data_6FP4 # _model_server_result.job_id KDD32wY0ww_bd8JrMeiIgw _model_server_result.datetime_utc '2025-01-10 14:54:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fp4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":606}' # _entry.id 6FP4 # _exptl.entry_id 6FP4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 268.331 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.78 _cell.angle_gamma 90 _cell.entry_id 6FP4 _cell.length_a 142.316 _cell.length_b 101.584 _cell.length_c 58.783 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FP4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_757 -x+2,y,-z+2 -1 0 0 0 1 0 0 0 -1 239.111177 0 108.39566 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 31 A CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 154 A CYS 154 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? metalc ? metalc1 A OG1 THR 153 A THR 153 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc2 A OD2 ASP 433 A ASP 433 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc3 B O1A FAD . A FAD 601 1_555 F NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? # _chem_comp.formula 'C9 H20 N2 O5 S' _chem_comp.formula_weight 268.331 _chem_comp.id 250 _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-hydroxy-3-[4-(2-hydroxyethyl)piperazin-1-yl]propane-1-sulfonic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 S1 250 doub 1 n n O1 S1 250 doub 2 n n S1 O3 250 sing 3 n n S1 C1 250 sing 4 n n C1 C2 250 sing 5 n n O4 C2 250 sing 6 n n C2 C3 250 sing 7 n n C3 N1 250 sing 8 n n N1 C4 250 sing 9 n n N1 C7 250 sing 10 n n C4 C5 250 sing 11 n n C7 C6 250 sing 12 n n C5 N2 250 sing 13 n n N2 C6 250 sing 14 n n N2 C8 250 sing 15 n n C8 C9 250 sing 16 n n C9 O5 250 sing 17 n n O3 HO3 250 sing 18 n n C1 H11 250 sing 19 n n C1 H12 250 sing 20 n n C2 H2 250 sing 21 n n O4 HO4 250 sing 22 n n C3 H31 250 sing 23 n n C3 H32 250 sing 24 n n C7 H71 250 sing 25 n n C7 H72 250 sing 26 n n C6 H61 250 sing 27 n n C6 H62 250 sing 28 n n C5 H51 250 sing 29 n n C5 H52 250 sing 30 n n C4 H41 250 sing 31 n n C4 H42 250 sing 32 n n C8 H81 250 sing 33 n n C8 H82 250 sing 34 n n C9 H91 250 sing 35 n n C9 H92 250 sing 36 n n O5 HO5 250 sing 37 n n # _atom_sites.entry_id 6FP4 _atom_sites.fract_transf_matrix[1][1] 0.007027 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002951 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 601 1594 FAD FAD . C 3 PGE A 1 602 1 PGE PGE . D 3 PGE A 1 603 2 PGE PGE . E 4 E1T A 1 604 1 E1T UNL . F 5 NA A 1 605 1 NA NA . G 6 250 A 1 606 1 250 250 . H 7 HOH A 1 701 12 HOH HOH . H 7 HOH A 2 702 116 HOH HOH . H 7 HOH A 3 703 30 HOH HOH . H 7 HOH A 4 704 15 HOH HOH . H 7 HOH A 5 705 27 HOH HOH . H 7 HOH A 6 706 47 HOH HOH . H 7 HOH A 7 707 106 HOH HOH . H 7 HOH A 8 708 60 HOH HOH . H 7 HOH A 9 709 16 HOH HOH . H 7 HOH A 10 710 102 HOH HOH . H 7 HOH A 11 711 17 HOH HOH . H 7 HOH A 12 712 11 HOH HOH . H 7 HOH A 13 713 39 HOH HOH . H 7 HOH A 14 714 111 HOH HOH . H 7 HOH A 15 715 113 HOH HOH . H 7 HOH A 16 716 18 HOH HOH . H 7 HOH A 17 717 7 HOH HOH . H 7 HOH A 18 718 45 HOH HOH . H 7 HOH A 19 719 46 HOH HOH . H 7 HOH A 20 720 34 HOH HOH . H 7 HOH A 21 721 14 HOH HOH . H 7 HOH A 22 722 20 HOH HOH . H 7 HOH A 23 723 33 HOH HOH . H 7 HOH A 24 724 8 HOH HOH . H 7 HOH A 25 725 154 HOH HOH . H 7 HOH A 26 726 5 HOH HOH . H 7 HOH A 27 727 130 HOH HOH . H 7 HOH A 28 728 105 HOH HOH . H 7 HOH A 29 729 1 HOH HOH . H 7 HOH A 30 730 25 HOH HOH . H 7 HOH A 31 731 65 HOH HOH . H 7 HOH A 32 732 94 HOH HOH . H 7 HOH A 33 733 62 HOH HOH . H 7 HOH A 34 734 107 HOH HOH . H 7 HOH A 35 735 42 HOH HOH . H 7 HOH A 36 736 57 HOH HOH . H 7 HOH A 37 737 4 HOH HOH . H 7 HOH A 38 738 137 HOH HOH . H 7 HOH A 39 739 167 HOH HOH . H 7 HOH A 40 740 19 HOH HOH . H 7 HOH A 41 741 104 HOH HOH . H 7 HOH A 42 742 38 HOH HOH . H 7 HOH A 43 743 99 HOH HOH . H 7 HOH A 44 744 75 HOH HOH . H 7 HOH A 45 745 49 HOH HOH . H 7 HOH A 46 746 153 HOH HOH . H 7 HOH A 47 747 85 HOH HOH . H 7 HOH A 48 748 108 HOH HOH . H 7 HOH A 49 749 100 HOH HOH . H 7 HOH A 50 750 41 HOH HOH . H 7 HOH A 51 751 23 HOH HOH . H 7 HOH A 52 752 101 HOH HOH . H 7 HOH A 53 753 120 HOH HOH . H 7 HOH A 54 754 112 HOH HOH . H 7 HOH A 55 755 125 HOH HOH . H 7 HOH A 56 756 157 HOH HOH . H 7 HOH A 57 757 136 HOH HOH . H 7 HOH A 58 758 6 HOH HOH . H 7 HOH A 59 759 56 HOH HOH . H 7 HOH A 60 760 61 HOH HOH . H 7 HOH A 61 761 9 HOH HOH . H 7 HOH A 62 762 48 HOH HOH . H 7 HOH A 63 763 81 HOH HOH . H 7 HOH A 64 764 22 HOH HOH . H 7 HOH A 65 765 98 HOH HOH . H 7 HOH A 66 766 2 HOH HOH . H 7 HOH A 67 767 171 HOH HOH . H 7 HOH A 68 768 95 HOH HOH . H 7 HOH A 69 769 159 HOH HOH . H 7 HOH A 70 770 63 HOH HOH . H 7 HOH A 71 771 118 HOH HOH . H 7 HOH A 72 772 64 HOH HOH . H 7 HOH A 73 773 36 HOH HOH . H 7 HOH A 74 774 74 HOH HOH . H 7 HOH A 75 775 141 HOH HOH . H 7 HOH A 76 776 121 HOH HOH . H 7 HOH A 77 777 145 HOH HOH . H 7 HOH A 78 778 10 HOH HOH . H 7 HOH A 79 779 72 HOH HOH . H 7 HOH A 80 780 71 HOH HOH . H 7 HOH A 81 781 134 HOH HOH . H 7 HOH A 82 782 68 HOH HOH . H 7 HOH A 83 783 50 HOH HOH . H 7 HOH A 84 784 176 HOH HOH . H 7 HOH A 85 785 177 HOH HOH . H 7 HOH A 86 786 52 HOH HOH . H 7 HOH A 87 787 70 HOH HOH . H 7 HOH A 88 788 83 HOH HOH . H 7 HOH A 89 789 87 HOH HOH . H 7 HOH A 90 790 88 HOH HOH . H 7 HOH A 91 791 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 250 . . . G 6 123.654 19.538 71.061 1 74.14 ? O1 250 606 A 1 HETATM 2 S S1 250 . . . G 6 125.043 19.204 70.578 1 73.01 ? S1 250 606 A 1 HETATM 3 O O2 250 . . . G 6 125.174 20.158 69.411 1 70.31 ? O2 250 606 A 1 HETATM 4 O O3 250 . . . G 6 126.078 19.486 71.643 1 72.21 ? O3 250 606 A 1 HETATM 5 C C1 250 . . . G 6 125.156 17.47 70.033 1 71.97 ? C1 250 606 A 1 HETATM 6 C C2 250 . . . G 6 126.569 17.119 69.536 1 65.58 ? C2 250 606 A 1 HETATM 7 O O4 250 . . . G 6 126.866 17.868 68.385 1 56.52 ? O4 250 606 A 1 HETATM 8 C C3 250 . . . G 6 126.658 15.619 69.208 1 68.73 ? C3 250 606 A 1 HETATM 9 N N1 250 . . . G 6 126.015 14.818 70.232 1 72.41 ? N1 250 606 A 1 HETATM 10 C C7 250 . . . G 6 125.885 13.434 69.832 1 75.06 ? C7 250 606 A 1 HETATM 11 C C6 250 . . . G 6 125.089 12.638 70.864 1 78.34 ? C6 250 606 A 1 HETATM 12 N N2 250 . . . G 6 125.537 12.847 72.242 1 74.5 ? N2 250 606 A 1 HETATM 13 C C5 250 . . . G 6 125.825 14.221 72.605 1 76.9 ? C5 250 606 A 1 HETATM 14 C C4 250 . . . G 6 126.628 14.957 71.54 1 75.47 ? C4 250 606 A 1 HETATM 15 C C8 250 . . . G 6 124.771 12.197 73.299 1 64.12 ? C8 250 606 A 1 HETATM 16 C C9 250 . . . G 6 123.482 11.519 72.835 1 58.15 ? C9 250 606 A 1 HETATM 17 O O5 250 . . . G 6 122.575 12.471 72.334 1 54.43 ? O5 250 606 A 1 HETATM 18 H H11 250 . . . G 6 124.93 16.889 70.777 1 86.36 ? H11 250 606 A 1 HETATM 19 H H12 250 . . . G 6 124.523 17.323 69.313 1 86.36 ? H12 250 606 A 1 HETATM 20 H H2 250 . . . G 6 127.213 17.332 70.23 1 78.69 ? H2 250 606 A 1 HETATM 21 H HO4 250 . . . G 6 127.692 18.07 68.383 1 67.82 ? HO4 250 606 A 1 HETATM 22 H H31 250 . . . G 6 127.591 15.362 69.143 1 82.48 ? H31 250 606 A 1 HETATM 23 H H32 250 . . . G 6 126.223 15.454 68.356 1 82.48 ? H32 250 606 A 1 HETATM 24 H H71 250 . . . G 6 126.769 13.045 69.745 1 90.07 ? H71 250 606 A 1 HETATM 25 H H72 250 . . . G 6 125.427 13.392 68.978 1 90.07 ? H72 250 606 A 1 HETATM 26 H H61 250 . . . G 6 124.156 12.897 70.801 1 94.01 ? H61 250 606 A 1 HETATM 27 H H62 250 . . . G 6 125.169 11.694 70.654 1 94.01 ? H62 250 606 A 1 HETATM 28 H H51 250 . . . G 6 126.329 14.225 73.434 1 92.28 ? H51 250 606 A 1 HETATM 29 H H52 250 . . . G 6 124.986 14.688 72.741 1 92.28 ? H52 250 606 A 1 HETATM 30 H H41 250 . . . G 6 126.672 15.898 71.771 1 90.57 ? H41 250 606 A 1 HETATM 31 H H42 250 . . . G 6 127.525 14.59 71.51 1 90.57 ? H42 250 606 A 1 HETATM 32 H H81 250 . . . G 6 125.335 11.527 73.717 1 76.95 ? H81 250 606 A 1 HETATM 33 H H82 250 . . . G 6 124.543 12.864 73.965 1 76.95 ? H82 250 606 A 1 HETATM 34 H H91 250 . . . G 6 123.691 10.878 72.138 1 69.78 ? H91 250 606 A 1 HETATM 35 H H92 250 . . . G 6 123.077 11.056 73.585 1 69.78 ? H92 250 606 A 1 HETATM 36 H HO5 250 . . . G 6 121.79 12.145 72.341 1 65.32 ? HO5 250 606 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 36 #