data_6FNF # _model_server_result.job_id J9x8fznWkUrinSgtJkPDmA _model_server_result.datetime_utc '2024-11-28 06:20:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fnf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 6FNF # _exptl.entry_id 6FNF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 503.479 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 4-methyl-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]-~{N}-[3-(trifluoromethyl)phenyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.31 _cell.angle_gamma 90 _cell.entry_id 6FNF _cell.length_a 32.23 _cell.length_b 104.796 _cell.length_c 39.957 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FNF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H20 F3 N7 O' _chem_comp.formula_weight 503.479 _chem_comp.id DXH _chem_comp.mon_nstd_flag . _chem_comp.name 4-methyl-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]-~{N}-[3-(trifluoromethyl)phenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N29 C28 DXH doub 83 n y N29 N30 DXH sing 84 n y C31 N30 DXH sing 85 n n C28 C27 DXH sing 86 n y N30 C26 DXH sing 87 n y C27 C26 DXH doub 88 n y C27 C22 DXH sing 89 n y C26 N25 DXH sing 90 n y C22 N21 DXH sing 91 n n C22 N23 DXH doub 92 n y N21 C03 DXH sing 93 n n N25 C24 DXH doub 94 n y C01 C02 DXH sing 95 n n N23 C24 DXH sing 96 n y C24 C32 DXH sing 97 n n C03 C02 DXH doub 98 n y C03 C04 DXH sing 99 n y C02 C07 DXH sing 100 n y C04 C05 DXH doub 101 n y C32 C37 DXH doub 102 n y C32 C33 DXH sing 103 n y C37 C36 DXH sing 104 n y C07 C06 DXH doub 105 n y C05 C06 DXH sing 106 n y C05 C08 DXH sing 107 n n C33 N34 DXH doub 108 n y C36 C35 DXH doub 109 n y O09 C08 DXH doub 110 n n C08 N10 DXH sing 111 n n F20 C17 DXH sing 112 n n N34 C35 DXH sing 113 n y N10 C11 DXH sing 114 n n C16 C11 DXH doub 115 n y C16 C15 DXH sing 116 n y C17 F18 DXH sing 117 n n C17 F19 DXH sing 118 n n C17 C15 DXH sing 119 n n C11 C12 DXH sing 120 n y C15 C14 DXH doub 121 n y C12 C13 DXH doub 122 n y C14 C13 DXH sing 123 n y C01 H1 DXH sing 124 n n C01 H2 DXH sing 125 n n C01 H3 DXH sing 126 n n C04 H4 DXH sing 127 n n C06 H5 DXH sing 128 n n C07 H6 DXH sing 129 n n N10 H7 DXH sing 130 n n C12 H8 DXH sing 131 n n C13 H9 DXH sing 132 n n C14 H10 DXH sing 133 n n C16 H11 DXH sing 134 n n N21 H12 DXH sing 135 n n C28 H13 DXH sing 136 n n C31 H14 DXH sing 137 n n C31 H15 DXH sing 138 n n C31 H16 DXH sing 139 n n C33 H17 DXH sing 140 n n C35 H18 DXH sing 141 n n C36 H19 DXH sing 142 n n C37 H20 DXH sing 143 n n # _atom_sites.entry_id 6FNF _atom_sites.fract_transf_matrix[1][1] 0.031027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010267 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009542 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DXH A 1 1001 1001 DXH UNL . C 3 HOH A 1 1101 1 HOH HOH . C 3 HOH A 2 1102 63 HOH HOH . C 3 HOH A 3 1103 78 HOH HOH . C 3 HOH A 4 1104 89 HOH HOH . C 3 HOH A 5 1105 57 HOH HOH . C 3 HOH A 6 1106 35 HOH HOH . C 3 HOH A 7 1107 36 HOH HOH . C 3 HOH A 8 1108 69 HOH HOH . C 3 HOH A 9 1109 92 HOH HOH . C 3 HOH A 10 1110 47 HOH HOH . C 3 HOH A 11 1111 42 HOH HOH . C 3 HOH A 12 1112 115 HOH HOH . C 3 HOH A 13 1113 83 HOH HOH . C 3 HOH A 14 1114 43 HOH HOH . C 3 HOH A 15 1115 99 HOH HOH . C 3 HOH A 16 1116 21 HOH HOH . C 3 HOH A 17 1117 3 HOH HOH . C 3 HOH A 18 1118 59 HOH HOH . C 3 HOH A 19 1119 2 HOH HOH . C 3 HOH A 20 1120 72 HOH HOH . C 3 HOH A 21 1121 111 HOH HOH . C 3 HOH A 22 1122 40 HOH HOH . C 3 HOH A 23 1123 55 HOH HOH . C 3 HOH A 24 1124 24 HOH HOH . C 3 HOH A 25 1125 41 HOH HOH . C 3 HOH A 26 1126 18 HOH HOH . C 3 HOH A 27 1127 53 HOH HOH . C 3 HOH A 28 1128 45 HOH HOH . C 3 HOH A 29 1129 80 HOH HOH . C 3 HOH A 30 1130 82 HOH HOH . C 3 HOH A 31 1131 16 HOH HOH . C 3 HOH A 32 1132 56 HOH HOH . C 3 HOH A 33 1133 65 HOH HOH . C 3 HOH A 34 1134 46 HOH HOH . C 3 HOH A 35 1135 38 HOH HOH . C 3 HOH A 36 1136 9 HOH HOH . C 3 HOH A 37 1137 100 HOH HOH . C 3 HOH A 38 1138 112 HOH HOH . C 3 HOH A 39 1139 71 HOH HOH . C 3 HOH A 40 1140 48 HOH HOH . C 3 HOH A 41 1141 12 HOH HOH . C 3 HOH A 42 1142 19 HOH HOH . C 3 HOH A 43 1143 84 HOH HOH . C 3 HOH A 44 1144 85 HOH HOH . C 3 HOH A 45 1145 49 HOH HOH . C 3 HOH A 46 1146 14 HOH HOH . C 3 HOH A 47 1147 7 HOH HOH . C 3 HOH A 48 1148 8 HOH HOH . C 3 HOH A 49 1149 113 HOH HOH . C 3 HOH A 50 1150 31 HOH HOH . C 3 HOH A 51 1151 11 HOH HOH . C 3 HOH A 52 1152 51 HOH HOH . C 3 HOH A 53 1153 118 HOH HOH . C 3 HOH A 54 1154 77 HOH HOH . C 3 HOH A 55 1155 104 HOH HOH . C 3 HOH A 56 1156 73 HOH HOH . C 3 HOH A 57 1157 91 HOH HOH . C 3 HOH A 58 1158 10 HOH HOH . C 3 HOH A 59 1159 105 HOH HOH . C 3 HOH A 60 1160 64 HOH HOH . C 3 HOH A 61 1161 44 HOH HOH . C 3 HOH A 62 1162 4 HOH HOH . C 3 HOH A 63 1163 20 HOH HOH . C 3 HOH A 64 1164 67 HOH HOH . C 3 HOH A 65 1165 60 HOH HOH . C 3 HOH A 66 1166 58 HOH HOH . C 3 HOH A 67 1167 108 HOH HOH . C 3 HOH A 68 1168 25 HOH HOH . C 3 HOH A 69 1169 98 HOH HOH . C 3 HOH A 70 1170 33 HOH HOH . C 3 HOH A 71 1171 54 HOH HOH . C 3 HOH A 72 1172 6 HOH HOH . C 3 HOH A 73 1173 26 HOH HOH . C 3 HOH A 74 1174 86 HOH HOH . C 3 HOH A 75 1175 37 HOH HOH . C 3 HOH A 76 1176 28 HOH HOH . C 3 HOH A 77 1177 81 HOH HOH . C 3 HOH A 78 1178 70 HOH HOH . C 3 HOH A 79 1179 79 HOH HOH . C 3 HOH A 80 1180 29 HOH HOH . C 3 HOH A 81 1181 93 HOH HOH . C 3 HOH A 82 1182 15 HOH HOH . C 3 HOH A 83 1183 13 HOH HOH . C 3 HOH A 84 1184 39 HOH HOH . C 3 HOH A 85 1185 87 HOH HOH . C 3 HOH A 86 1186 50 HOH HOH . C 3 HOH A 87 1187 90 HOH HOH . C 3 HOH A 88 1188 32 HOH HOH . C 3 HOH A 89 1189 22 HOH HOH . C 3 HOH A 90 1190 5 HOH HOH . C 3 HOH A 91 1191 116 HOH HOH . C 3 HOH A 92 1192 52 HOH HOH . C 3 HOH A 93 1193 30 HOH HOH . C 3 HOH A 94 1194 34 HOH HOH . C 3 HOH A 95 1195 17 HOH HOH . C 3 HOH A 96 1196 103 HOH HOH . C 3 HOH A 97 1197 62 HOH HOH . C 3 HOH A 98 1198 75 HOH HOH . C 3 HOH A 99 1199 27 HOH HOH . C 3 HOH A 100 1200 61 HOH HOH . C 3 HOH A 101 1201 66 HOH HOH . C 3 HOH A 102 1202 88 HOH HOH . C 3 HOH A 103 1203 102 HOH HOH . C 3 HOH A 104 1204 107 HOH HOH . C 3 HOH A 105 1205 23 HOH HOH . C 3 HOH A 106 1206 97 HOH HOH . C 3 HOH A 107 1207 96 HOH HOH . C 3 HOH A 108 1208 117 HOH HOH . C 3 HOH A 109 1209 109 HOH HOH . C 3 HOH A 110 1210 106 HOH HOH . C 3 HOH A 111 1211 119 HOH HOH . C 3 HOH A 112 1212 114 HOH HOH . C 3 HOH A 113 1213 94 HOH HOH . C 3 HOH A 114 1214 101 HOH HOH . C 3 HOH A 115 1215 68 HOH HOH . C 3 HOH A 116 1216 74 HOH HOH . C 3 HOH A 117 1217 110 HOH HOH . C 3 HOH A 118 1218 76 HOH HOH . C 3 HOH A 119 1219 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 DXH . . . B 2 -82.142 -22.359 84.367 1 26.79 ? C01 DXH 1001 A 1 HETATM 2 C C02 DXH . . . B 2 -82.721 -21.306 85.278 1 26.33 ? C02 DXH 1001 A 1 HETATM 3 C C03 DXH . . . B 2 -82.568 -19.949 84.974 1 26.47 ? C03 DXH 1001 A 1 HETATM 4 C C04 DXH . . . B 2 -83.106 -19.008 85.781 1 29.53 ? C04 DXH 1001 A 1 HETATM 5 C C05 DXH . . . B 2 -83.798 -19.381 86.878 1 26.27 ? C05 DXH 1001 A 1 HETATM 6 C C06 DXH . . . B 2 -83.977 -20.702 87.181 1 27.96 ? C06 DXH 1001 A 1 HETATM 7 C C07 DXH . . . B 2 -83.43 -21.684 86.362 1 26.55 ? C07 DXH 1001 A 1 HETATM 8 C C08 DXH . . . B 2 -84.385 -18.242 87.714 1 25.41 ? C08 DXH 1001 A 1 HETATM 9 O O09 DXH . . . B 2 -84.02 -17.179 87.601 1 27.39 ? O09 DXH 1001 A 1 HETATM 10 N N10 DXH . . . B 2 -85.479 -18.605 88.62 1 30.57 ? N10 DXH 1001 A 1 HETATM 11 C C11 DXH . . . B 2 -86.121 -17.624 89.392 1 29.85 ? C11 DXH 1001 A 1 HETATM 12 C C12 DXH . . . B 2 -86.443 -17.93 90.684 1 26.74 ? C12 DXH 1001 A 1 HETATM 13 C C13 DXH . . . B 2 -87.115 -17.009 91.449 1 28.44 ? C13 DXH 1001 A 1 HETATM 14 C C14 DXH . . . B 2 -87.436 -15.8 90.941 1 33.67 ? C14 DXH 1001 A 1 HETATM 15 C C15 DXH . . . B 2 -87.125 -15.499 89.654 1 32.77 ? C15 DXH 1001 A 1 HETATM 16 C C16 DXH . . . B 2 -86.439 -16.45 88.856 1 27.21 ? C16 DXH 1001 A 1 HETATM 17 C C17 DXH . . . B 2 -87.501 -14.134 89.126 1 33.33 ? C17 DXH 1001 A 1 HETATM 18 F F18 DXH . . . B 2 -86.536 -13.353 89.536 1 34.5 ? F18 DXH 1001 A 1 HETATM 19 F F19 DXH . . . B 2 -88.623 -13.635 89.63 1 34.61 ? F19 DXH 1001 A 1 HETATM 20 F F20 DXH . . . B 2 -87.638 -14.112 87.83 1 34.69 ? F20 DXH 1001 A 1 HETATM 21 N N21 DXH . . . B 2 -81.866 -19.437 83.805 1 28.79 ? N21 DXH 1001 A 1 HETATM 22 C C22 DXH . . . B 2 -80.412 -19.227 83.778 1 28.75 ? C22 DXH 1001 A 1 HETATM 23 N N23 DXH . . . B 2 -79.723 -19.501 84.82 1 31.15 ? N23 DXH 1001 A 1 HETATM 24 C C24 DXH . . . B 2 -78.439 -19.323 84.84 1 32.27 ? C24 DXH 1001 A 1 HETATM 25 N N25 DXH . . . B 2 -77.753 -18.873 83.832 1 32.21 ? N25 DXH 1001 A 1 HETATM 26 C C26 DXH . . . B 2 -78.368 -18.551 82.709 1 32.57 ? C26 DXH 1001 A 1 HETATM 27 C C27 DXH . . . B 2 -79.714 -18.71 82.635 1 27.07 ? C27 DXH 1001 A 1 HETATM 28 C C28 DXH . . . B 2 -80.06 -18.28 81.366 1 32.83 ? C28 DXH 1001 A 1 HETATM 29 N N29 DXH . . . B 2 -78.959 -17.904 80.757 1 34.88 ? N29 DXH 1001 A 1 HETATM 30 N N30 DXH . . . B 2 -77.958 -18.054 81.555 1 31.68 ? N30 DXH 1001 A 1 HETATM 31 C C31 DXH . . . B 2 -76.621 -17.747 81.214 1 36.46 ? C31 DXH 1001 A 1 HETATM 32 C C32 DXH . . . B 2 -77.7 -19.699 86.1 1 30.94 ? C32 DXH 1001 A 1 HETATM 33 C C33 DXH . . . B 2 -78.408 -20.214 87.153 1 34.17 ? C33 DXH 1001 A 1 HETATM 34 N N34 DXH . . . B 2 -77.796 -20.547 88.22 1 41.98 ? N34 DXH 1001 A 1 HETATM 35 C C35 DXH . . . B 2 -76.516 -20.407 88.339 1 31.74 ? C35 DXH 1001 A 1 HETATM 36 C C36 DXH . . . B 2 -75.74 -19.889 87.323 1 32.16 ? C36 DXH 1001 A 1 HETATM 37 C C37 DXH . . . B 2 -76.349 -19.52 86.173 1 38.83 ? C37 DXH 1001 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #