data_6FO0 # _model_server_result.job_id q7rKTu6MtJ7jRoKoYbcnTA _model_server_result.datetime_utc '2025-02-28 06:49:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":501}' # _entry.id 6FO0 # _exptl.entry_id 6FO0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FO0 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 13 X N N ? 13 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 217 R CYS 139 1_555 E SG CYS 236 R CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 H SG CYS 37 U CYS 24 1_555 H SG CYS 81 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 H SG CYS 53 U CYS 40 1_555 H SG CYS 67 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 O SG CYS 217 E CYS 139 1_555 O SG CYS 236 E CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 R SG CYS 37 H CYS 24 1_555 R SG CYS 81 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 R SG CYS 53 H CYS 40 1_555 R SG CYS 67 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 C NE2 HIS 97 P HIS 97 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc2 C NE2 HIS 182 P HIS 182 1_555 U FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc3 C NE2 HIS 196 P HIS 196 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc4 D NE2 HIS 125 Q HIS 41 1_555 X FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc5 M NE2 HIS 97 C HIS 97 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc6 M NE2 HIS 196 C HIS 196 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc7 N NE2 HIS 125 D HIS 41 1_555 BA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 175 n n FE NB HEC sing 176 n n FE NC HEC sing 177 n n FE ND HEC sing 178 n n CHA C1A HEC doub 179 n n CHA C4D HEC sing 180 n n CHA HHA HEC sing 181 n n CHB C4A HEC doub 182 n n CHB C1B HEC sing 183 n n CHB HHB HEC sing 184 n n CHC C4B HEC doub 185 n n CHC C1C HEC sing 186 n n CHC HHC HEC sing 187 n n CHD C4C HEC doub 188 n n CHD C1D HEC sing 189 n n CHD HHD HEC sing 190 n n NA C1A HEC sing 191 n y NA C4A HEC sing 192 n y C1A C2A HEC sing 193 n y C2A C3A HEC doub 194 n y C2A CAA HEC sing 195 n n C3A C4A HEC sing 196 n y C3A CMA HEC sing 197 n n CMA HMA1 HEC sing 198 n n CMA HMA2 HEC sing 199 n n CMA HMA3 HEC sing 200 n n CAA CBA HEC sing 201 n n CAA HAA1 HEC sing 202 n n CAA HAA2 HEC sing 203 n n CBA CGA HEC sing 204 n n CBA HBA1 HEC sing 205 n n CBA HBA2 HEC sing 206 n n CGA O1A HEC doub 207 n n CGA O2A HEC sing 208 n n O2A H2A HEC sing 209 n n NB C1B HEC sing 210 n y NB C4B HEC sing 211 n y C1B C2B HEC doub 212 n y C2B C3B HEC sing 213 n y C2B CMB HEC sing 214 n n C3B C4B HEC sing 215 n y C3B CAB HEC doub 216 e n CMB HMB1 HEC sing 217 n n CMB HMB2 HEC sing 218 n n CMB HMB3 HEC sing 219 n n CAB CBB HEC sing 220 n n CAB HAB HEC sing 221 n n CBB HBB1 HEC sing 222 n n CBB HBB2 HEC sing 223 n n CBB HBB3 HEC sing 224 n n NC C1C HEC sing 225 n y NC C4C HEC sing 226 n y C1C C2C HEC doub 227 n y C2C C3C HEC sing 228 n y C2C CMC HEC sing 229 n n C3C C4C HEC sing 230 n y C3C CAC HEC doub 231 e n CMC HMC1 HEC sing 232 n n CMC HMC2 HEC sing 233 n n CMC HMC3 HEC sing 234 n n CAC CBC HEC sing 235 n n CAC HAC HEC sing 236 n n CBC HBC1 HEC sing 237 n n CBC HBC2 HEC sing 238 n n CBC HBC3 HEC sing 239 n n ND C1D HEC sing 240 n y ND C4D HEC sing 241 n y C1D C2D HEC doub 242 n y C2D C3D HEC sing 243 n y C2D CMD HEC sing 244 n n C3D C4D HEC doub 245 n y C3D CAD HEC sing 246 n n CMD HMD1 HEC sing 247 n n CMD HMD2 HEC sing 248 n n CMD HMD3 HEC sing 249 n n CAD CBD HEC sing 250 n n CAD HAD1 HEC sing 251 n n CAD HAD2 HEC sing 252 n n CBD CGD HEC sing 253 n n CBD HBD1 HEC sing 254 n n CBD HBD2 HEC sing 255 n n CGD O1D HEC doub 256 n n CGD O2D HEC sing 257 n n O2D H2D HEC sing 258 n n # _atom_sites.entry_id 6FO0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 HEM P 1 501 501 HEM HEM . V 11 HEM P 1 502 502 HEM HEM . W 12 G8U P 1 503 503 G8U G8U . X 13 HEC Q 1 501 501 HEC HEC . Y 11 HEM C 1 501 501 HEM HEM . Z 11 HEM C 1 502 502 HEM HEM . AA 12 G8U C 1 503 503 G8U G8U . BA 13 HEC D 1 501 501 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . BA 13 113.458 81.212 163.597 1 50.73 ? FE HEC 501 D 1 HETATM 2 C CHA HEC . . . BA 13 115.97 82.134 161.758 1 50.73 ? CHA HEC 501 D 1 HETATM 3 C CHB HEC . . . BA 13 111.956 79.607 160.939 1 50.73 ? CHB HEC 501 D 1 HETATM 4 C CHC HEC . . . BA 13 110.906 79.91 165.65 1 50.73 ? CHC HEC 501 D 1 HETATM 5 C CHD HEC . . . BA 13 114.151 83.433 166.031 1 50.73 ? CHD HEC 501 D 1 HETATM 6 N NA HEC . . . BA 13 113.876 80.871 161.73 1 50.73 ? NA HEC 501 D 1 HETATM 7 C C1A HEC . . . BA 13 114.975 81.43 161.137 1 50.73 ? C1A HEC 501 D 1 HETATM 8 C C2A HEC . . . BA 13 114.927 81.14 159.73 1 50.73 ? C2A HEC 501 D 1 HETATM 9 C C3A HEC . . . BA 13 113.821 80.445 159.488 1 50.73 ? C3A HEC 501 D 1 HETATM 10 C C4A HEC . . . BA 13 113.138 80.266 160.742 1 50.73 ? C4A HEC 501 D 1 HETATM 11 C CMA HEC . . . BA 13 113.32 79.903 158.14 1 50.73 ? CMA HEC 501 D 1 HETATM 12 C CAA HEC . . . BA 13 116.002 81.623 158.749 1 50.73 ? CAA HEC 501 D 1 HETATM 13 C CBA HEC . . . BA 13 116.701 80.46 158.083 1 50.73 ? CBA HEC 501 D 1 HETATM 14 C CGA HEC . . . BA 13 118.005 81.003 157.577 1 50.73 ? CGA HEC 501 D 1 HETATM 15 O O1A HEC . . . BA 13 118.551 81.913 158.243 1 50.73 ? O1A HEC 501 D 1 HETATM 16 O O2A HEC . . . BA 13 118.496 80.526 156.525 1 50.73 ? O2A HEC 501 D 1 HETATM 17 N NB HEC . . . BA 13 111.7 80.089 163.33 1 50.73 ? NB HEC 501 D 1 HETATM 18 C C1B HEC . . . BA 13 111.421 79.384 162.18 1 50.73 ? C1B HEC 501 D 1 HETATM 19 C C2B HEC . . . BA 13 110.468 78.353 162.5 1 50.73 ? C2B HEC 501 D 1 HETATM 20 C C3B HEC . . . BA 13 110.19 78.422 163.796 1 50.73 ? C3B HEC 501 D 1 HETATM 21 C C4B HEC . . . BA 13 110.948 79.515 164.339 1 50.73 ? C4B HEC 501 D 1 HETATM 22 C CMB HEC . . . BA 13 109.901 77.354 161.488 1 50.73 ? CMB HEC 501 D 1 HETATM 23 C CAB HEC . . . BA 13 109.23 77.527 164.603 1 50.73 ? CAB HEC 501 D 1 HETATM 24 C CBB HEC . . . BA 13 109.574 76.043 164.394 1 50.73 ? CBB HEC 501 D 1 HETATM 25 N NC HEC . . . BA 13 112.605 81.641 165.443 1 50.73 ? NC HEC 501 D 1 HETATM 26 C C1C HEC . . . BA 13 111.68 80.915 166.166 1 50.73 ? C1C HEC 501 D 1 HETATM 27 C C2C HEC . . . BA 13 111.81 81.269 167.557 1 50.73 ? C2C HEC 501 D 1 HETATM 28 C C3C HEC . . . BA 13 112.571 82.34 167.593 1 50.73 ? C3C HEC 501 D 1 HETATM 29 C C4C HEC . . . BA 13 113.186 82.522 166.315 1 50.73 ? C4C HEC 501 D 1 HETATM 30 C CMC HEC . . . BA 13 110.824 80.885 168.68 1 50.73 ? CMC HEC 501 D 1 HETATM 31 C CAC HEC . . . BA 13 112.913 83.114 168.854 1 50.73 ? CAC HEC 501 D 1 HETATM 32 C CBC HEC . . . BA 13 113.822 82.268 169.749 1 50.73 ? CBC HEC 501 D 1 HETATM 33 N ND HEC . . . BA 13 114.821 82.658 163.823 1 50.73 ? ND HEC 501 D 1 HETATM 34 C C1D HEC . . . BA 13 115.028 83.342 165 1 50.73 ? C1D HEC 501 D 1 HETATM 35 C C2D HEC . . . BA 13 116.328 83.941 164.985 1 50.73 ? C2D HEC 501 D 1 HETATM 36 C C3D HEC . . . BA 13 116.933 83.536 163.645 1 50.73 ? C3D HEC 501 D 1 HETATM 37 C C4D HEC . . . BA 13 115.911 82.745 162.986 1 50.73 ? C4D HEC 501 D 1 HETATM 38 C CMD HEC . . . BA 13 116.954 84.797 166.103 1 50.73 ? CMD HEC 501 D 1 HETATM 39 C CAD HEC . . . BA 13 118.331 83.95 163.161 1 50.73 ? CAD HEC 501 D 1 HETATM 40 C CBD HEC . . . BA 13 118.975 82.796 162.409 1 50.73 ? CBD HEC 501 D 1 HETATM 41 C CGD HEC . . . BA 13 120.224 83.321 161.787 1 50.73 ? CGD HEC 501 D 1 HETATM 42 O O1D HEC . . . BA 13 120.848 82.6 160.973 1 50.73 ? O1D HEC 501 D 1 HETATM 43 O O2D HEC . . . BA 13 120.579 84.475 162.123 1 50.73 ? O2D HEC 501 D 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 78 _model_server_stats.query_time_ms 572 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #