2 32.697 21.24 30.488 1 55.51 ? C11 OLC 305 A 1 
HETATM 4 C C8 OLC . . . F 2 31.927 21.322 27.755 1 55.7 ? C8 OLC 305 A 1 
HETATM 5 C C24 OLC . . . F 2 29.459 26.88 15.97 1 58.71 ? C24 OLC 305 A 1 
HETATM 6 C C12 OLC . . . F 2 31.373 20.884 31.153 1 62.13 ? C12 OLC 305 A 1 
HETATM 7 C C7 OLC . . . F 2 32.194 21.529 26.269 1 52.56 ? C7 OLC 305 A 1 
HETATM 8 C C6 OLC . . . F 2 31.893 22.964 25.853 1 51.88 ? C6 OLC 305 A 1 
HETATM 9 C C5 OLC . . . F 2 31.25 23.009 24.471 1 51.6 ? C5 OLC 305 A 1 
HETATM 10 C C4 OLC . . . F 2 31.828 24.145 23.636 1 51.82 ? C4 OLC 305 A 1 
HETATM 11 C C3 OLC . . . F 2 30.743 24.818 22.803 1 52.17 ? C3 OLC 305 A 1 
HETATM 12 C C2 OLC . . . F 2 30.622 24.165 21.431 1 51.85 ? C2 OLC 305 A 1 
HETATM 13 C C21 OLC . . . F 2 30.353 25.665 17.95 1 59.11 ? C21 OLC 305 A 1 
HETATM 14 C C1 OLC . . . F 2 30.269 25.213 20.402 1 53.23 ? C1 OLC 305 A 1 
HETATM 15 C C22 OLC . . . F 2 29.115 26.316 17.343 1 56.14 ? C22 OLC 305 A 1 
HETATM 16 O O19 OLC . . . F 2 30.233 26.394 20.706 1 56.4 ? O19 OLC 305 A 1 
HETATM 17 O O25 OLC . . . F 2 29.584 25.807 15.03 1 65.08 ? O25 OLC 305 A 1 
HETATM 18 O O23 OLC . . . F 2 28.077 25.338 17.211 1 52.92 ? O23 OLC 305 A 1 
HETATM 19 O O20 OLC . . . F 2 29.966 24.823 19.034 1 57.79 ? O20 OLC 305 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           19 
#