data_6FP4 # _model_server_result.job_id 9l4YqnDWpBClh9Yvibb-0Q _model_server_result.datetime_utc '2025-01-10 14:38:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fp4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 6FP4 # _exptl.entry_id 6FP4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.78 _cell.angle_gamma 90 _cell.entry_id 6FP4 _cell.length_a 142.316 _cell.length_b 101.584 _cell.length_c 58.783 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FP4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_757 -x+2,y,-z+2 -1 0 0 0 1 0 0 0 -1 239.111177 0 108.39566 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 31 A CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 154 A CYS 154 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc1 A OG1 THR 153 A THR 153 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc2 A OD2 ASP 433 A ASP 433 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc3 B O1A FAD . A FAD 601 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 385 n n C1 C2 PGE sing 386 n n C1 H1 PGE sing 387 n n C1 H12 PGE sing 388 n n O1 HO1 PGE sing 389 n n C2 O2 PGE sing 390 n n C2 H2 PGE sing 391 n n C2 H22 PGE sing 392 n n O2 C3 PGE sing 393 n n C3 C4 PGE sing 394 n n C3 H3 PGE sing 395 n n C3 H32 PGE sing 396 n n C4 O3 PGE sing 397 n n C4 H4 PGE sing 398 n n C4 H42 PGE sing 399 n n O4 C6 PGE sing 400 n n O4 HO4 PGE sing 401 n n C6 C5 PGE sing 402 n n C6 H6 PGE sing 403 n n C6 H62 PGE sing 404 n n C5 O3 PGE sing 405 n n C5 H5 PGE sing 406 n n C5 H52 PGE sing 407 n n # _atom_sites.entry_id 6FP4 _atom_sites.fract_transf_matrix[1][1] 0.007027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002951 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 1594 FAD FAD . C 3 PGE A 1 602 1 PGE PGE . D 3 PGE A 1 603 2 PGE PGE . E 4 E1T A 1 604 1 E1T UNL . F 5 NA A 1 605 1 NA NA . G 6 250 A 1 606 1 250 250 . H 7 HOH A 1 701 12 HOH HOH . H 7 HOH A 2 702 116 HOH HOH . H 7 HOH A 3 703 30 HOH HOH . H 7 HOH A 4 704 15 HOH HOH . H 7 HOH A 5 705 27 HOH HOH . H 7 HOH A 6 706 47 HOH HOH . H 7 HOH A 7 707 106 HOH HOH . H 7 HOH A 8 708 60 HOH HOH . H 7 HOH A 9 709 16 HOH HOH . H 7 HOH A 10 710 102 HOH HOH . H 7 HOH A 11 711 17 HOH HOH . H 7 HOH A 12 712 11 HOH HOH . H 7 HOH A 13 713 39 HOH HOH . H 7 HOH A 14 714 111 HOH HOH . H 7 HOH A 15 715 113 HOH HOH . H 7 HOH A 16 716 18 HOH HOH . H 7 HOH A 17 717 7 HOH HOH . H 7 HOH A 18 718 45 HOH HOH . H 7 HOH A 19 719 46 HOH HOH . H 7 HOH A 20 720 34 HOH HOH . H 7 HOH A 21 721 14 HOH HOH . H 7 HOH A 22 722 20 HOH HOH . H 7 HOH A 23 723 33 HOH HOH . H 7 HOH A 24 724 8 HOH HOH . H 7 HOH A 25 725 154 HOH HOH . H 7 HOH A 26 726 5 HOH HOH . H 7 HOH A 27 727 130 HOH HOH . H 7 HOH A 28 728 105 HOH HOH . H 7 HOH A 29 729 1 HOH HOH . H 7 HOH A 30 730 25 HOH HOH . H 7 HOH A 31 731 65 HOH HOH . H 7 HOH A 32 732 94 HOH HOH . H 7 HOH A 33 733 62 HOH HOH . H 7 HOH A 34 734 107 HOH HOH . H 7 HOH A 35 735 42 HOH HOH . H 7 HOH A 36 736 57 HOH HOH . H 7 HOH A 37 737 4 HOH HOH . H 7 HOH A 38 738 137 HOH HOH . H 7 HOH A 39 739 167 HOH HOH . H 7 HOH A 40 740 19 HOH HOH . H 7 HOH A 41 741 104 HOH HOH . H 7 HOH A 42 742 38 HOH HOH . H 7 HOH A 43 743 99 HOH HOH . H 7 HOH A 44 744 75 HOH HOH . H 7 HOH A 45 745 49 HOH HOH . H 7 HOH A 46 746 153 HOH HOH . H 7 HOH A 47 747 85 HOH HOH . H 7 HOH A 48 748 108 HOH HOH . H 7 HOH A 49 749 100 HOH HOH . H 7 HOH A 50 750 41 HOH HOH . H 7 HOH A 51 751 23 HOH HOH . H 7 HOH A 52 752 101 HOH HOH . H 7 HOH A 53 753 120 HOH HOH . H 7 HOH A 54 754 112 HOH HOH . H 7 HOH A 55 755 125 HOH HOH . H 7 HOH A 56 756 157 HOH HOH . H 7 HOH A 57 757 136 HOH HOH . H 7 HOH A 58 758 6 HOH HOH . H 7 HOH A 59 759 56 HOH HOH . H 7 HOH A 60 760 61 HOH HOH . H 7 HOH A 61 761 9 HOH HOH . H 7 HOH A 62 762 48 HOH HOH . H 7 HOH A 63 763 81 HOH HOH . H 7 HOH A 64 764 22 HOH HOH . H 7 HOH A 65 765 98 HOH HOH . H 7 HOH A 66 766 2 HOH HOH . H 7 HOH A 67 767 171 HOH HOH . H 7 HOH A 68 768 95 HOH HOH . H 7 HOH A 69 769 159 HOH HOH . H 7 HOH A 70 770 63 HOH HOH . H 7 HOH A 71 771 118 HOH HOH . H 7 HOH A 72 772 64 HOH HOH . H 7 HOH A 73 773 36 HOH HOH . H 7 HOH A 74 774 74 HOH HOH . H 7 HOH A 75 775 141 HOH HOH . H 7 HOH A 76 776 121 HOH HOH . H 7 HOH A 77 777 145 HOH HOH . H 7 HOH A 78 778 10 HOH HOH . H 7 HOH A 79 779 72 HOH HOH . H 7 HOH A 80 780 71 HOH HOH . H 7 HOH A 81 781 134 HOH HOH . H 7 HOH A 82 782 68 HOH HOH . H 7 HOH A 83 783 50 HOH HOH . H 7 HOH A 84 784 176 HOH HOH . H 7 HOH A 85 785 177 HOH HOH . H 7 HOH A 86 786 52 HOH HOH . H 7 HOH A 87 787 70 HOH HOH . H 7 HOH A 88 788 83 HOH HOH . H 7 HOH A 89 789 87 HOH HOH . H 7 HOH A 90 790 88 HOH HOH . H 7 HOH A 91 791 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 3 141.178 30.251 53.244 1 82.86 ? C1 PGE 603 A 1 HETATM 2 O O1 PGE . . . D 3 141.835 29.227 52.551 1 78.56 ? O1 PGE 603 A 1 HETATM 3 C C2 PGE . . . D 3 142.206 31.049 54.04 1 87.4 ? C2 PGE 603 A 1 HETATM 4 O O2 PGE . . . D 3 141.664 32.286 54.407 1 91.43 ? O2 PGE 603 A 1 HETATM 5 C C3 PGE . . . D 3 142.606 33.192 54.911 1 91.39 ? C3 PGE 603 A 1 HETATM 6 C C4 PGE . . . D 3 141.918 34.512 55.252 1 87.43 ? C4 PGE 603 A 1 HETATM 7 O O4 PGE . . . D 3 140.534 37.028 58.586 1 82.49 ? O4 PGE 603 A 1 HETATM 8 C C6 PGE . . . D 3 141.29 35.921 58.179 1 81.99 ? C6 PGE 603 A 1 HETATM 9 C C5 PGE . . . D 3 141.911 36.24 56.823 1 81.99 ? C5 PGE 603 A 1 HETATM 10 O O3 PGE . . . D 3 142.581 35.118 56.327 1 83.85 ? O3 PGE 603 A 1 HETATM 11 H H1 PGE . . . D 3 140.729 30.835 52.613 1 99.43 ? H1 PGE 603 A 1 HETATM 12 H H12 PGE . . . D 3 140.528 29.863 53.851 1 99.43 ? H12 PGE 603 A 1 HETATM 13 H HO1 PGE . . . D 3 141.287 28.842 52.029 1 94.27 ? HO1 PGE 603 A 1 HETATM 14 H H2 PGE . . . D 3 142.997 31.197 53.498 1 104.88 ? H2 PGE 603 A 1 HETATM 15 H H22 PGE . . . D 3 142.459 30.557 54.837 1 104.88 ? H22 PGE 603 A 1 HETATM 16 H H3 PGE . . . D 3 143.001 32.822 55.716 1 109.66 ? H3 PGE 603 A 1 HETATM 17 H H32 PGE . . . D 3 143.301 33.346 54.251 1 109.66 ? H32 PGE 603 A 1 HETATM 18 H H4 PGE . . . D 3 140.998 34.336 55.505 1 104.91 ? H4 PGE 603 A 1 HETATM 19 H H42 PGE . . . D 3 141.934 35.1 54.481 1 104.91 ? H42 PGE 603 A 1 HETATM 20 H HO4 PGE . . . D 3 140.166 36.86 59.333 1 98.99 ? HO4 PGE 603 A 1 HETATM 21 H H6 PGE . . . D 3 140.714 35.144 58.102 1 98.39 ? H6 PGE 603 A 1 HETATM 22 H H62 PGE . . . D 3 141.991 35.752 58.828 1 98.39 ? H62 PGE 603 A 1 HETATM 23 H H5 PGE . . . D 3 142.544 36.968 56.929 1 98.39 ? H5 PGE 603 A 1 HETATM 24 H H52 PGE . . . D 3 141.219 36.506 56.198 1 98.39 ? H52 PGE 603 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #