data_6FO0
#
_model_server_result.job_id            IOjjpovHEInhJAYouZNWGA 
_model_server_result.datetime_utc      '2024-11-12 21:00:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fo0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":501}' 
#
_entry.id    6FO0 
#
_exptl.entry_id    6FO0 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          11 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6FO0 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FO0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    eicosameric 
_pdbx_struct_assembly.oligomeric_count      20 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 11 U N N 
? 11 V N N 
? 11 Y N N 
? 11 Z N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 217 R CYS 139 1_555 E SG CYS 236 R CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf2 H SG CYS 37 U CYS 24 1_555 H SG CYS 81 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 H SG CYS 53 U CYS 40 1_555 H SG CYS 67 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf4 O SG CYS 217 E CYS 139 1_555 O SG CYS 236 E CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf5 R SG CYS 37 H CYS 24 1_555 R SG CYS 81 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf6 R SG CYS 53 H CYS 40 1_555 R SG CYS 67 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc1 C NE2 HIS 97 P HIS 97 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? 
metalc ? metalc2 C NE2 HIS 182 P HIS 182 1_555 U FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? 
metalc ? metalc3 C NE2 HIS 196 P HIS 196 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? 
metalc ? metalc4 D NE2 HIS 125 Q HIS 41 1_555 X FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? 
metalc ? metalc5 M NE2 HIS 97 C HIS 97 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc6 M NE2 HIS 196 C HIS 196 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? 
metalc ? metalc7 N NE2 HIS 125 D HIS 41 1_555 BA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 259 n n 
CHA C4D HEM doub 260 n n 
CHA HHA HEM sing 261 n n 
CHB C4A HEM sing 262 n n 
CHB C1B HEM doub 263 n n 
CHB HHB HEM sing 264 n n 
CHC C4B HEM sing 265 n n 
CHC C1C HEM doub 266 n n 
CHC HHC HEM sing 267 n n 
CHD C4C HEM doub 268 n n 
CHD C1D HEM sing 269 n n 
CHD HHD HEM sing 270 n n 
C1A C2A HEM doub 271 n y 
C1A NA HEM sing 272 n y 
C2A C3A HEM sing 273 n y 
C2A CAA HEM sing 274 n n 
C3A C4A HEM doub 275 n y 
C3A CMA HEM sing 276 n n 
C4A NA HEM sing 277 n y 
CMA HMA HEM sing 278 n n 
CMA HMAA HEM sing 279 n n 
CMA HMAB HEM sing 280 n n 
CAA CBA HEM sing 281 n n 
CAA HAA HEM sing 282 n n 
CAA HAAA HEM sing 283 n n 
CBA CGA HEM sing 284 n n 
CBA HBA HEM sing 285 n n 
CBA HBAA HEM sing 286 n n 
CGA O1A HEM doub 287 n n 
CGA O2A HEM sing 288 n n 
C1B C2B HEM sing 289 n n 
C1B NB HEM sing 290 n n 
C2B C3B HEM doub 291 n n 
C2B CMB HEM sing 292 n n 
C3B C4B HEM sing 293 n n 
C3B CAB HEM sing 294 n n 
C4B NB HEM doub 295 n n 
CMB HMB HEM sing 296 n n 
CMB HMBA HEM sing 297 n n 
CMB HMBB HEM sing 298 n n 
CAB CBB HEM doub 299 n n 
CAB HAB HEM sing 300 n n 
CBB HBB HEM sing 301 n n 
CBB HBBA HEM sing 302 n n 
C1C C2C HEM sing 303 n y 
C1C NC HEM sing 304 n y 
C2C C3C HEM doub 305 n y 
C2C CMC HEM sing 306 n n 
C3C C4C HEM sing 307 n y 
C3C CAC HEM sing 308 n n 
C4C NC HEM sing 309 n y 
CMC HMC HEM sing 310 n n 
CMC HMCA HEM sing 311 n n 
CMC HMCB HEM sing 312 n n 
CAC CBC HEM doub 313 n n 
CAC HAC HEM sing 314 n n 
CBC HBC HEM sing 315 n n 
CBC HBCA HEM sing 316 n n 
C1D C2D HEM sing 317 n n 
C1D ND HEM doub 318 n n 
C2D C3D HEM doub 319 n n 
C2D CMD HEM sing 320 n n 
C3D C4D HEM sing 321 n n 
C3D CAD HEM sing 322 n n 
C4D ND HEM sing 323 n n 
CMD HMD HEM sing 324 n n 
CMD HMDA HEM sing 325 n n 
CMD HMDB HEM sing 326 n n 
CAD CBD HEM sing 327 n n 
CAD HAD HEM sing 328 n n 
CAD HADA HEM sing 329 n n 
CBD CGD HEM sing 330 n n 
CBD HBD HEM sing 331 n n 
CBD HBDA HEM sing 332 n n 
CGD O1D HEM doub 333 n n 
CGD O2D HEM sing 334 n n 
O2A H2A HEM sing 335 n n 
O2D H2D HEM sing 336 n n 
FE NA HEM sing 337 n n 
FE NB HEM sing 338 n n 
FE NC HEM sing 339 n n 
FE ND HEM sing 340 n n 
#
_atom_sites.entry_id                     6FO0 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
U 11 HEM P 1 501 501 HEM HEM . 
V 11 HEM P 1 502 502 HEM HEM . 
W 12 G8U P 1 503 503 G8U G8U . 
X 13 HEC Q 1 501 501 HEC HEC . 
Y 11 HEM C 1 501 501 HEM HEM . 
Z 11 HEM C 1 502 502 HEM HEM . 
AA 12 G8U C 1 503 503 G8U G8U . 
BA 13 HEC D 1 501 501 HEC HEC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . U 11 102.915 118.437 136.025 1 53.09 ? CHA HEM 501 P 1 
HETATM 2 C CHB HEM . . . U 11 100.014 118.757 132.171 1 53.09 ? CHB HEM 501 P 1 
HETATM 3 C CHC HEM . . . U 11 102.837 115.803 129.769 1 53.09 ? CHC HEM 501 P 1 
HETATM 4 C CHD HEM . . . U 11 105.059 114.686 133.867 1 53.09 ? CHD HEM 501 P 1 
HETATM 5 C C1A HEM . . . U 11 101.953 118.919 135.166 1 53.09 ? C1A HEM 501 P 1 
HETATM 6 C C2A HEM . . . U 11 101.101 120.094 135.293 1 53.09 ? C2A HEM 501 P 1 
HETATM 7 C C3A HEM . . . U 11 100.324 120.142 134.218 1 53.09 ? C3A HEM 501 P 1 
HETATM 8 C C4A HEM . . . U 11 100.624 119.025 133.373 1 53.09 ? C4A HEM 501 P 1 
HETATM 9 C CMA HEM . . . U 11 99.267 121.215 133.9 1 53.09 ? CMA HEM 501 P 1 
HETATM 10 C CAA HEM . . . U 11 101.022 121.176 136.389 1 53.09 ? CAA HEM 501 P 1 
HETATM 11 C CBA HEM . . . U 11 101.6 120.775 137.732 1 53.09 ? CBA HEM 501 P 1 
HETATM 12 C CGA HEM . . . U 11 102.109 122.029 138.378 1 53.09 ? CGA HEM 501 P 1 
HETATM 13 O O1A HEM . . . U 11 102.173 123.069 137.676 1 53.09 ? O1A HEM 501 P 1 
HETATM 14 O O2A HEM . . . U 11 102.449 121.992 139.585 1 53.09 ? O2A HEM 501 P 1 
HETATM 15 C C1B HEM . . . U 11 100.58 118.051 131.142 1 53.09 ? C1B HEM 501 P 1 
HETATM 16 C C2B HEM . . . U 11 100.216 118.111 129.727 1 53.09 ? C2B HEM 501 P 1 
HETATM 17 C C3B HEM . . . U 11 101.002 117.257 129.06 1 53.09 ? C3B HEM 501 P 1 
HETATM 18 C C4B HEM . . . U 11 101.895 116.716 130.037 1 53.09 ? C4B HEM 501 P 1 
HETATM 19 C CMB HEM . . . U 11 99.105 118.988 129.114 1 53.09 ? CMB HEM 501 P 1 
HETATM 20 C CAB HEM . . . U 11 101.115 116.922 127.55 1 53.09 ? CAB HEM 501 P 1 
HETATM 21 C CBB HEM . . . U 11 100.485 117.6 126.587 1 53.09 ? CBB HEM 501 P 1 
HETATM 22 C C1C HEM . . . U 11 103.709 115.356 130.698 1 53.09 ? C1C HEM 501 P 1 
HETATM 23 C C2C HEM . . . U 11 104.915 114.715 130.306 1 53.09 ? C2C HEM 501 P 1 
HETATM 24 C C3C HEM . . . U 11 105.569 114.38 131.412 1 53.09 ? C3C HEM 501 P 1 
HETATM 25 C C4C HEM . . . U 11 104.77 114.827 132.538 1 53.09 ? C4C HEM 501 P 1 
HETATM 26 C CMC HEM . . . U 11 105.251 114.507 128.813 1 53.09 ? CMC HEM 501 P 1 
HETATM 27 C CAC HEM . . . U 11 106.928 113.672 131.503 1 53.09 ? CAC HEM 501 P 1 
HETATM 28 C CBC HEM . . . U 11 107.714 113.476 130.441 1 53.09 ? CBC HEM 501 P 1 
HETATM 29 C C1D HEM . . . U 11 104.609 115.536 134.842 1 53.09 ? C1D HEM 501 P 1 
HETATM 30 C C2D HEM . . . U 11 104.827 115.406 136.263 1 53.09 ? C2D HEM 501 P 1 
HETATM 31 C C3D HEM . . . U 11 104.237 116.442 136.856 1 53.09 ? C3D HEM 501 P 1 
HETATM 32 C C4D HEM . . . U 11 103.627 117.27 135.836 1 53.09 ? C4D HEM 501 P 1 
HETATM 33 C CMD HEM . . . U 11 105.601 114.269 136.96 1 53.09 ? CMD HEM 501 P 1 
HETATM 34 C CAD HEM . . . U 11 104.215 116.725 138.365 1 53.09 ? CAD HEM 501 P 1 
HETATM 35 C CBD HEM . . . U 11 104.962 118.035 138.559 1 53.09 ? CBD HEM 501 P 1 
HETATM 36 C CGD HEM . . . U 11 104.02 119.075 139.089 1 53.09 ? CGD HEM 501 P 1 
HETATM 37 O O1D HEM . . . U 11 102.88 118.719 139.479 1 53.09 ? O1D HEM 501 P 1 
HETATM 38 O O2D HEM . . . U 11 104.413 120.265 139.125 1 53.09 ? O2D HEM 501 P 1 
HETATM 39 N NA HEM . . . U 11 101.614 118.293 133.985 1 53.09 ? NA HEM 501 P 1 
HETATM 40 N NB HEM . . . U 11 101.618 117.172 131.308 1 53.09 ? NB HEM 501 P 1 
HETATM 41 N NC HEM . . . U 11 103.627 115.428 132.065 1 53.09 ? NC HEM 501 P 1 
HETATM 42 N ND HEM . . . U 11 103.878 116.68 134.619 1 53.09 ? ND HEM 501 P 1 
HETATM 43 FE FE HEM . . . U 11 102.524 116.719 133.25 1 53.09 ? FE HEM 501 P 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    142 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           43 
#