data_6FOF # _model_server_result.job_id InS3E53WT1AhCtD27YEhyw _model_server_result.datetime_utc '2024-11-27 01:34:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":303}' # _entry.id 6FOF # _exptl.entry_id 6FOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FOF _cell.length_a 93.851 _cell.length_b 98.195 _cell.length_c 237.814 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,M,N,O,P,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,WA,XA,YA,ZA 1 1 E,F,G,H,Q,R,S,T,IA,JA,KA,LA,MA,NA,OA,AB,BB,CB,DB 2 1 I,J,K,L,U,V,W,X,PA,QA,RA,SA,TA,UA,VA,EB,FB,GB,HB 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 SA N N ? 3 TA N N ? 3 UA N N ? 3 VA N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n M BGC 1 M 1 BGC C 301 LAT 2 n M GAL 2 M 2 GAL C 301 LAT 2 n N BGC 1 N 1 BGC D 301 LAT 2 n N GAL 2 N 2 GAL D 301 LAT 2 n O BGC 1 O 1 BGC E 301 LAT 2 n O GAL 2 O 2 GAL E 301 LAT 2 n P BGC 1 P 1 BGC G 301 LAT 2 n P GAL 2 P 2 GAL G 301 LAT 2 n Q BGC 1 Q 1 BGC A 301 LAT 2 n Q GAL 2 Q 2 GAL A 301 LAT 2 n R BGC 1 R 1 BGC B 301 LAT 2 n R GAL 2 R 2 GAL B 301 LAT 2 n S BGC 1 S 1 BGC F 301 LAT 2 n S GAL 2 S 2 GAL F 301 LAT 2 n T BGC 1 T 1 BGC H 301 LAT 2 n T GAL 2 T 2 GAL H 301 LAT 2 n U BGC 1 U 1 BGC I 301 LAT 2 n U GAL 2 U 2 GAL I 301 LAT 2 n V BGC 1 V 1 BGC J 301 LAT 2 n V GAL 2 V 2 GAL J 301 LAT 2 n W BGC 1 W 1 BGC K 301 LAT 2 n W GAL 2 W 2 GAL K 301 LAT 2 n X BGC 1 X 1 BGC L 301 LAT 2 n X GAL 2 X 2 GAL L 301 LAT # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 M O4 BGC . M BGC 1 1_555 M C1 GAL . M GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 sing covale ? covale2 N O4 BGC . N BGC 1 1_555 N C1 GAL . N GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.415 sing covale ? covale3 O O4 BGC . O BGC 1 1_555 O C1 GAL . O GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 sing covale ? covale4 P O4 BGC . P BGC 1 1_555 P C1 GAL . P GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 sing covale ? covale5 Q O4 BGC . Q BGC 1 1_555 Q C1 GAL . Q GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 sing covale ? covale6 R O4 BGC . R BGC 1 1_555 R C1 GAL . R GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 sing covale ? covale7 S O4 BGC . S BGC 1 1_555 S C1 GAL . S GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 sing covale ? covale8 T O4 BGC . T BGC 1 1_555 T C1 GAL . T GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.408 sing covale ? covale9 U O4 BGC . U BGC 1 1_555 U C1 GAL . U GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 sing covale ? covale10 V O4 BGC . V BGC 1 1_555 V C1 GAL . V GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.421 sing covale ? covale11 W O4 BGC . W BGC 1 1_555 W C1 GAL . W GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 sing covale ? covale12 X O4 BGC . X BGC 1 1_555 X C1 GAL . X GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.403 sing # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 338 n n S O2 SO4 doub 339 n n S O3 SO4 sing 340 n n S O4 SO4 sing 341 n n # _atom_sites.entry_id 6FOF _atom_sites.fract_transf_matrix[1][1] 0.010655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Y 3 SO4 C 1 302 5 SO4 SO4 . Z 3 SO4 C 1 303 7 SO4 SO4 . AA 3 SO4 C 1 304 11 SO4 SO4 . BA 3 SO4 C 1 305 12 SO4 SO4 . CA 3 SO4 D 1 302 8 SO4 SO4 . DA 3 SO4 D 1 303 10 SO4 SO4 . EA 3 SO4 E 1 302 13 SO4 SO4 . FA 3 SO4 G 1 302 6 SO4 SO4 . GA 3 SO4 G 1 303 9 SO4 SO4 . HA 3 SO4 G 1 304 14 SO4 SO4 . IA 3 SO4 B 1 302 1 SO4 SO4 . JA 3 SO4 B 1 303 15 SO4 SO4 . KA 3 SO4 F 1 302 2 SO4 SO4 . LA 3 SO4 H 1 302 16 SO4 SO4 . MA 3 SO4 H 1 303 17 SO4 SO4 . NA 3 SO4 H 1 304 18 SO4 SO4 . OA 3 SO4 H 1 305 24 SO4 SO4 . PA 3 SO4 I 1 302 4 SO4 SO4 . QA 3 SO4 I 1 303 19 SO4 SO4 . RA 3 SO4 J 1 302 23 SO4 SO4 . SA 3 SO4 K 1 302 3 SO4 SO4 . TA 3 SO4 K 1 303 25 SO4 SO4 . UA 3 SO4 K 1 304 26 SO4 SO4 . VA 3 SO4 L 1 302 27 SO4 SO4 . WA 4 HOH C 1 401 43 HOH HOH . WA 4 HOH C 2 402 25 HOH HOH . WA 4 HOH C 3 403 36 HOH HOH . WA 4 HOH C 4 404 37 HOH HOH . WA 4 HOH C 5 405 44 HOH HOH . WA 4 HOH C 6 406 32 HOH HOH . WA 4 HOH C 7 407 55 HOH HOH . WA 4 HOH C 8 408 33 HOH HOH . WA 4 HOH C 9 409 46 HOH HOH . WA 4 HOH C 10 410 41 HOH HOH . WA 4 HOH C 11 411 39 HOH HOH . WA 4 HOH C 12 412 45 HOH HOH . WA 4 HOH C 13 413 38 HOH HOH . WA 4 HOH C 14 414 52 HOH HOH . WA 4 HOH C 15 415 40 HOH HOH . XA 4 HOH D 1 401 34 HOH HOH . XA 4 HOH D 2 402 26 HOH HOH . XA 4 HOH D 3 403 27 HOH HOH . XA 4 HOH D 4 404 35 HOH HOH . XA 4 HOH D 5 405 71 HOH HOH . XA 4 HOH D 6 406 29 HOH HOH . XA 4 HOH D 7 407 30 HOH HOH . XA 4 HOH D 8 408 28 HOH HOH . XA 4 HOH D 9 409 24 HOH HOH . YA 4 HOH E 1 401 50 HOH HOH . YA 4 HOH E 2 402 49 HOH HOH . YA 4 HOH E 3 403 61 HOH HOH . YA 4 HOH E 4 404 51 HOH HOH . YA 4 HOH E 5 405 58 HOH HOH . YA 4 HOH E 6 406 60 HOH HOH . YA 4 HOH E 7 407 54 HOH HOH . YA 4 HOH E 8 408 57 HOH HOH . YA 4 HOH E 9 409 56 HOH HOH . YA 4 HOH E 10 410 47 HOH HOH . YA 4 HOH E 11 411 48 HOH HOH . YA 4 HOH E 12 412 31 HOH HOH . ZA 4 HOH G 1 401 69 HOH HOH . ZA 4 HOH G 2 402 64 HOH HOH . ZA 4 HOH G 3 403 66 HOH HOH . ZA 4 HOH G 4 404 67 HOH HOH . ZA 4 HOH G 5 405 63 HOH HOH . ZA 4 HOH G 6 406 68 HOH HOH . ZA 4 HOH G 7 407 65 HOH HOH . ZA 4 HOH G 8 408 62 HOH HOH . ZA 4 HOH G 9 409 42 HOH HOH . ZA 4 HOH G 10 410 107 HOH HOH . AB 4 HOH A 1 401 6 HOH HOH . AB 4 HOH A 2 402 59 HOH HOH . AB 4 HOH A 3 403 78 HOH HOH . AB 4 HOH A 4 404 3 HOH HOH . AB 4 HOH A 5 405 2 HOH HOH . AB 4 HOH A 6 406 12 HOH HOH . AB 4 HOH A 7 407 1 HOH HOH . AB 4 HOH A 8 408 94 HOH HOH . AB 4 HOH A 9 409 5 HOH HOH . AB 4 HOH A 10 410 53 HOH HOH . AB 4 HOH A 11 411 10 HOH HOH . AB 4 HOH A 12 412 4 HOH HOH . BB 4 HOH B 1 401 77 HOH HOH . BB 4 HOH B 2 402 83 HOH HOH . BB 4 HOH B 3 403 96 HOH HOH . BB 4 HOH B 4 404 75 HOH HOH . BB 4 HOH B 5 405 76 HOH HOH . BB 4 HOH B 6 406 73 HOH HOH . BB 4 HOH B 7 407 70 HOH HOH . BB 4 HOH B 8 408 86 HOH HOH . BB 4 HOH B 9 409 79 HOH HOH . BB 4 HOH B 10 410 74 HOH HOH . BB 4 HOH B 11 411 85 HOH HOH . BB 4 HOH B 12 412 84 HOH HOH . BB 4 HOH B 13 413 16 HOH HOH . BB 4 HOH B 14 414 17 HOH HOH . BB 4 HOH B 15 415 72 HOH HOH . BB 4 HOH B 16 416 81 HOH HOH . CB 4 HOH F 1 401 8 HOH HOH . CB 4 HOH F 2 402 9 HOH HOH . CB 4 HOH F 3 403 18 HOH HOH . CB 4 HOH F 4 404 11 HOH HOH . CB 4 HOH F 5 405 20 HOH HOH . CB 4 HOH F 6 406 13 HOH HOH . CB 4 HOH F 7 407 19 HOH HOH . CB 4 HOH F 8 408 14 HOH HOH . CB 4 HOH F 9 409 7 HOH HOH . CB 4 HOH F 10 410 22 HOH HOH . CB 4 HOH F 11 411 15 HOH HOH . CB 4 HOH F 12 412 23 HOH HOH . CB 4 HOH F 13 413 21 HOH HOH . DB 4 HOH H 1 401 90 HOH HOH . DB 4 HOH H 2 402 88 HOH HOH . DB 4 HOH H 3 403 95 HOH HOH . DB 4 HOH H 4 404 80 HOH HOH . DB 4 HOH H 5 405 91 HOH HOH . DB 4 HOH H 6 406 98 HOH HOH . DB 4 HOH H 7 407 87 HOH HOH . DB 4 HOH H 8 408 93 HOH HOH . DB 4 HOH H 9 409 89 HOH HOH . DB 4 HOH H 10 410 97 HOH HOH . EB 4 HOH I 1 401 101 HOH HOH . EB 4 HOH I 2 402 99 HOH HOH . EB 4 HOH I 3 403 103 HOH HOH . EB 4 HOH I 4 404 104 HOH HOH . EB 4 HOH I 5 405 108 HOH HOH . EB 4 HOH I 6 406 111 HOH HOH . EB 4 HOH I 7 407 110 HOH HOH . EB 4 HOH I 8 408 109 HOH HOH . FB 4 HOH J 1 401 82 HOH HOH . FB 4 HOH J 2 402 139 HOH HOH . FB 4 HOH J 3 403 137 HOH HOH . FB 4 HOH J 4 404 92 HOH HOH . FB 4 HOH J 5 405 105 HOH HOH . FB 4 HOH J 6 406 138 HOH HOH . FB 4 HOH J 7 407 102 HOH HOH . FB 4 HOH J 8 408 100 HOH HOH . FB 4 HOH J 9 409 140 HOH HOH . GB 4 HOH K 1 401 146 HOH HOH . GB 4 HOH K 2 402 141 HOH HOH . GB 4 HOH K 3 403 147 HOH HOH . GB 4 HOH K 4 404 145 HOH HOH . GB 4 HOH K 5 405 142 HOH HOH . GB 4 HOH K 6 406 149 HOH HOH . GB 4 HOH K 7 407 144 HOH HOH . GB 4 HOH K 8 408 143 HOH HOH . GB 4 HOH K 9 409 148 HOH HOH . HB 4 HOH L 1 401 153 HOH HOH . HB 4 HOH L 2 402 152 HOH HOH . HB 4 HOH L 3 403 106 HOH HOH . HB 4 HOH L 4 404 151 HOH HOH . HB 4 HOH L 5 405 150 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . DA 3 5.637 -10.645 271.609 1 66.09 ? S SO4 303 D 1 HETATM 2 O O1 SO4 . . . DA 3 7.049 -10.546 271.168 1 75.93 ? O1 SO4 303 D 1 HETATM 3 O O2 SO4 . . . DA 3 4.903 -9.674 270.792 1 66.23 ? O2 SO4 303 D 1 HETATM 4 O O3 SO4 . . . DA 3 5.199 -12.041 271.378 1 57.18 ? O3 SO4 303 D 1 HETATM 5 O O4 SO4 . . . DA 3 5.467 -10.343 273.057 1 61.02 ? O4 SO4 303 D 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #