data_6FO9 # _model_server_result.job_id 4gdAY5O9h91BzvGwaw_klA _model_server_result.datetime_utc '2025-01-02 21:47:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fo9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 6FO9 # _exptl.entry_id 6FO9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 412.605 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]hex-2-enylidene]cyclohexane-1,3-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6FO9 _cell.length_a 66.01 _cell.length_b 66.01 _cell.length_c 264.46 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FO9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 33.005 57.166337 44.076667 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H40 O3' _chem_comp.formula_weight 412.605 _chem_comp.id E0E _chem_comp.mon_nstd_flag . _chem_comp.name (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]hex-2-enylidene]cyclohexane-1,3-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 E0E sing 83 n n C12 C10 E0E sing 84 n n C10 C13 E0E sing 85 n n C10 O9 E0E sing 86 n n C13 C14 E0E sing 87 n n C14 C15 E0E sing 88 n n C15 C16 E0E sing 89 n n C5 C6 E0E sing 90 n n C16 C17 E0E sing 91 n n C28 C27 E0E doub 92 n n C6 C7 E0E sing 93 n n C34 C26 E0E sing 94 n n C34 C32 E0E sing 95 n n C27 C26 E0E sing 96 n n C27 C29 E0E sing 97 n n C31 C32 E0E sing 98 n n C31 C29 E0E sing 99 n n C26 C25 E0E doub 100 z n C17 C18 E0E sing 101 n n O30 C29 E0E sing 102 n n C25 C24 E0E sing 103 n n C32 O33 E0E sing 104 n n C19 C18 E0E doub 105 n y C19 C23 E0E sing 106 n y C18 C20 E0E sing 107 n y C24 C8 E0E doub 108 e n C8 C7 E0E sing 109 n n C8 C23 E0E sing 110 n n C23 C22 E0E doub 111 n y C20 C21 E0E doub 112 n y C22 C21 E0E sing 113 n y C5 H1 E0E sing 114 n n C5 H2 E0E sing 115 n n C5 H3 E0E sing 116 n n C6 H4 E0E sing 117 n n C6 H5 E0E sing 118 n n C7 H6 E0E sing 119 n n C7 H7 E0E sing 120 n n O9 H8 E0E sing 121 n n C11 H9 E0E sing 122 n n C11 H10 E0E sing 123 n n C11 H11 E0E sing 124 n n C12 H12 E0E sing 125 n n C12 H13 E0E sing 126 n n C12 H14 E0E sing 127 n n C13 H15 E0E sing 128 n n C13 H16 E0E sing 129 n n C14 H17 E0E sing 130 n n C14 H18 E0E sing 131 n n C15 H19 E0E sing 132 n n C15 H20 E0E sing 133 n n C16 H21 E0E sing 134 n n C16 H22 E0E sing 135 n n C17 H23 E0E sing 136 n n C17 H24 E0E sing 137 n n C19 H25 E0E sing 138 n n C20 H26 E0E sing 139 n n C21 H27 E0E sing 140 n n C22 H28 E0E sing 141 n n C24 H29 E0E sing 142 n n C25 H30 E0E sing 143 n n C28 H31 E0E sing 144 n n C28 H32 E0E sing 145 n n C29 H33 E0E sing 146 n n O30 H34 E0E sing 147 n n C31 H35 E0E sing 148 n n C31 H36 E0E sing 149 n n C32 H37 E0E sing 150 n n O33 H38 E0E sing 151 n n C34 H39 E0E sing 152 n n C34 H40 E0E sing 153 n n # _atom_sites.entry_id 6FO9 _atom_sites.fract_transf_matrix[1][1] 0.015149 _atom_sites.fract_transf_matrix[1][2] 0.008746 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003781 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 E0E A 1 500 500 E0E LX2 . D 4 HOH A 1 601 6 HOH HOH . D 4 HOH A 2 602 31 HOH HOH . D 4 HOH A 3 603 2 HOH HOH . D 4 HOH A 4 604 74 HOH HOH . D 4 HOH A 5 605 7 HOH HOH . D 4 HOH A 6 606 42 HOH HOH . D 4 HOH A 7 607 4 HOH HOH . D 4 HOH A 8 608 58 HOH HOH . D 4 HOH A 9 609 3 HOH HOH . D 4 HOH A 10 610 11 HOH HOH . D 4 HOH A 11 611 53 HOH HOH . D 4 HOH A 12 612 44 HOH HOH . D 4 HOH A 13 613 50 HOH HOH . D 4 HOH A 14 614 30 HOH HOH . E 4 HOH B 1 801 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 E0E . . . C 3 -1.844 34.502 36.839 1 76.24 ? C5 E0E 500 A 1 HETATM 2 C C6 E0E . . . C 3 -1.73 33.534 37.985 1 70.69 ? C6 E0E 500 A 1 HETATM 3 C C7 E0E . . . C 3 -0.91 34.069 39.153 1 75.08 ? C7 E0E 500 A 1 HETATM 4 C C8 E0E . . . C 3 0.539 34.461 39.121 1 70.83 ? C8 E0E 500 A 1 HETATM 5 O O9 E0E . . . C 3 5.236 27.763 34.113 1 88.23 ? O9 E0E 500 A 1 HETATM 6 C C10 E0E . . . C 3 4.77 28.831 33.267 1 82.28 ? C10 E0E 500 A 1 HETATM 7 C C11 E0E . . . C 3 4.461 28.24 31.9 1 87.2 ? C11 E0E 500 A 1 HETATM 8 C C12 E0E . . . C 3 5.88 29.868 33.166 1 76.34 ? C12 E0E 500 A 1 HETATM 9 C C13 E0E . . . C 3 3.518 29.419 33.913 1 85.13 ? C13 E0E 500 A 1 HETATM 10 C C14 E0E . . . C 3 3.828 30.213 35.178 1 90.25 ? C14 E0E 500 A 1 HETATM 11 C C15 E0E . . . C 3 3.567 29.454 36.47 1 105.83 ? C15 E0E 500 A 1 HETATM 12 C C16 E0E . . . C 3 2.12 29.482 36.935 1 102.92 ? C16 E0E 500 A 1 HETATM 13 C C17 E0E . . . C 3 1.949 29.699 38.444 1 96.9 ? C17 E0E 500 A 1 HETATM 14 C C18 E0E . . . C 3 2.254 31.1 38.925 1 88.35 ? C18 E0E 500 A 1 HETATM 15 C C19 E0E . . . C 3 1.289 32.092 38.849 1 84.83 ? C19 E0E 500 A 1 HETATM 16 C C20 E0E . . . C 3 3.506 31.418 39.435 1 75.85 ? C20 E0E 500 A 1 HETATM 17 C C21 E0E . . . C 3 3.786 32.706 39.858 1 81.04 ? C21 E0E 500 A 1 HETATM 18 C C22 E0E . . . C 3 2.822 33.688 39.773 1 76.81 ? C22 E0E 500 A 1 HETATM 19 C C23 E0E . . . C 3 1.561 33.399 39.263 1 73.34 ? C23 E0E 500 A 1 HETATM 20 C C24 E0E . . . C 3 1.011 35.722 38.941 1 64.44 ? C24 E0E 500 A 1 HETATM 21 C C25 E0E . . . C 3 0.277 36.921 38.711 1 55.76 ? C25 E0E 500 A 1 HETATM 22 C C26 E0E . . . C 3 0.769 38.151 38.384 1 58.53 ? C26 E0E 500 A 1 HETATM 23 C C27 E0E . . . C 3 2.193 38.457 38.183 1 59.77 ? C27 E0E 500 A 1 HETATM 24 C C28 E0E . . . C 3 2.998 37.68 37.485 1 70.75 ? C28 E0E 500 A 1 HETATM 25 C C29 E0E . . . C 3 2.635 39.743 38.84 1 64.01 ? C29 E0E 500 A 1 HETATM 26 O O30 E0E . . . C 3 3.988 39.996 38.474 1 64.33 ? O30 E0E 500 A 1 HETATM 27 C C31 E0E . . . C 3 1.743 40.869 38.341 1 56.85 ? C31 E0E 500 A 1 HETATM 28 C C32 E0E . . . C 3 0.326 40.595 38.797 1 56.32 ? C32 E0E 500 A 1 HETATM 29 O O33 E0E . . . C 3 0.292 40.488 40.222 1 65.9 ? O33 E0E 500 A 1 HETATM 30 C C34 E0E . . . C 3 -0.172 39.313 38.163 1 63.12 ? C34 E0E 500 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 30 #