data_6FPL # _model_server_result.job_id PWoMYbGRzGZ5-jAhvnSn8A _model_server_result.datetime_utc '2024-11-07 05:39:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6fpl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6FPL # _exptl.entry_id 6FPL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 444.435 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRACYCLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6FPL _cell.length_a 68.02 _cell.length_b 68.02 _cell.length_c 179.03 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6FPL _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 68.02 68.02 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O11 TAC . A TAC 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc2 B O12 TAC . A TAC 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.901 ? metalc ? metalc3 C MG MG . A MG 302 1_555 J O HOH . A HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 C MG MG . A MG 302 1_555 J O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc5 C MG MG . A MG 302 1_555 J O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? # _chem_comp.formula 'C22 H24 N2 O8' _chem_comp.formula_weight 444.435 _chem_comp.id TAC _chem_comp.mon_nstd_flag . _chem_comp.name TETRACYCLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 TAC doub 277 n n C1 C2 TAC sing 278 n n C1 C1C TAC sing 279 n n C2 C21 TAC sing 280 n n C2 C3 TAC doub 281 n n C21 O21 TAC doub 282 n n C21 N21 TAC sing 283 n n N21 HN21 TAC sing 284 n n N21 HN22 TAC sing 285 n n C3 O3 TAC sing 286 n n C3 C4 TAC sing 287 n n O3 HO3 TAC sing 288 n n C4 N4 TAC sing 289 n n C4 C41 TAC sing 290 n n C4 H4 TAC sing 291 n n N4 C42 TAC sing 292 n n N4 C43 TAC sing 293 n n C42 H421 TAC sing 294 n n C42 H422 TAC sing 295 n n C42 H423 TAC sing 296 n n C43 H431 TAC sing 297 n n C43 H432 TAC sing 298 n n C43 H433 TAC sing 299 n n C41 C5 TAC sing 300 n n C41 C1C TAC sing 301 n n C41 H41 TAC sing 302 n n C5 C51 TAC sing 303 n n C5 H51A TAC sing 304 n n C5 H52 TAC sing 305 n n C51 C6 TAC sing 306 n n C51 C1B TAC sing 307 n n C51 H51 TAC sing 308 n n C6 C62 TAC sing 309 n n C6 O6 TAC sing 310 n n C6 C61 TAC sing 311 n n C62 H621 TAC sing 312 n n C62 H622 TAC sing 313 n n C62 H623 TAC sing 314 n n O6 HO6 TAC sing 315 n n C61 C7 TAC doub 316 n y C61 C1A TAC sing 317 n y C7 C8 TAC sing 318 n y C7 H7 TAC sing 319 n n C8 C9 TAC doub 320 n y C8 H8 TAC sing 321 n n C9 C10 TAC sing 322 n y C9 H9 TAC sing 323 n n C10 O10 TAC sing 324 n n C10 C1A TAC doub 325 n y O10 HO1 TAC sing 326 n n C1A C11 TAC sing 327 n n C11 O11 TAC doub 328 n n C11 C1B TAC sing 329 n n C1B C12 TAC doub 330 n n C12 O12 TAC sing 331 n n C12 C1C TAC sing 332 n n O12 HO2 TAC sing 333 n n C1C O1C TAC sing 334 n n O1C HOC TAC sing 335 n n # _atom_sites.entry_id 6FPL _atom_sites.fract_transf_matrix[1][1] 0.014702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014702 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TAC A 1 301 1209 TAC TAC . C 3 MG A 1 302 1210 MG MG . D 4 CL A 1 303 1211 CL CL . E 4 CL A 1 304 1212 CL CL . F 4 CL A 1 305 1213 CL CL . G 4 CL A 1 306 1214 CL CL . H 4 CL A 1 307 1215 CL CL . I 4 CL A 1 308 1216 CL CL . J 5 HOH A 1 401 2344 HOH HOH . J 5 HOH A 2 402 2310 HOH HOH . J 5 HOH A 3 403 2325 HOH HOH . J 5 HOH A 4 404 2328 HOH HOH . J 5 HOH A 5 405 2346 HOH HOH . J 5 HOH A 6 406 2330 HOH HOH . J 5 HOH A 7 407 2274 HOH HOH . J 5 HOH A 8 408 2324 HOH HOH . J 5 HOH A 9 409 2335 HOH HOH . J 5 HOH A 10 410 2289 HOH HOH . J 5 HOH A 11 411 2296 HOH HOH . J 5 HOH A 12 412 2306 HOH HOH . J 5 HOH A 13 413 2333 HOH HOH . J 5 HOH A 14 414 2240 HOH HOH . J 5 HOH A 15 415 2263 HOH HOH . J 5 HOH A 16 416 2286 HOH HOH . J 5 HOH A 17 417 2295 HOH HOH . J 5 HOH A 18 418 2300 HOH HOH . J 5 HOH A 19 419 2323 HOH HOH . J 5 HOH A 20 420 2232 HOH HOH . J 5 HOH A 21 421 2224 HOH HOH . J 5 HOH A 22 422 2234 HOH HOH . J 5 HOH A 23 423 2298 HOH HOH . J 5 HOH A 24 424 2331 HOH HOH . J 5 HOH A 25 425 2321 HOH HOH . J 5 HOH A 26 426 2332 HOH HOH . J 5 HOH A 27 427 2254 HOH HOH . J 5 HOH A 28 428 2347 HOH HOH . J 5 HOH A 29 429 2308 HOH HOH . J 5 HOH A 30 430 2258 HOH HOH . J 5 HOH A 31 431 2336 HOH HOH . J 5 HOH A 32 432 2242 HOH HOH . J 5 HOH A 33 433 2285 HOH HOH . J 5 HOH A 34 434 2319 HOH HOH . J 5 HOH A 35 435 2315 HOH HOH . J 5 HOH A 36 436 2297 HOH HOH . J 5 HOH A 37 437 2236 HOH HOH . J 5 HOH A 38 438 2326 HOH HOH . J 5 HOH A 39 439 2225 HOH HOH . J 5 HOH A 40 440 2301 HOH HOH . J 5 HOH A 41 441 2318 HOH HOH . J 5 HOH A 42 442 2340 HOH HOH . J 5 HOH A 43 443 2243 HOH HOH . J 5 HOH A 44 444 2245 HOH HOH . J 5 HOH A 45 445 2227 HOH HOH . J 5 HOH A 46 446 2260 HOH HOH . J 5 HOH A 47 447 2339 HOH HOH . J 5 HOH A 48 448 2246 HOH HOH . J 5 HOH A 49 449 2235 HOH HOH . J 5 HOH A 50 450 2338 HOH HOH . J 5 HOH A 51 451 2277 HOH HOH . J 5 HOH A 52 452 2244 HOH HOH . J 5 HOH A 53 453 2320 HOH HOH . J 5 HOH A 54 454 2252 HOH HOH . J 5 HOH A 55 455 2322 HOH HOH . J 5 HOH A 56 456 2313 HOH HOH . J 5 HOH A 57 457 2226 HOH HOH . J 5 HOH A 58 458 2343 HOH HOH . J 5 HOH A 59 459 2279 HOH HOH . J 5 HOH A 60 460 2337 HOH HOH . J 5 HOH A 61 461 2253 HOH HOH . J 5 HOH A 62 462 2262 HOH HOH . J 5 HOH A 63 463 2271 HOH HOH . J 5 HOH A 64 464 2348 HOH HOH . J 5 HOH A 65 465 2311 HOH HOH . J 5 HOH A 66 466 2316 HOH HOH . J 5 HOH A 67 467 2264 HOH HOH . J 5 HOH A 68 468 2239 HOH HOH . J 5 HOH A 69 469 2281 HOH HOH . J 5 HOH A 70 470 2237 HOH HOH . J 5 HOH A 71 471 2317 HOH HOH . J 5 HOH A 72 472 2302 HOH HOH . J 5 HOH A 73 473 2327 HOH HOH . J 5 HOH A 74 474 2312 HOH HOH . J 5 HOH A 75 475 2272 HOH HOH . J 5 HOH A 76 476 2314 HOH HOH . J 5 HOH A 77 477 2247 HOH HOH . J 5 HOH A 78 478 2341 HOH HOH . J 5 HOH A 79 479 2334 HOH HOH . J 5 HOH A 80 480 2288 HOH HOH . J 5 HOH A 81 481 2293 HOH HOH . J 5 HOH A 82 482 2345 HOH HOH . J 5 HOH A 83 483 