data_6FMY # _model_server_result.job_id UHtIHyV1LgFyA2k1L6qPkA _model_server_result.datetime_utc '2024-11-08 05:41:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fmy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":510}' # _entry.id 6FMY # _exptl.entry_id 6FMY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.46 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FMY _cell.length_a 101.22 _cell.length_b 110.2 _cell.length_c 111.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N # _chem_comp.formula 'C18 H34 O4' _chem_comp.formula_weight 314.46 _chem_comp.id 78M _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '7.8 MONOACYLGLYCEROL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C20 78M sing 1 n n C20 C18 78M sing 2 n n C18 O19 78M sing 3 n n C18 C17 78M sing 4 n n C17 O2 78M sing 5 n n O2 C1 78M sing 6 n n C1 O1 78M doub 7 n n C1 C2 78M sing 8 n n C2 C3 78M sing 9 n n C3 C4 78M sing 10 n n C4 C5 78M sing 11 n n C5 C6 78M sing 12 n n C6 C7 78M sing 13 n n C7 C8 78M doub 14 z n C8 C9 78M sing 15 n n C9 C10 78M sing 16 n n C10 C11 78M sing 17 n n C11 C12 78M sing 18 n n C12 C13 78M sing 19 n n C15 C14 78M sing 20 n n C13 C14 78M sing 21 n n O21 H21 78M sing 22 n n C20 H201 78M sing 23 n n C20 H202 78M sing 24 n n C18 H18 78M sing 25 n n O19 H19 78M sing 26 n n C17 H171 78M sing 27 n n C17 H172 78M sing 28 n n C2 H21C 78M sing 29 n n C2 H22C 78M sing 30 n n C3 H31C 78M sing 31 n n C3 H32C 78M sing 32 n n C4 H41C 78M sing 33 n n C4 H42C 78M sing 34 n n C5 H51C 78M sing 35 n n C5 H52C 78M sing 36 n n C6 H61C 78M sing 37 n n C6 H62C 78M sing 38 n n C7 H7 78M sing 39 n n C8 H8 78M sing 40 n n C9 H91C 78M sing 41 n n C9 H92C 78M sing 42 n n C10 H101 78M sing 43 n n C10 H102 78M sing 44 n n C11 H111 78M sing 45 n n C11 H112 78M sing 46 n n C12 H121 78M sing 47 n n C12 H122 78M sing 48 n n C13 H131 78M sing 49 n n C13 H132 78M sing 50 n n C15 H151 78M sing 51 n n C15 H152 78M sing 52 n n C15 H153 78M sing 53 n n C14 H141 78M sing 54 n n C14 H142 78M sing 55 n n # _atom_sites.entry_id 6FMY _atom_sites.fract_transf_matrix[1][1] 0.009879 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 78M A 1 501 1 78M 78M . C 2 78M A 1 502 2 78M 78M . D 2 78M A 1 503 3 78M 78M . E 2 78M A 1 504 4 78M 78M . F 2 78M A 1 505 5 78M 78M . G 2 78M A 1 506 6 78M 78M . H 2 78M A 1 507 7 78M 78M . I 2 78M A 1 508 8 78M 78M . J 2 78M A 1 509 9 78M 78M . K 2 78M A 1 510 10 78M 78M . L 2 78M A 1 511 11 78M 78M . M 2 78M A 1 512 13 78M 78M . N 2 78M A 1 513 15 78M 78M . O 2 78M A 1 514 16 78M 78M . P 2 78M A 1 515 17 78M 78M . Q 2 78M A 1 516 20 78M 78M . R 3 PE5 A 1 517 23 PE5 PE5 . S 4 PO4 A 1 518 24 PO4 PO4 . T 5 HOH A 1 601 10 HOH HOH . T 5 HOH A 2 602 3 HOH HOH . T 5 HOH A 3 603 6 HOH HOH . T 5 HOH A 4 604 15 HOH HOH . T 5 HOH A 5 605 14 HOH HOH . T 5 HOH A 6 606 12 HOH HOH . T 5 HOH A 7 607 13 HOH HOH . T 5 HOH A 8 608 1 HOH HOH . T 5 HOH A 9 609 11 HOH HOH . T 5 HOH A 10 610 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 78M . . . K 2 49.087 14.718 -19.158 0.96 67.17 ? O21 78M 510 A 1 HETATM 2 C C20 78M . . . K 2 49.021 15.168 -17.832 0.96 58.24 ? C20 78M 510 A 1 HETATM 3 C C18 78M . . . K 2 48.246 16.478 -17.801 0.96 50.91 ? C18 78M 510 A 1 HETATM 4 O O19 78M . . . K 2 47.618 16.641 -19.04 0.96 57.79 ? O19 78M 510 A 1 HETATM 5 C C17 78M . . . K 2 49.223 17.625 -17.543 0.96 52.76 ? C17 78M 510 A 1 HETATM 6 O O2 78M . . . K 2 48.733 18.46 -16.531 0.96 58.23 ? O2 78M 510 A 1 HETATM 7 C C1 78M . . . K 2 49.104 18.108 -15.226 0.96 52.63 ? C1 78M 510 A 1 HETATM 8 O O1 78M . . . K 2 49.536 17.032 -14.983 0.96 58.3 ? O1 78M 510 A 1 HETATM 9 C C2 78M . . . K 2 48.952 19.118 -14.096 0.96 51.33 ? C2 78M 510 A 1 HETATM 10 C C3 78M . . . K 2 48.541 18.381 -12.825 0.96 47.2 ? C3 78M 510 A 1 HETATM 11 C C4 78M . . . K 2 47.954 19.389 -11.842 0.96 55.78 ? C4 78M 510 A 1 HETATM 12 C C5 78M . . . K 2 49.056 19.902 -10.918 0.96 59 ? C5 78M 510 A 1 HETATM 13 C C6 78M . . . K 2 49.353 18.844 -9.855 0.96 67.44 ? C6 78M 510 A 1 HETATM 14 C C7 78M . . . K 2 50.608 19.229 -9.074 0.96 60.24 ? C7 78M 510 A 1 HETATM 15 C C8 78M . . . K 2 50.852 18.696 -7.893 0.96 56.08 ? C8 78M 510 A 1 HETATM 16 C C9 78M . . . K 2 49.887 17.685 -7.277 0.96 57.5 ? C9 78M 510 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #