data_6FOB
#
_model_server_result.job_id            ltp3eefD6R_S58MwMrv9Xw 
_model_server_result.datetime_utc      '2025-01-02 22:28:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fob 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6FOB 
#
_exptl.entry_id    6FOB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              468.711 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]dec-2-enylidene]cyclohexane-1,3-diol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6FOB 
_cell.length_a            66.22 
_cell.length_b            66.22 
_cell.length_c            264.2 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FOB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 33.11 57.348202 44.033333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C31 H48 O3' 
_chem_comp.formula_weight    468.711 
_chem_comp.id                DZW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1~{R},3~{S},5~{Z})-4-methylidene-5-[(~{E})-3-[3-(6-methyl-6-oxidanyl-heptyl)phenyl]dec-2-enylidene]cyclohexane-1,3-diol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C10 DZW sing 83 n n 
C1 C2 DZW sing 84 n n 
C10 C11 DZW sing 85 n n 
C10 O9 DZW sing 86 n n 
C10 C13 DZW sing 87 n n 
C2 C3 DZW sing 88 n n 
C13 C14 DZW sing 89 n n 
C3 C4 DZW sing 90 n n 
C14 C15 DZW sing 91 n n 
C4 C5 DZW sing 92 n n 
C15 C16 DZW sing 93 n n 
C5 C6 DZW sing 94 n n 
C16 C17 DZW sing 95 n n 
C28 C27 DZW doub 96 n n 
C6 C7 DZW sing 97 n n 
C27 C26 DZW sing 98 n n 
C27 C29 DZW sing 99 n n 
C34 C26 DZW sing 100 n n 
C34 C32 DZW sing 101 n n 
O30 C29 DZW sing 102 n n 
C17 C18 DZW sing 103 n n 
C31 C29 DZW sing 104 n n 
C31 C32 DZW sing 105 n n 
C26 C25 DZW doub 106 z n 
C32 O33 DZW sing 107 n n 
C19 C18 DZW doub 108 n y 
C19 C23 DZW sing 109 n y 
C25 C24 DZW sing 110 n n 
C7 C8 DZW sing 111 n n 
C18 C20 DZW sing 112 n y 
C24 C8 DZW doub 113 e n 
C8 C23 DZW sing 114 n n 
C23 C22 DZW doub 115 n y 
C20 C21 DZW doub 116 n y 
C22 C21 DZW sing 117 n y 
C1 H1 DZW sing 118 n n 
C1 H2 DZW sing 119 n n 
C1 H3 DZW sing 120 n n 
C2 H4 DZW sing 121 n n 
C2 H5 DZW sing 122 n n 
C3 H6 DZW sing 123 n n 
C3 H7 DZW sing 124 n n 
C4 H8 DZW sing 125 n n 
C4 H9 DZW sing 126 n n 
C5 H10 DZW sing 127 n n 
C5 H11 DZW sing 128 n n 
C6 H12 DZW sing 129 n n 
C6 H13 DZW sing 130 n n 
C7 H14 DZW sing 131 n n 
C7 H15 DZW sing 132 n n 
O9 H16 DZW sing 133 n n 
C11 H17 DZW sing 134 n n 
C11 H18 DZW sing 135 n n 
C11 H19 DZW sing 136 n n 
C12 H20 DZW sing 137 n n 
C12 H21 DZW sing 138 n n 
C12 H22 DZW sing 139 n n 
C13 H23 DZW sing 140 n n 
C13 H24 DZW sing 141 n n 
C14 H25 DZW sing 142 n n 
C14 H26 DZW sing 143 n n 
C15 H27 DZW sing 144 n n 
C15 H28 DZW sing 145 n n 
C16 H29 DZW sing 146 n n 
C16 H30 DZW sing 147 n n 
C17 H31 DZW sing 148 n n 
C17 H32 DZW sing 149 n n 
C19 H33 DZW sing 150 n n 
C20 H34 DZW sing 151 n n 
C21 H35 DZW sing 152 n n 
C22 H36 DZW sing 153 n n 
C24 H37 DZW sing 154 n n 
C25 H38 DZW sing 155 n n 
C28 H39 DZW sing 156 n n 
C28 H40 DZW sing 157 n n 
C29 H41 DZW sing 158 n n 
O30 H42 DZW sing 159 n n 
C31 H43 DZW sing 160 n n 
C31 H44 DZW sing 161 n n 
C32 H45 DZW sing 162 n n 
O33 H46 DZW sing 163 n n 
C34 H47 DZW sing 164 n n 
C34 H48 DZW sing 165 n n 
#
_atom_sites.entry_id                     6FOB 
_atom_sites.fract_transf_matrix[1][1]    0.015101 
_atom_sites.fract_transf_matrix[1][2]    0.008719 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017437 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003785 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 DZW A 1 501 1 DZW LX5 . 
D 4 HOH A 1 601 28 HOH HOH . 
D 4 HOH A 2 602 38 HOH HOH . 
D 4 HOH A 3 603 13 HOH HOH . 
D 4 HOH A 4 604 18 HOH HOH . 
D 4 HOH A 5 605 6 HOH HOH . 
D 4 HOH A 6 606 2 HOH HOH . 
D 4 HOH A 7 607 45 HOH HOH . 
D 4 HOH A 8 608 4 HOH HOH . 
D 4 HOH A 9 609 33 HOH HOH . 
D 4 HOH A 10 610 7 HOH HOH . 
D 4 HOH A 11 611 14 HOH HOH . 
D 4 HOH A 12 612 9 HOH HOH . 
D 4 HOH A 13 613 32 HOH HOH . 
D 4 HOH A 14 614 26 HOH HOH . 
D 4 HOH A 15 615 35 HOH HOH . 
D 4 HOH A 16 616 25 HOH HOH . 
D 4 HOH A 17 617 37 HOH HOH . 
D 4 HOH A 18 618 20 HOH HOH . 
D 4 HOH A 19 619 34 HOH HOH . 
D 4 HOH A 20 620 43 HOH HOH . 
D 4 HOH A 21 621 1 HOH HOH . 
D 4 HOH A 22 622 24 HOH HOH . 
D 4 HOH A 23 623 21 HOH HOH . 
D 4 HOH A 24 624 3 HOH HOH . 
D 4 HOH A 25 625 36 HOH HOH . 
D 4 HOH A 26 626 31 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 12 HOH HOH . 
D 4 HOH A 29 629 42 HOH HOH . 
D 4 HOH A 30 630 15 HOH HOH . 
D 4 HOH A 31 631 17 HOH HOH . 
D 4 HOH A 32 632 40 HOH HOH . 
D 4 HOH A 33 633 39 HOH HOH . 
D 4 HOH A 34 634 5 HOH HOH . 
D 4 HOH A 35 635 10 HOH HOH . 
D 4 HOH A 36 636 8 HOH HOH . 
D 4 HOH A 37 637 46 HOH HOH . 
D 4 HOH A 38 638 30 HOH HOH . 
D 4 HOH A 39 639 19 HOH HOH . 
D 4 HOH A 40 640 41 HOH HOH . 
D 4 HOH A 41 641 11 HOH HOH . 
D 4 HOH A 42 642 44 HOH HOH . 
D 4 HOH A 43 643 16 HOH HOH . 
E 4 HOH B 1 801 29 HOH HOH . 
E 4 HOH B 2 802 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DZW . . . C 3 -3.137 31.709 32.57 1 80.05 ? C1 DZW 501 A 1 
HETATM 2 C C2 DZW . . . C 3 -3.004 32.963 33.327 1 80.16 ? C2 DZW 501 A 1 
HETATM 3 C C3 DZW . . . C 3 -2.765 32.694 34.793 1 79.77 ? C3 DZW 501 A 1 
HETATM 4 C C4 DZW . . . C 3 -2.905 33.936 35.644 1 76.3 ? C4 DZW 501 A 1 
HETATM 5 C C5 DZW . . . C 3 -2.658 33.728 37.12 1 72 ? C5 DZW 501 A 1 
HETATM 6 C C6 DZW . . . C 3 -1.219 34.012 37.438 1 68.8 ? C6 DZW 501 A 1 
HETATM 7 C C7 DZW . . . C 3 -0.934 34.144 38.917 1 66.53 ? C7 DZW 501 A 1 
HETATM 8 C C8 DZW . . . C 3 0.495 34.536 39.169 1 64.79 ? C8 DZW 501 A 1 
HETATM 9 O O9 DZW . . . C 3 5.621 27.647 33.897 1 65.6 ? O9 DZW 501 A 1 
HETATM 10 C C10 DZW . . . C 3 5.47 28.947 33.303 1 64.66 ? C10 DZW 501 A 1 
HETATM 11 C C11 DZW . . . C 3 6.834 29.62 33.312 1 66.72 ? C11 DZW 501 A 1 
HETATM 12 C C12 DZW . . . C 3 4.975 28.754 31.881 1 63.73 ? C12 DZW 501 A 1 
HETATM 13 C C13 DZW . . . C 3 4.455 29.716 34.127 1 62.46 ? C13 DZW 501 A 1 
HETATM 14 C C14 DZW . . . C 3 4.728 29.992 35.599 1 62.54 ? C14 DZW 501 A 1 
HETATM 15 C C15 DZW . . . C 3 3.469 30.391 36.351 1 64.9 ? C15 DZW 501 A 1 
HETATM 16 C C16 DZW . . . C 3 2.911 29.319 37.281 1 66.07 ? C16 DZW 501 A 1 
HETATM 17 C C17 DZW . . . C 3 1.849 29.789 38.291 1 65.54 ? C17 DZW 501 A 1 
HETATM 18 C C18 DZW . . . C 3 2.11 31.112 38.972 1 64.94 ? C18 DZW 501 A 1 
HETATM 19 C C19 DZW . . . C 3 1.211 32.163 38.812 1 64.99 ? C19 DZW 501 A 1 
HETATM 20 C C20 DZW . . . C 3 3.261 31.327 39.719 1 66.57 ? C20 DZW 501 A 1 
HETATM 21 C C21 DZW . . . C 3 3.515 32.565 40.291 1 68.61 ? C21 DZW 501 A 1 
HETATM 22 C C22 DZW . . . C 3 2.613 33.603 40.133 1 66.81 ? C22 DZW 501 A 1 
HETATM 23 C C23 DZW . . . C 3 1.452 33.415 39.383 1 65.64 ? C23 DZW 501 A 1 
HETATM 24 C C24 DZW . . . C 3 0.972 35.821 39.111 1 61.93 ? C24 DZW 501 A 1 
HETATM 25 C C25 DZW . . . C 3 0.253 37.04 38.816 1 60.29 ? C25 DZW 501 A 1 
HETATM 26 C C26 DZW . . . C 3 0.752 38.243 38.411 1 61.09 ? C26 DZW 501 A 1 
HETATM 27 C C27 DZW . . . C 3 2.153 38.552 38.085 1 61.8 ? C27 DZW 501 A 1 
HETATM 28 C C28 DZW . . . C 3 2.871 37.738 37.335 1 63.28 ? C28 DZW 501 A 1 
HETATM 29 C C29 DZW . . . C 3 2.632 39.852 38.687 1 62.08 ? C29 DZW 501 A 1 
HETATM 30 O O30 DZW . . . C 3 3.942 40.116 38.223 1 64.06 ? O30 DZW 501 A 1 
HETATM 31 C C31 DZW . . . C 3 1.697 40.989 38.295 1 60.87 ? C31 DZW 501 A 1 
HETATM 32 C C32 DZW . . . C 3 0.285 40.698 38.767 1 63.65 ? C32 DZW 501 A 1 
HETATM 33 O O33 DZW . . . C 3 0.238 40.617 40.195 1 68.02 ? O33 DZW 501 A 1 
HETATM 34 C C34 DZW . . . C 3 -0.196 39.393 38.16 1 62.1 ? C34 DZW 501 A 1 
#
_model_server_stats.io_time_ms              94 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           34 
#