2342 HOH HOH . J 5 HOH A 84 484 2257 HOH HOH . J 5 HOH A 85 485 2329 HOH HOH . J 5 HOH A 86 486 2276 HOH HOH . J 5 HOH A 87 487 2275 HOH HOH . J 5 HOH A 88 488 2259 HOH HOH . J 5 HOH A 89 489 2231 HOH HOH . J 5 HOH A 90 490 2307 HOH HOH . J 5 HOH A 91 491 2290 HOH HOH . J 5 HOH A 92 492 2265 HOH HOH . J 5 HOH A 93 493 2305 HOH HOH . J 5 HOH A 94 494 2248 HOH HOH . J 5 HOH A 95 495 2309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TAC . . . B 2 19.476 34.026 33.817 1 32.19 ? C1 TAC 301 A 1 HETATM 2 O O1 TAC . . . B 2 18.796 34.558 32.91 1 32.79 ? O1 TAC 301 A 1 HETATM 3 C C2 TAC . . . B 2 18.958 32.931 34.609 1 30.01 ? C2 TAC 301 A 1 HETATM 4 C C21 TAC . . . B 2 17.691 32.245 34.211 1 34.61 ? C21 TAC 301 A 1 HETATM 5 O O21 TAC . . . B 2 17.169 31.37 34.945 1 37.2 ? O21 TAC 301 A 1 HETATM 6 N N21 TAC . . . B 2 17.098 32.588 33.042 1 36.36 ? N21 TAC 301 A 1 HETATM 7 C C3 TAC . . . B 2 19.651 32.596 35.731 1 30.46 ? C3 TAC 301 A 1 HETATM 8 O O3 TAC . . . B 2 19.43 31.44 36.322 1 34.23 ? O3 TAC 301 A 1 HETATM 9 C C4 TAC . . . B 2 20.573 33.534 36.465 1 30.85 ? C4 TAC 301 A 1 HETATM 10 N N4 TAC . . . B 2 21.616 32.733 37.18 1 31.85 ? N4 TAC 301 A 1 HETATM 11 C C42 TAC . . . B 2 22.395 33.58 38.129 1 32.44 ? C42 TAC 301 A 1 HETATM 12 C C43 TAC . . . B 2 22.645 32.054 36.304 1 31.85 ? C43 TAC 301 A 1 HETATM 13 C C41 TAC . . . B 2 21.078 34.71 35.598 1 29.97 ? C41 TAC 301 A 1 HETATM 14 C C5 TAC . . . B 2 20.272 35.981 35.977 1 28.9 ? C5 TAC 301 A 1 HETATM 15 C C51 TAC . . . B 2 20.848 37.154 35.246 1 29.63 ? C51 TAC 301 A 1 HETATM 16 C C6 TAC . . . B 2 19.842 38.342 35.352 1 32.72 ? C6 TAC 301 A 1 HETATM 17 C C62 TAC . . . B 2 19.29 38.654 36.767 1 33.8 ? C62 TAC 301 A 1 HETATM 18 O O6 TAC . . . B 2 18.696 37.993 34.543 1 35.26 ? O6 TAC 301 A 1 HETATM 19 C C61 TAC . . . B 2 20.462 39.535 34.718 1 34.75 ? C61 TAC 301 A 1 HETATM 20 C C7 TAC . . . B 2 20.12 40.834 35.131 1 33.3 ? C7 TAC 301 A 1 HETATM 21 C C8 TAC . . . B 2 20.671 41.95 34.482 1 34.64 ? C8 TAC 301 A 1 HETATM 22 C C9 TAC . . . B 2 21.491 41.824 33.401 1 36.22 ? C9 TAC 301 A 1 HETATM 23 C C10 TAC . . . B 2 21.877 40.549 32.963 1 35.33 ? C10 TAC 301 A 1 HETATM 24 O O10 TAC . . . B 2 22.66 40.412 31.897 1 34.69 ? O10 TAC 301 A 1 HETATM 25 C C1A TAC . . . B 2 21.341 39.358 33.57 1 31.69 ? C1A TAC 301 A 1 HETATM 26 C C11 TAC . . . B 2 21.668 38.009 32.993 1 32.38 ? C11 TAC 301 A 1 HETATM 27 O O11 TAC . . . B 2 22.222 37.986 31.878 1 31.87 ? O11 TAC 301 A 1 HETATM 28 C C1B TAC . . . B 2 21.252 36.884 33.787 1 28.84 ? C1B TAC 301 A 1 HETATM 29 C C12 TAC . . . B 2 21.364 35.592 33.297 1 29.95 ? C12 TAC 301 A 1 HETATM 30 O O12 TAC . . . B 2 21.819 35.355 32.094 1 30.41 ? O12 TAC 301 A 1 HETATM 31 C C1C TAC . . . B 2 20.924 34.418 34.103 1 30.63 ? C1C TAC 301 A 1 HETATM 32 O O1C TAC . . . B 2 21.785 33.343 33.712 1 30.64 ? O1C TAC 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 32 #