data_6FNE # _model_server_result.job_id 7baGwB3ltAwdnKwh8OZmRA _model_server_result.datetime_utc '2024-12-21 12:29:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":802}' # _entry.id 6FNE # _exptl.entry_id 6FNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FNE _cell.length_a 65.912 _cell.length_b 66.161 _cell.length_c 218.823 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 2PE sing 1 n n O1 HO1 2PE sing 2 n n C2 C3 2PE sing 3 n n C2 H21 2PE sing 4 n n C2 H22 2PE sing 5 n n C3 O4 2PE sing 6 n n C3 H31 2PE sing 7 n n C3 H32 2PE sing 8 n n O4 C5 2PE sing 9 n n C5 C6 2PE sing 10 n n C5 H51 2PE sing 11 n n C5 H52 2PE sing 12 n n C6 O7 2PE sing 13 n n C6 H61 2PE sing 14 n n C6 H62 2PE sing 15 n n O7 C8 2PE sing 16 n n C8 C9 2PE sing 17 n n C8 H81 2PE sing 18 n n C8 H82 2PE sing 19 n n C9 O10 2PE sing 20 n n C9 H91 2PE sing 21 n n C9 H92 2PE sing 22 n n O10 C11 2PE sing 23 n n C11 C12 2PE sing 24 n n C11 H111 2PE sing 25 n n C11 H112 2PE sing 26 n n C12 O13 2PE sing 27 n n C12 H121 2PE sing 28 n n C12 H122 2PE sing 29 n n O13 C14 2PE sing 30 n n C14 C15 2PE sing 31 n n C14 H141 2PE sing 32 n n C14 H142 2PE sing 33 n n C15 O16 2PE sing 34 n n C15 H151 2PE sing 35 n n C15 H152 2PE sing 36 n n O16 C17 2PE sing 37 n n C17 C18 2PE sing 38 n n C17 H171 2PE sing 39 n n C17 H172 2PE sing 40 n n C18 O19 2PE sing 41 n n C18 H181 2PE sing 42 n n C18 H182 2PE sing 43 n n O19 C20 2PE sing 44 n n C20 C21 2PE sing 45 n n C20 H201 2PE sing 46 n n C20 H202 2PE sing 47 n n C21 O22 2PE sing 48 n n C21 H211 2PE sing 49 n n C21 H212 2PE sing 50 n n O22 C23 2PE sing 51 n n C23 C24 2PE sing 52 n n C23 H231 2PE sing 53 n n C23 H232 2PE sing 54 n n C24 O25 2PE sing 55 n n C24 H241 2PE sing 56 n n C24 H242 2PE sing 57 n n O25 C26 2PE sing 58 n n C26 C27 2PE sing 59 n n C26 H261 2PE sing 60 n n C26 H262 2PE sing 61 n n C27 O28 2PE sing 62 n n C27 H271 2PE sing 63 n n C27 H272 2PE sing 64 n n O28 HO2 2PE sing 65 n n # _atom_sites.entry_id 6FNE _atom_sites.fract_transf_matrix[1][1] 0.015172 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DY5 A 1 801 1 DY5 LIG . D 3 2PE A 1 802 1 2PE 2PE . E 4 HOH A 1 901 6 HOH HOH . E 4 HOH A 2 902 21 HOH HOH . E 4 HOH A 3 903 17 HOH HOH . E 4 HOH A 4 904 10 HOH HOH . E 4 HOH A 5 905 15 HOH HOH . E 4 HOH A 6 906 19 HOH HOH . E 4 HOH A 7 907 24 HOH HOH . E 4 HOH A 8 908 22 HOH HOH . E 4 HOH A 9 909 20 HOH HOH . E 4 HOH A 10 910 12 HOH HOH . E 4 HOH A 11 911 7 HOH HOH . E 4 HOH A 12 912 14 HOH HOH . E 4 HOH A 13 913 2 HOH HOH . E 4 HOH A 14 914 13 HOH HOH . F 4 HOH B 1 801 18 HOH HOH . F 4 HOH B 2 802 8 HOH HOH . F 4 HOH B 3 803 3 HOH HOH . F 4 HOH B 4 804 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . D 3 13.107 -2.572 15.088 1 88.63 ? O1 2PE 802 A 1 HETATM 2 C C2 2PE . . . D 3 12.511 -3.785 15.478 1 89.1 ? C2 2PE 802 A 1 HETATM 3 C C3 2PE . . . D 3 11.09 -3.544 16.018 1 88.99 ? C3 2PE 802 A 1 HETATM 4 O O4 2PE . . . D 3 10.212 -4.628 15.795 1 89.29 ? O4 2PE 802 A 1 HETATM 5 C C5 2PE . . . D 3 9.431 -5.006 16.9 1 90.28 ? C5 2PE 802 A 1 HETATM 6 C C6 2PE . . . D 3 9.673 -6.487 17.22 1 90.45 ? C6 2PE 802 A 1 HETATM 7 O O7 2PE . . . D 3 8.477 -7.187 17.449 1 89.51 ? O7 2PE 802 A 1 HETATM 8 C C8 2PE . . . D 3 8.243 -8.218 16.547 1 85.98 ? C8 2PE 802 A 1 HETATM 9 C C9 2PE . . . D 3 7.234 -7.654 15.566 1 81.89 ? C9 2PE 802 A 1 HETATM 10 O O10 2PE . . . D 3 6.999 -8.608 14.582 1 77.7 ? O10 2PE 802 A 1 HETATM 11 C C11 2PE . . . D 3 5.651 -8.776 14.263 1 76.58 ? C11 2PE 802 A 1 HETATM 12 C C12 2PE . . . D 3 5.168 -10.059 14.924 1 76.72 ? C12 2PE 802 A 1 HETATM 13 O O13 2PE . . . D 3 5.954 -10.3 16.064 1 77.95 ? O13 2PE 802 A 1 HETATM 14 C C14 2PE . . . D 3 5.425 -11.219 16.986 1 76.31 ? C14 2PE 802 A 1 HETATM 15 C C15 2PE . . . D 3 6.329 -12.442 16.96 1 73.17 ? C15 2PE 802 A 1 HETATM 16 O O16 2PE . . . D 3 6.336 -12.941 15.653 1 70.7 ? O16 2PE 802 A 1 HETATM 17 C C17 2PE . . . D 3 7.551 -12.858 14.965 1 67.84 ? C17 2PE 802 A 1 HETATM 18 C C18 2PE . . . D 3 7.273 -13.259 13.515 1 64.48 ? C18 2PE 802 A 1 HETATM 19 O O19 2PE . . . D 3 7.611 -12.228 12.627 1 60.22 ? O19 2PE 802 A 1 HETATM 20 C C20 2PE . . . D 3 8.938 -12.278 12.209 1 55.9 ? C20 2PE 802 A 1 HETATM 21 C C21 2PE . . . D 3 8.962 -12.245 10.691 1 56 ? C21 2PE 802 A 1 HETATM 22 O O22 2PE . . . D 3 10.172 -11.667 10.258 1 61.57 ? O22 2PE 802 A 1 HETATM 23 C C23 2PE . . . D 3 10.344 -10.299 10.635 1 67.87 ? C23 2PE 802 A 1 HETATM 24 C C24 2PE . . . D 3 11.742 -9.675 10.395 1 69.58 ? C24 2PE 802 A 1 HETATM 25 O O25 2PE . . . D 3 11.763 -8.649 9.422 1 68.42 ? O25 2PE 802 A 1 HETATM 26 C C26 2PE . . . D 3 12.286 -9.037 8.173 1 65.8 ? C26 2PE 802 A 1 HETATM 27 C C27 2PE . . . D 3 13.745 -8.621 8.021 1 63.95 ? C27 2PE 802 A 1 HETATM 28 O O28 2PE . . . D 3 14.328 -9.564 7.175 1 63.37 ? O28 2PE 802 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #