data_6FP4
#
_model_server_result.job_id            Zx0N4u7GoV1xkVOTpzHUFA 
_model_server_result.datetime_utc      '2025-01-10 15:01:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6fp4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":604}' 
#
_entry.id    6FP4 
#
_exptl.entry_id    6FP4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              174.156 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,8-naphthyridine-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.78 
_cell.angle_gamma         90 
_cell.entry_id            6FP4 
_cell.length_a            142.316 
_cell.length_b            101.584 
_cell.length_c            58.783 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6FP4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_757 -x+2,y,-z+2 -1 0 0 0 1 0 0 0 -1 239.111177 0 108.39566 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 31 A CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 154 A CYS 154 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? 
metalc ? metalc1 A OG1 THR 153 A THR 153 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? 
metalc ? metalc2 A OD2 ASP 433 A ASP 433 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc3 B O1A FAD . A FAD 601 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? 
#
_chem_comp.formula           'C9 H6 N2 O2' 
_chem_comp.formula_weight    174.156 
_chem_comp.id                E1T 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,8-naphthyridine-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C7 C8 E1T doub 120 n y 
C7 C5 E1T sing 121 n y 
C8 N2 E1T sing 122 n y 
C5 C1 E1T doub 123 n y 
N2 C2 E1T doub 124 n y 
C1 C2 E1T sing 125 n y 
C1 C3 E1T sing 126 n y 
C2 N1 E1T sing 127 n y 
C3 C6 E1T doub 128 n y 
N1 C4 E1T doub 129 n y 
C6 C4 E1T sing 130 n y 
C4 C9 E1T sing 131 n n 
C9 O1 E1T doub 132 n n 
C9 O2 E1T sing 133 n n 
C3 H1 E1T sing 134 n n 
C5 H2 E1T sing 135 n n 
C6 H3 E1T sing 136 n n 
C7 H4 E1T sing 137 n n 
C8 H5 E1T sing 138 n n 
O2 H6 E1T sing 139 n n 
#
_atom_sites.entry_id                     6FP4 
_atom_sites.fract_transf_matrix[1][1]    0.007027 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002951 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009844 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018451 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FAD A 1 601 1594 FAD FAD . 
C 3 PGE A 1 602 1 PGE PGE . 
D 3 PGE A 1 603 2 PGE PGE . 
E 4 E1T A 1 604 1 E1T UNL . 
F 5 NA A 1 605 1 NA NA . 
G 6 250 A 1 606 1 250 250 . 
H 7 HOH A 1 701 12 HOH HOH . 
H 7 HOH A 2 702 116 HOH HOH . 
H 7 HOH A 3 703 30 HOH HOH . 
H 7 HOH A 4 704 15 HOH HOH . 
H 7 HOH A 5 705 27 HOH HOH . 
H 7 HOH A 6 706 47 HOH HOH . 
H 7 HOH A 7 707 106 HOH HOH . 
H 7 HOH A 8 708 60 HOH HOH . 
H 7 HOH A 9 709 16 HOH HOH . 
H 7 HOH A 10 710 102 HOH HOH . 
H 7 HOH A 11 711 17 HOH HOH . 
H 7 HOH A 12 712 11 HOH HOH . 
H 7 HOH A 13 713 39 HOH HOH . 
H 7 HOH A 14 714 111 HOH HOH . 
H 7 HOH A 15 715 113 HOH HOH . 
H 7 HOH A 16 716 18 HOH HOH . 
H 7 HOH A 17 717 7 HOH HOH . 
H 7 HOH A 18 718 45 HOH HOH . 
H 7 HOH A 19 719 46 HOH HOH . 
H 7 HOH A 20 720 34 HOH HOH . 
H 7 HOH A 21 721 14 HOH HOH . 
H 7 HOH A 22 722 20 HOH HOH . 
H 7 HOH A 23 723 33 HOH HOH . 
H 7 HOH A 24 724 8 HOH HOH . 
H 7 HOH A 25 725 154 HOH HOH . 
H 7 HOH A 26 726 5 HOH HOH . 
H 7 HOH A 27 727 130 HOH HOH . 
H 7 HOH A 28 728 105 HOH HOH . 
H 7 HOH A 29 729 1 HOH HOH . 
H 7 HOH A 30 730 25 HOH HOH . 
H 7 HOH A 31 731 65 HOH HOH . 
H 7 HOH A 32 732 94 HOH HOH . 
H 7 HOH A 33 733 62 HOH HOH . 
H 7 HOH A 34 734 107 HOH HOH . 
H 7 HOH A 35 735 42 HOH HOH . 
H 7 HOH A 36 736 57 HOH HOH . 
H 7 HOH A 37 737 4 HOH HOH . 
H 7 HOH A 38 738 137 HOH HOH . 
H 7 HOH A 39 739 167 HOH HOH . 
H 7 HOH A 40 740 19 HOH HOH . 
H 7 HOH A 41 741 104 HOH HOH . 
H 7 HOH A 42 742 38 HOH HOH . 
H 7 HOH A 43 743 99 HOH HOH . 
H 7 HOH A 44 744 75 HOH HOH . 
H 7 HOH A 45 745 49 HOH HOH . 
H 7 HOH A 46 746 153 HOH HOH . 
H 7 HOH A 47 747 85 HOH HOH . 
H 7 HOH A 48 748 108 HOH HOH . 
H 7 HOH A 49 749 100 HOH HOH . 
H 7 HOH A 50 750 41 HOH HOH . 
H 7 HOH A 51 751 23 HOH HOH . 
H 7 HOH A 52 752 101 HOH HOH . 
H 7 HOH A 53 753 120 HOH HOH . 
H 7 HOH A 54 754 112 HOH HOH . 
H 7 HOH A 55 755 125 HOH HOH . 
H 7 HOH A 56 756 157 HOH HOH . 
H 7 HOH A 57 757 136 HOH HOH . 
H 7 HOH A 58 758 6 HOH HOH . 
H 7 HOH A 59 759 56 HOH HOH . 
H 7 HOH A 60 760 61 HOH HOH . 
H 7 HOH A 61 761 9 HOH HOH . 
H 7 HOH A 62 762 48 HOH HOH . 
H 7 HOH A 63 763 81 HOH HOH . 
H 7 HOH A 64 764 22 HOH HOH . 
H 7 HOH A 65 765 98 HOH HOH . 
H 7 HOH A 66 766 2 HOH HOH . 
H 7 HOH A 67 767 171 HOH HOH . 
H 7 HOH A 68 768 95 HOH HOH . 
H 7 HOH A 69 769 159 HOH HOH . 
H 7 HOH A 70 770 63 HOH HOH . 
H 7 HOH A 71 771 118 HOH HOH . 
H 7 HOH A 72 772 64 HOH HOH . 
H 7 HOH A 73 773 36 HOH HOH . 
H 7 HOH A 74 774 74 HOH HOH . 
H 7 HOH A 75 775 141 HOH HOH . 
H 7 HOH A 76 776 121 HOH HOH . 
H 7 HOH A 77 777 145 HOH HOH . 
H 7 HOH A 78 778 10 HOH HOH . 
H 7 HOH A 79 779 72 HOH HOH . 
H 7 HOH A 80 780 71 HOH HOH . 
H 7 HOH A 81 781 134 HOH HOH . 
H 7 HOH A 82 782 68 HOH HOH . 
H 7 HOH A 83 783 50 HOH HOH . 
H 7 HOH A 84 784 176 HOH HOH . 
H 7 HOH A 85 785 177 HOH HOH . 
H 7 HOH A 86 786 52 HOH HOH . 
H 7 HOH A 87 787 70 HOH HOH . 
H 7 HOH A 88 788 83 HOH HOH . 
H 7 HOH A 89 789 87 HOH HOH . 
H 7 HOH A 90 790 88 HOH HOH . 
H 7 HOH A 91 791 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 E1T . . . E 4 128.115 7.886 70.533 1 58.13 ? C1 E1T 604 A 1 
HETATM 2 C C2 E1T . . . E 4 127.105 8.805 70.809 1 60.93 ? C2 E1T 604 A 1 
HETATM 3 C C3 E1T . . . E 4 129.418 8.138 70.944 1 57.16 ? C3 E1T 604 A 1 
HETATM 4 C C4 E1T . . . E 4 128.656 10.199 71.89 1 58.22 ? C4 E1T 604 A 1 
HETATM 5 C C5 E1T . . . E 4 127.817 6.722 69.838 1 55.95 ? C5 E1T 604 A 1 
HETATM 6 C C6 E1T . . . E 4 129.692 9.309 71.633 1 56.96 ? C6 E1T 604 A 1 
HETATM 7 C C7 E1T . . . E 4 126.507 6.499 69.441 1 56.3 ? C7 E1T 604 A 1 
HETATM 8 C C8 E1T . . . E 4 125.528 7.438 69.748 1 58.84 ? C8 E1T 604 A 1 
HETATM 9 C C9 E1T . . . E 4 128.953 11.459 72.632 1 53.23 ? C9 E1T 604 A 1 
HETATM 10 N N1 E1T . . . E 4 127.392 9.944 71.481 1 61.44 ? N1 E1T 604 A 1 
HETATM 11 N N2 E1T . . . E 4 125.836 8.562 70.407 1 61.11 ? N2 E1T 604 A 1 
HETATM 12 O O1 E1T . . . E 4 127.969 12.315 72.883 1 52.26 ? O1 E1T 604 A 1 
HETATM 13 O O2 E1T . . . E 4 130.09 11.695 72.998 1 50.36 ? O2 E1T 604 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           13 
#