data_6FO0 # _model_server_result.job_id luT1bDdlIeW1h4Ho6tkeZw _model_server_result.datetime_utc '2024-11-29 03:24:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":503}' # _entry.id 6FO0 # _exptl.entry_id 6FO0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 425.786 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FO0 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 12 W N N ? 12 AA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 217 R CYS 139 1_555 E SG CYS 236 R CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 H SG CYS 37 U CYS 24 1_555 H SG CYS 81 U CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 H SG CYS 53 U CYS 40 1_555 H SG CYS 67 U CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 O SG CYS 217 E CYS 139 1_555 O SG CYS 236 E CYS 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 R SG CYS 37 H CYS 24 1_555 R SG CYS 81 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf6 R SG CYS 53 H CYS 40 1_555 R SG CYS 67 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 C NE2 HIS 97 P HIS 97 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc2 C NE2 HIS 182 P HIS 182 1_555 U FE HEM . P HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc3 C NE2 HIS 196 P HIS 196 1_555 V FE HEM . P HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc4 D NE2 HIS 125 Q HIS 41 1_555 X FE HEC . Q HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc5 M NE2 HIS 97 C HIS 97 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc6 M NE2 HIS 196 C HIS 196 1_555 Z FE HEM . C HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc7 N NE2 HIS 125 D HIS 41 1_555 BA FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? # _chem_comp.formula 'C20 H15 Cl F3 N O4' _chem_comp.formula_weight 425.786 _chem_comp.id G8U _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloro-6-(hydroxymethyl)-2-methyl-5-{4-[3-(trifluoromethoxy)phenoxy]phenyl}pyridin-4-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 F1 G8U sing 83 n n C1 F2 G8U sing 84 n n C1 F3 G8U sing 85 n n C1 O29 G8U sing 86 n n C4 C5 G8U sing 87 n y C4 C9 G8U doub 88 n y C4 O29 G8U sing 89 n n C5 C6 G8U doub 90 n y C6 C7 G8U sing 91 n y C6 O10 G8U sing 92 n n C7 C8 G8U doub 93 n y C8 C9 G8U sing 94 n y O10 C11 G8U sing 95 n n C11 C12 G8U sing 96 n y C11 C16 G8U doub 97 n y C12 C13 G8U doub 98 n y C13 C14 G8U sing 99 n y C14 C15 G8U doub 100 n y C14 C17 G8U sing 101 n n C15 C16 G8U sing 102 n y C17 C18 G8U sing 103 n y C17 C22 G8U doub 104 n y C18 C19 G8U doub 105 n y C18 O23 G8U sing 106 n n C19 C20 G8U sing 107 n y C19 CL G8U sing 108 n n C20 C27 G8U sing 109 n n C20 N28 G8U doub 110 n y C22 C24 G8U sing 111 n n C22 N28 G8U sing 112 n y C24 O25 G8U sing 113 n n C5 H5 G8U sing 114 n n C9 H9 G8U sing 115 n n C7 H7 G8U sing 116 n n C8 H8 G8U sing 117 n n C12 H12 G8U sing 118 n n C16 H16 G8U sing 119 n n C13 H13 G8U sing 120 n n C15 H15 G8U sing 121 n n O23 H23 G8U sing 122 n n C27 H271 G8U sing 123 n n C27 H272 G8U sing 124 n n C27 H273 G8U sing 125 n n C24 H241 G8U sing 126 n n C24 H242 G8U sing 127 n n O25 H25 G8U sing 128 n n # _atom_sites.entry_id 6FO0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 11 HEM P 1 501 501 HEM HEM . V 11 HEM P 1 502 502 HEM HEM . W 12 G8U P 1 503 503 G8U G8U . X 13 HEC Q 1 501 501 HEC HEC . Y 11 HEM C 1 501 501 HEM HEM . Z 11 HEM C 1 502 502 HEM HEM . AA 12 G8U C 1 503 503 G8U G8U . BA 13 HEC D 1 501 501 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G8U . . . AA 12 106.388 97.554 115.788 1 69.9 ? C1 G8U 503 C 1 HETATM 2 F F1 G8U . . . AA 12 106.482 97.758 117.131 1 69.9 ? F1 G8U 503 C 1 HETATM 3 F F2 G8U . . . AA 12 107.212 98.421 115.133 1 69.9 ? F2 G8U 503 C 1 HETATM 4 F F3 G8U . . . AA 12 105.101 97.767 115.384 1 69.9 ? F3 G8U 503 C 1 HETATM 5 C C4 G8U . . . AA 12 105.823 95.439 114.905 1 69.9 ? C4 G8U 503 C 1 HETATM 6 C C5 G8U . . . AA 12 105.739 95.381 113.529 1 69.9 ? C5 G8U 503 C 1 HETATM 7 C C6 G8U . . . AA 12 104.8 94.559 112.931 1 69.9 ? C6 G8U 503 C 1 HETATM 8 C C7 G8U . . . AA 12 103.918 93.826 113.709 1 69.9 ? C7 G8U 503 C 1 HETATM 9 C C8 G8U . . . AA 12 104 93.884 115.089 1 69.9 ? C8 G8U 503 C 1 HETATM 10 C C9 G8U . . . AA 12 104.954 94.692 115.684 1 69.9 ? C9 G8U 503 C 1 HETATM 11 O O10 G8U . . . AA 12 104.686 94.521 111.539 1 69.9 ? O10 G8U 503 C 1 HETATM 12 C C11 G8U . . . AA 12 105.543 93.694 110.801 1 69.9 ? C11 G8U 503 C 1 HETATM 13 C C12 G8U . . . AA 12 104.966 92.939 109.803 1 69.9 ? C12 G8U 503 C 1 HETATM 14 C C13 G8U . . . AA 12 105.733 92.117 109.008 1 69.9 ? C13 G8U 503 C 1 HETATM 15 C C14 G8U . . . AA 12 107.091 92.045 109.193 1 69.9 ? C14 G8U 503 C 1 HETATM 16 C C15 G8U . . . AA 12 107.681 92.81 110.177 1 69.9 ? C15 G8U 503 C 1 HETATM 17 C C16 G8U . . . AA 12 106.912 93.637 110.98 1 69.9 ? C16 G8U 503 C 1 HETATM 18 C C17 G8U . . . AA 12 107.899 91.134 108.282 1 69.9 ? C17 G8U 503 C 1 HETATM 19 C C18 G8U . . . AA 12 107.986 89.777 108.514 1 69.9 ? C18 G8U 503 C 1 HETATM 20 C C19 G8U . . . AA 12 108.735 89.025 107.626 1 69.9 ? C19 G8U 503 C 1 HETATM 21 C C20 G8U . . . AA 12 109.349 89.637 106.551 1 69.9 ? C20 G8U 503 C 1 HETATM 22 C C22 G8U . . . AA 12 108.535 91.682 107.182 1 69.9 ? C22 G8U 503 C 1 HETATM 23 O O23 G8U . . . AA 12 107.352 89.188 109.611 1 69.9 ? O23 G8U 503 C 1 HETATM 24 C C24 G8U . . . AA 12 108.43 93.178 106.921 1 69.9 ? C24 G8U 503 C 1 HETATM 25 O O25 G8U . . . AA 12 109.079 93.446 105.709 1 69.9 ? O25 G8U 503 C 1 HETATM 26 CL CL G8U . . . AA 12 108.904 87.268 107.866 1 69.9 ? CL G8U 503 C 1 HETATM 27 C C27 G8U . . . AA 12 110.169 88.802 105.581 1 69.9 ? C27 G8U 503 C 1 HETATM 28 N N28 G8U . . . AA 12 109.233 90.931 106.362 1 69.9 ? N28 G8U 503 C 1 HETATM 29 O O29 G8U . . . AA 12 106.794 96.25 115.499 1 69.9 ? O29 G8U 503 C 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 76 _model_server_stats.query_time_ms 413 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 29 #