data_6FN9 # _model_server_result.job_id DYJGOGMZJTsyg4-WSlxM6Q _model_server_result.datetime_utc '2024-11-08 16:36:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fn9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 6FN9 # _exptl.entry_id 6FN9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FN9 _cell.length_a 71.94 _cell.length_b 102.42 _cell.length_c 113.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FN9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 224 n n C1 C2 GOL sing 225 n n C1 H11 GOL sing 226 n n C1 H12 GOL sing 227 n n O1 HO1 GOL sing 228 n n C2 O2 GOL sing 229 n n C2 C3 GOL sing 230 n n C2 H2 GOL sing 231 n n O2 HO2 GOL sing 232 n n C3 O3 GOL sing 233 n n C3 H31 GOL sing 234 n n C3 H32 GOL sing 235 n n O3 HO3 GOL sing 236 n n # _atom_sites.entry_id 6FN9 _atom_sites.fract_transf_matrix[1][1] 0.0139 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008805 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DW8 A 1 301 3 DW8 DW8 . D 3 BEZ A 1 302 1 BEZ BEZ . E 4 GOL A 1 303 2 GOL GOL . F 2 DW8 B 1 301 2 DW8 DW8 . G 3 BEZ B 1 302 2 BEZ BEZ . H 4 GOL B 1 303 1 GOL GOL . I 5 HOH A 1 401 33 HOH HOH . I 5 HOH A 2 402 90 HOH HOH . I 5 HOH A 3 403 61 HOH HOH . I 5 HOH A 4 404 82 HOH HOH . I 5 HOH A 5 405 52 HOH HOH . I 5 HOH A 6 406 107 HOH HOH . I 5 HOH A 7 407 41 HOH HOH . I 5 HOH A 8 408 36 HOH HOH . I 5 HOH A 9 409 68 HOH HOH . I 5 HOH A 10 410 86 HOH HOH . I 5 HOH A 11 411 46 HOH HOH . I 5 HOH A 12 412 2 HOH HOH . I 5 HOH A 13 413 53 HOH HOH . I 5 HOH A 14 414 29 HOH HOH . I 5 HOH A 15 415 76 HOH HOH . I 5 HOH A 16 416 1 HOH HOH . I 5 HOH A 17 417 65 HOH HOH . I 5 HOH A 18 418 44 HOH HOH . I 5 HOH A 19 419 18 HOH HOH . I 5 HOH A 20 420 55 HOH HOH . I 5 HOH A 21 421 59 HOH HOH . I 5 HOH A 22 422 26 HOH HOH . I 5 HOH A 23 423 21 HOH HOH . I 5 HOH A 24 424 6 HOH HOH . I 5 HOH A 25 425 24 HOH HOH . I 5 HOH A 26 426 4 HOH HOH . I 5 HOH A 27 427 70 HOH HOH . I 5 HOH A 28 428 19 HOH HOH . I 5 HOH A 29 429 7 HOH HOH . I 5 HOH A 30 430 25 HOH HOH . I 5 HOH A 31 431 5 HOH HOH . I 5 HOH A 32 432 20 HOH HOH . I 5 HOH A 33 433 22 HOH HOH . I 5 HOH A 34 434 58 HOH HOH . I 5 HOH A 35 435 74 HOH HOH . I 5 HOH A 36 436 108 HOH HOH . I 5 HOH A 37 437 81 HOH HOH . I 5 HOH A 38 438 12 HOH HOH . I 5 HOH A 39 439 39 HOH HOH . I 5 HOH A 40 440 54 HOH HOH . I 5 HOH A 41 441 63 HOH HOH . I 5 HOH A 42 442 85 HOH HOH . I 5 HOH A 43 443 49 HOH HOH . I 5 HOH A 44 444 50 HOH HOH . I 5 HOH A 45 445 99 HOH HOH . I 5 HOH A 46 446 91 HOH HOH . I 5 HOH A 47 447 109 HOH HOH . I 5 HOH A 48 448 92 HOH HOH . I 5 HOH A 49 449 101 HOH HOH . I 5 HOH A 50 450 45 HOH HOH . I 5 HOH A 51 451 88 HOH HOH . I 5 HOH A 52 452 77 HOH HOH . I 5 HOH A 53 453 89 HOH HOH . I 5 HOH A 54 454 100 HOH HOH . I 5 HOH A 55 455 93 HOH HOH . I 5 HOH A 56 456 103 HOH HOH . I 5 HOH A 57 457 87 HOH HOH . I 5 HOH A 58 458 102 HOH HOH . I 5 HOH A 59 459 84 HOH HOH . I 5 HOH A 60 460 78 HOH HOH . J 5 HOH B 1 401 96 HOH HOH . J 5 HOH B 2 402 42 HOH HOH . J 5 HOH B 3 403 27 HOH HOH . J 5 HOH B 4 404 95 HOH HOH . J 5 HOH B 5 405 11 HOH HOH . J 5 HOH B 6 406 72 HOH HOH . J 5 HOH B 7 407 35 HOH HOH . J 5 HOH B 8 408 98 HOH HOH . J 5 HOH B 9 409 8 HOH HOH . J 5 HOH B 10 410 38 HOH HOH . J 5 HOH B 11 411 16 HOH HOH . J 5 HOH B 12 412 67 HOH HOH . J 5 HOH B 13 413 69 HOH HOH . J 5 HOH B 14 414 28 HOH HOH . J 5 HOH B 15 415 71 HOH HOH . J 5 HOH B 16 416 73 HOH HOH . J 5 HOH B 17 417 57 HOH HOH . J 5 HOH B 18 418 117 HOH HOH . J 5 HOH B 19 419 23 HOH HOH . J 5 HOH B 20 420 47 HOH HOH . J 5 HOH B 21 421 118 HOH HOH . J 5 HOH B 22 422 17 HOH HOH . J 5 HOH B 23 423 120 HOH HOH . J 5 HOH B 24 424 119 HOH HOH . J 5 HOH B 25 425 32 HOH HOH . J 5 HOH B 26 426 112 HOH HOH . J 5 HOH B 27 427 51 HOH HOH . J 5 HOH B 28 428 30 HOH HOH . J 5 HOH B 29 429 34 HOH HOH . J 5 HOH B 30 430 94 HOH HOH . J 5 HOH B 31 431 10 HOH HOH . J 5 HOH B 32 432 48 HOH HOH . J 5 HOH B 33 433 62 HOH HOH . J 5 HOH B 34 434 37 HOH HOH . J 5 HOH B 35 435 83 HOH HOH . J 5 HOH B 36 436 66 HOH HOH . J 5 HOH B 37 437 9 HOH HOH . J 5 HOH B 38 438 75 HOH HOH . J 5 HOH B 39 439 31 HOH HOH . J 5 HOH B 40 440 115 HOH HOH . J 5 HOH B 41 441 15 HOH HOH . J 5 HOH B 42 442 13 HOH HOH . J 5 HOH B 43 443 14 HOH HOH . J 5 HOH B 44 444 106 HOH HOH . J 5 HOH B 45 445 116 HOH HOH . J 5 HOH B 46 446 105 HOH HOH . J 5 HOH B 47 447 113 HOH HOH . J 5 HOH B 48 448 121 HOH HOH . J 5 HOH B 49 449 110 HOH HOH . J 5 HOH B 50 450 114 HOH HOH . J 5 HOH B 51 451 56 HOH HOH . J 5 HOH B 52 452 3 HOH HOH . J 5 HOH B 53 453 60 HOH HOH . J 5 HOH B 54 454 104 HOH HOH . J 5 HOH B 55 455 97 HOH HOH . J 5 HOH B 56 456 111 HOH HOH . J 5 HOH B 57 457 40 HOH HOH . J 5 HOH B 58 458 79 HOH HOH . J 5 HOH B 59 459 80 HOH HOH . J 5 HOH B 60 460 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 24.46 -7.115 15.134 1 67.51 ? C1 GOL 303 B 1 HETATM 2 O O1 GOL . . . H 4 24.666 -5.741 15.494 1 68.49 ? O1 GOL 303 B 1 HETATM 3 C C2 GOL . . . H 4 25.751 -7.907 15.34 1 67.55 ? C2 GOL 303 B 1 HETATM 4 O O2 GOL . . . H 4 26.488 -7.386 16.459 1 65.31 ? O2 GOL 303 B 1 HETATM 5 C C3 GOL . . . H 4 25.447 -9.385 15.566 1 68.5 ? C3 GOL 303 B 1 HETATM 6 O O3 GOL . . . H 4 26.668 -10.094 15.826 1 69.55 ? O3 GOL 303 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #