data_6FO7
#
_model_server_result.job_id            O72CNlC0za0kP8MkbbZugQ 
_model_server_result.datetime_utc      '2025-01-03 00:55:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fo7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":4000}' 
#
_entry.id    6FO7 
#
_exptl.entry_id    6FO7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              426.631 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]hept-2-enylidene]cyclohexane-1,3-diol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FO7 
_cell.length_a            66.25 
_cell.length_b            66.25 
_cell.length_c            262.9 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FO7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 33.125 57.374183 43.816667 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H42 O3' 
_chem_comp.formula_weight    426.631 
_chem_comp.id                LX3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]hept-2-enylidene]cyclohexane-1,3-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C10 LX3 sing 194 n n 
C11 C10 LX3 sing 195 n n 
C10 C13 LX3 sing 196 n n 
C10 O9 LX3 sing 197 n n 
C13 C14 LX3 sing 198 n n 
C14 C15 LX3 sing 199 n n 
C4 C5 LX3 sing 200 n n 
C15 C16 LX3 sing 201 n n 
C16 C17 LX3 sing 202 n n 
C28 C27 LX3 doub 203 n n 
C6 C5 LX3 sing 204 n n 
C6 C7 LX3 sing 205 n n 
C27 C26 LX3 sing 206 n n 
C27 C29 LX3 sing 207 n n 
C34 C26 LX3 sing 208 n n 
C34 C32 LX3 sing 209 n n 
C31 C32 LX3 sing 210 n n 
C31 C29 LX3 sing 211 n n 
O30 C29 LX3 sing 212 n n 
C26 C25 LX3 doub 213 z n 
C17 C18 LX3 sing 214 n n 
C32 O33 LX3 sing 215 n n 
C25 C24 LX3 sing 216 n n 
C19 C18 LX3 doub 217 n y 
C19 C23 LX3 sing 218 n y 
C24 C8 LX3 doub 219 e n 
C7 C8 LX3 sing 220 n n 
C8 C23 LX3 sing 221 n n 
C18 C20 LX3 sing 222 n y 
C23 C22 LX3 doub 223 n y 
C20 C21 LX3 doub 224 n y 
C22 C21 LX3 sing 225 n y 
C4 H1 LX3 sing 226 n n 
C4 H2 LX3 sing 227 n n 
C4 H3 LX3 sing 228 n n 
C5 H4 LX3 sing 229 n n 
C5 H5 LX3 sing 230 n n 
C6 H6 LX3 sing 231 n n 
C6 H7 LX3 sing 232 n n 
C7 H8 LX3 sing 233 n n 
C7 H9 LX3 sing 234 n n 
O9 H10 LX3 sing 235 n n 
C11 H11 LX3 sing 236 n n 
C11 H12 LX3 sing 237 n n 
C11 H13 LX3 sing 238 n n 
C12 H14 LX3 sing 239 n n 
C12 H15 LX3 sing 240 n n 
C12 H16 LX3 sing 241 n n 
C13 H17 LX3 sing 242 n n 
C13 H18 LX3 sing 243 n n 
C14 H19 LX3 sing 244 n n 
C14 H20 LX3 sing 245 n n 
C15 H21 LX3 sing 246 n n 
C15 H22 LX3 sing 247 n n 
C16 H23 LX3 sing 248 n n 
C16 H24 LX3 sing 249 n n 
C17 H25 LX3 sing 250 n n 
C17 H26 LX3 sing 251 n n 
C19 H27 LX3 sing 252 n n 
C20 H28 LX3 sing 253 n n 
C21 H29 LX3 sing 254 n n 
C22 H30 LX3 sing 255 n n 
C24 H31 LX3 sing 256 n n 
C25 H32 LX3 sing 257 n n 
C28 H33 LX3 sing 258 n n 
C28 H34 LX3 sing 259 n n 
C29 H35 LX3 sing 260 n n 
O30 H36 LX3 sing 261 n n 
C31 H37 LX3 sing 262 n n 
C31 H38 LX3 sing 263 n n 
C32 H39 LX3 sing 264 n n 
O33 H40 LX3 sing 265 n n 
C34 H41 LX3 sing 266 n n 
C34 H42 LX3 sing 267 n n 
#
_atom_sites.entry_id                     6FO7 
_atom_sites.fract_transf_matrix[1][1]    0.015094 
_atom_sites.fract_transf_matrix[1][2]    0.008715 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017429 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003804 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 LX3 A 1 4000 4000 LX3 LX3 . 
D 4 HOH A 1 4101 67 HOH HOH . 
D 4 HOH A 2 4102 14 HOH HOH . 
D 4 HOH A 3 4103 3 HOH HOH . 
D 4 HOH A 4 4104 6 HOH HOH . 
D 4 HOH A 5 4105 11 HOH HOH . 
D 4 HOH A 6 4106 8 HOH HOH . 
D 4 HOH A 7 4107 66 HOH HOH . 
D 4 HOH A 8 4108 2 HOH HOH . 
D 4 HOH A 9 4109 13 HOH HOH . 
D 4 HOH A 10 4110 64 HOH HOH . 
D 4 HOH A 11 4111 33 HOH HOH . 
D 4 HOH A 12 4112 21 HOH HOH . 
D 4 HOH A 13 4113 28 HOH HOH . 
D 4 HOH A 14 4114 18 HOH HOH . 
D 4 HOH A 15 4115 5 HOH HOH . 
D 4 HOH A 16 4116 44 HOH HOH . 
D 4 HOH A 17 4117 12 HOH HOH . 
D 4 HOH A 18 4118 1 HOH HOH . 
D 4 HOH A 19 4119 60 HOH HOH . 
D 4 HOH A 20 4120 43 HOH HOH . 
D 4 HOH A 21 4121 37 HOH HOH . 
D 4 HOH A 22 4122 63 HOH HOH . 
D 4 HOH A 23 4123 39 HOH HOH . 
D 4 HOH A 24 4124 23 HOH HOH . 
D 4 HOH A 25 4125 15 HOH HOH . 
D 4 HOH A 26 4126 7 HOH HOH . 
D 4 HOH A 27 4127 17 HOH HOH . 
D 4 HOH A 28 4128 24 HOH HOH . 
D 4 HOH A 29 4129 62 HOH HOH . 
D 4 HOH A 30 4130 34 HOH HOH . 
D 4 HOH A 31 4131 29 HOH HOH . 
D 4 HOH A 32 4132 45 HOH HOH . 
D 4 HOH A 33 4133 16 HOH HOH . 
D 4 HOH A 34 4134 10 HOH HOH . 
D 4 HOH A 35 4135 25 HOH HOH . 
D 4 HOH A 36 4136 52 HOH HOH . 
D 4 HOH A 37 4137 19 HOH HOH . 
D 4 HOH A 38 4138 50 HOH HOH . 
D 4 HOH A 39 4139 31 HOH HOH . 
D 4 HOH A 40 4140 49 HOH HOH . 
D 4 HOH A 41 4141 20 HOH HOH . 
D 4 HOH A 42 4142 61 HOH HOH . 
D 4 HOH A 43 4143 65 HOH HOH . 
D 4 HOH A 44 4144 9 HOH HOH . 
D 4 HOH A 45 4145 47 HOH HOH . 
D 4 HOH A 46 4146 59 HOH HOH . 
D 4 HOH A 47 4147 46 HOH HOH . 
D 4 HOH A 48 4148 42 HOH HOH . 
D 4 HOH A 49 4149 4 HOH HOH . 
D 4 HOH A 50 4150 40 HOH HOH . 
D 4 HOH A 51 4151 30 HOH HOH . 
D 4 HOH A 52 4152 35 HOH HOH . 
D 4 HOH A 53 4153 27 HOH HOH . 
D 4 HOH A 54 4154 55 HOH HOH . 
D 4 HOH A 55 4155 57 HOH HOH . 
D 4 HOH A 56 4156 26 HOH HOH . 
D 4 HOH A 57 4157 36 HOH HOH . 
D 4 HOH A 58 4158 48 HOH HOH . 
D 4 HOH A 59 4159 54 HOH HOH . 
D 4 HOH A 60 4160 56 HOH HOH . 
D 4 HOH A 61 4161 32 HOH HOH . 
E 4 HOH B 1 801 41 HOH HOH . 
E 4 HOH B 2 802 22 HOH HOH . 
E 4 HOH B 3 803 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 LX3 . . . C 3 -3.964 34.094 36.21 1 81.54 ? C4 LX3 4000 A 1 
HETATM 2 C C5 LX3 . . . C 3 -3.462 34.57 37.523 1 77.79 ? C5 LX3 4000 A 1 
HETATM 3 C C6 LX3 . . . C 3 -2.078 35.139 37.463 1 71.7 ? C6 LX3 4000 A 1 
HETATM 4 C C7 LX3 . . . C 3 -1.488 35.187 38.86 1 71.61 ? C7 LX3 4000 A 1 
HETATM 5 C C8 LX3 . . . C 3 -0.031 35.538 38.915 1 70.7 ? C8 LX3 4000 A 1 
HETATM 6 O O9 LX3 . . . C 3 4.813 28.535 34.079 1 66.38 ? O9 LX3 4000 A 1 
HETATM 7 C C10 LX3 . . . C 3 4.313 29.596 33.238 1 67.58 ? C10 LX3 4000 A 1 
HETATM 8 C C11 LX3 . . . C 3 5.439 30.587 32.987 1 68.17 ? C11 LX3 4000 A 1 
HETATM 9 C C12 LX3 . . . C 3 3.86 28.987 31.925 1 61.4 ? C12 LX3 4000 A 1 
HETATM 10 C C13 LX3 . . . C 3 3.128 30.248 33.961 1 71.23 ? C13 LX3 4000 A 1 
HETATM 11 C C14 LX3 . . . C 3 3.388 31.045 35.235 1 74.12 ? C14 LX3 4000 A 1 
HETATM 12 C C15 LX3 . . . C 3 2.937 30.35 36.509 1 79.86 ? C15 LX3 4000 A 1 
HETATM 13 C C16 LX3 . . . C 3 1.488 30.582 36.897 1 80.33 ? C16 LX3 4000 A 1 
HETATM 14 C C17 LX3 . . . C 3 1.272 30.713 38.4 1 79.09 ? C17 LX3 4000 A 1 
HETATM 15 C C18 LX3 . . . C 3 1.571 32.099 38.915 1 78.46 ? C18 LX3 4000 A 1 
HETATM 16 C C19 LX3 . . . C 3 0.658 33.135 38.722 1 77.72 ? C19 LX3 4000 A 1 
HETATM 17 C C20 LX3 . . . C 3 2.778 32.378 39.541 1 78.28 ? C20 LX3 4000 A 1 
HETATM 18 C C21 LX3 . . . C 3 3.084 33.665 39.947 1 77.16 ? C21 LX3 4000 A 1 
HETATM 19 C C22 LX3 . . . C 3 2.183 34.692 39.734 1 75.66 ? C22 LX3 4000 A 1 
HETATM 20 C C23 LX3 . . . C 3 0.955 34.438 39.123 1 74.9 ? C23 LX3 4000 A 1 
HETATM 21 C C24 LX3 . . . C 3 0.461 36.8 38.797 1 65.8 ? C24 LX3 4000 A 1 
HETATM 22 C C25 LX3 . . . C 3 -0.247 38.034 38.593 1 63.92 ? C25 LX3 4000 A 1 
HETATM 23 C C26 LX3 . . . C 3 0.291 39.239 38.247 1 58.81 ? C26 LX3 4000 A 1 
HETATM 24 C C27 LX3 . . . C 3 1.724 39.391 37.966 1 56.18 ? C27 LX3 4000 A 1 
HETATM 25 C C28 LX3 . . . C 3 2.357 38.532 37.186 1 56.37 ? C28 LX3 4000 A 1 
HETATM 26 C C29 LX3 . . . C 3 2.303 40.643 38.585 1 55.9 ? C29 LX3 4000 A 1 
HETATM 27 O O30 LX3 . . . C 3 3.683 40.754 38.216 1 57.77 ? O30 LX3 4000 A 1 
HETATM 28 C C31 LX3 . . . C 3 1.513 41.826 38.038 1 54.14 ? C31 LX3 4000 A 1 
HETATM 29 C C32 LX3 . . . C 3 0.075 41.76 38.519 1 57.09 ? C32 LX3 4000 A 1 
HETATM 30 O O33 LX3 . . . C 3 0.065 41.807 39.947 1 63.2 ? O33 LX3 4000 A 1 
HETATM 31 C C34 LX3 . . . C 3 -0.57 40.471 38.033 1 57.79 ? C34 LX3 4000 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#